MiMeDB: Host and Site

Metabolites
Microbes

Metabolite ID	Name	Formula MW	Host & Biospecimen (status - Q; D; E; P)	# Related Microbes	Metabolite Type	Additional sources
MMDBc0049861	2-Methylmaleate	C₅H₆O₄ 130.0987	Human Feces Human Urine Human Blood	27	Co-metabolite	Not Available
MMDBc0049862	Precorrin 3 A	C₄₃H₅₀N₄O₁₆ 878.885	Human Feces	44	Co-metabolite	Not Available
MMDBc0049864	Piperideine	C₅H₉N 83.134	Human Feces Human Blood	38	Co-metabolite	Not Available
MMDBc0049865	Isoprene	C₅H₈ 68.117	Human Feces	6	Co-metabolite	Not Available
MMDBc0049866	Precorrin 5	C₄₅H₅₄N₄O₁₇ 922.938	Human Feces	319	Co-metabolite	Not Available
MMDBc0049867	Precorrin 4	C₄₄H₅₂N₄O₁₇ 908.911	Human Feces	329	Co-metabolite	Not Available
MMDBc0049868	N6-Acetyl-LL-2,6-diaminoheptanedioate	C₉H₁₄N₂O₅ 230.221	Human Feces	451	Co-metabolite	Not Available
MMDBc0049869	N_Acetyl_L_2_amino_6_oxopimelate	C₉H₁₁NO₆ 229.189	Human Feces	405	Co-metabolite	Not Available
MMDBc0049870	N-Acetyl-L-citrulline	C₈H₁₅N₃O₄ 217.2224	Human Feces	746	Co-metabolite	Not Available
MMDBc0049875	O-Acetyl-L-serine	C₅H₉NO₄ 147.1293	Human Feces Human Urine Human Prostate	849	Co-metabolite	Not Available
MMDBc0049876	Acetyl phosphate	C₂H₅O₅P 140.0319	Human Feces Human Placenta	1145	Co-metabolite	Not Available
MMDBc0049878	4-Hydroxyphenylacetyl-CoA	C₂₉H₄₂N₇O₁₈P₃S 901.666	Human Feces	46	Co-metabolite	Not Available
MMDBc0049879	Glutaconoyl-CoA	C₂₆H₄₀N₇O₁₉P₃S 879.62	Human Feces	33	Co-metabolite	Not Available
MMDBc0049880	2-Hydroxyglutaryl-CoA	C₂₆H₄₂N₇O₂₀P₃S 897.63	Human Feces	33	Co-metabolite	Not Available
MMDBc0049881	4-Hydroxybutyryl-CoA	C₂₅H₄₂N₇O₁₈P₃S 853.62	Human Feces	65	Co-metabolite	Not Available
MMDBc0049883	3-Carboxy-3-hydroxy-4-methylpentanoate	C₇H₁₂O₅ 176.1672	Human Feces Human Saliva	669	Co-metabolite	Not Available
MMDBc0049884	3-Carboxy-2-hydroxy-4-methylpentanoate	C₇H₁₂O₅ 176.1672	Human Feces	668	Co-metabolite	Not Available
MMDBc0049885	3-Carboxy-4-methyl-2-oxopentanoate	C₇H₁₀O₅ 174.1513	Human Feces	725	Co-metabolite	Not Available
MMDBc0049886	Prephytoene diphosphate	C₄₀H₆₈O₇P₂ 722.9112	Human Feces	127	Co-metabolite	Not Available
MMDBc0049887	Phytoene	C₄₀H₆₄ 544.9362	Human Feces Human Blood Human Breast Milk	127	Co-metabolite	Not Available
MMDBc0049888	2-Isopropylmaleate	C₇H₁₀O₄ 158.1519	Human Feces	665	Co-metabolite	Not Available
MMDBc0049889	2-Methyl-1-hydroxypropyl-TPP	C₁₆H₂₇N₄O₈P₂S 497.42	Human Feces	150	Co-metabolite	Not Available
MMDBc0049892	3-Methyl-1-hydroxybutyl-TPP	C₁₇H₂₉N₄O₈P₂S 511.447	Human Feces	150	Co-metabolite	Not Available
MMDBc0049894	Demethylphylloquinone	C₃₀H₄₄O₂ 436.68	Human Feces	449	Co-metabolite	Not Available
MMDBc0049895	Phytyl diphosphate	C₂₀H₄₂O₇P₂ 456.4908	Human Feces	12	Co-metabolite	Not Available

Microbe ID	Organism	Kindgom	Phylum	Oxygen preference	Energy production	Host and body site	Pathogenicity and disease	# Related metabolites
MMDBm0375749	Abelson murine leukemia virus	Pararnavirae	Artverviricota	Not Available	Not Available	Not Available	Non-pathogenic	0
MMDBm0785737	Abiotrophia	Eubacteria	Firmicutes	Not Available	Not Available	Human Gingiva Human Large intestine	Pathogenic	0
MMDBm0785738	Abiotrophia defectiva	Eubacteria	Firmicutes	Facultative anaerobe	Saccharolytic, fermentative or respiratory	Human Human Lung	Pathogenic	5
MMDBm0785739	Abiotrophia defectiva ATCC 49176	Eubacteria	Firmicutes	Facultative anaerobe	Saccharolytic, fermentative or respiratory	Human Gut Human Lung	Non-pathogenic	610
MMDBm0808511	Absicoccus porci	Eubacteria	Firmicutes	Anaerobic	Fermentative	Not Available	Non-pathogenic	0
MMDBm0000643	Absiella dolichum	Eubacteria	Firmicutes	Not Available	Not Available	Human Large intestine	Pathogenic	30
MMDBm0808535	Absiella dolichum DSM 3991	Eubacteria	Firmicutes	Obligate anaerobe	Saccharolytic, fermentative	Human Gut	Non-pathogenic	507
MMDBm0774511	Abyssicoccus albus	Eubacteria	Firmicutes	Not Available	Not Available	Human Skin	Pathogenic	0
MMDBm0382092	Acanthamoeba polyphaga mimivirus	Bamfordvirae	Nucleocytoviricota	Not Available	Not Available	Not Available	Non-pathogenic	35
MMDBm0024946	Acanthostigmella	Fungi	Ascomycota	Not Available	Not Available	Not Available	Non-pathogenic	1
MMDBm0881491	Acanthostigmella sp. CL12082	Fungi	Not Available	Not Available	Not Available	Not Available	Non-pathogenic	1
MMDBm0037488	Acarospora	Fungi	Ascomycota	Not Available	Not Available	Not Available	Non-pathogenic	28
MMDBm0001162	Acaryochloris marina MBIC11017	Eubacteria	Cyanobacteria	Aerobe	Not Available	Not Available	Non-pathogenic	173
MMDBm0072674	Acaulium	Fungi	Ascomycota	Not Available	Not Available	Not Available	Non-pathogenic	6
MMDBm0881278	Acer saccharum	Not Available	Not Available	Not Available	Not Available	Not Available	Non-pathogenic	1
MMDBm0805362	Acetanaerobacterium elongatum	Eubacteria	Firmicutes	Not Available	Not Available	Human Large intestine	Pathogenic	0
MMDBm0805364	Acetanaerobacterium sp.	Eubacteria	Firmicutes	Not Available	Not Available	Human Large intestine	Pathogenic	0
MMDBm0805371	Acetivibrio	Eubacteria	Firmicutes	Not Available	Not Available	Human Large intestine	Pathogenic	0
MMDBm0805372	Acetivibrio ethanolgignens	Eubacteria	Firmicutes	Not Available	Fermentative	Not Available	Non-pathogenic	0
MMDBm0001027	Acetoanaerobium sticklandii	Eubacteria	Firmicutes	Anaerobic	Fermentative	Not Available	Non-pathogenic	16
MMDBm0460618	Acetobacter aceti	Eubacteria	Proteobacteria	Not Available	Not Available	Not Available	Non-pathogenic	11
MMDBm0000349	Acetobacter pasteurianus	Eubacteria	Proteobacteria	Aerobic	Fermentative, Acetic acid production, Methylation	Not Available	Non-pathogenic	20
MMDBm0460648	Acetobacter sp. 46_36	Eubacteria	Proteobacteria	Not Available	Scfa Production	Not Available	Non-pathogenic	0
MMDBm0460821	Acetobacter sp. CAG:977	Eubacteria	Proteobacteria	Not Available	Hydrogenogenic	Not Available	Non-pathogenic	0
MMDBm0000657	Acetobacterium woodii	Eubacteria	Firmicutes	Anaerobic	Acetogenic, Homoacetogenic, Fermentative, Methanogenic, Anaerobic respiration, Sodium-dependent atp synthesis, Electron bifurcation, Hydrogen production, Acetogenic, fermentative, Hydrogen-dependent co2 reduction, Co2-reduction	Not Available	Non-pathogenic	35

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