| MMDBr0006139 | Indole | Indoxyl | cytochrome P450, family 2, subfamily E, polypeptide 1 | Not Available | Miscellaneous | 1 | 0 | VMH |
| MMDBr0006142 | Oxoglutaric acid | Oxoglutaric acid | solute carrier family 22 (organic anion transporter), member 6 | Not Available | Transport, extracellular | 1 | 0 | VMH |
| MMDBr0012717 | Indole | Indoxyl | CYP2E1 | oxidation | Not Available | 0 | 0 | 11808865 |
| MMDBr0012720 | Indoxyl | Indoxyl glucuronide | Not Available | conjugation; phase-II biotransformation; glucuronide-conjugation | Not Available | 0 | 0 | Manually annotated by MiMeDB team |
| MMDBr0012779 | Caffeic acid | 3-(3-Hydroxyphenyl)propanoic acid | Not Available | multistep reaction by bacteria | Not Available | 0 | 0 | 15479001 |
| MMDBr0016636 | Indole | Indoxyl | Indole-3-acetate monooxygenase | Oxygenation | Not Available | 0 | 2 | RHEA |
| MMDBr0016637 | Indole | Indoxyl | Indole-3-acetate monooxygenase | Oxygenation | Not Available | 0 | 2 | RHEA |
| MMDBr0018026 | 2,3-Dihydro-2,3-dihydroxybenzoic acid | 2,3-dihydroxybenzoic acid | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | Dehydrogenation | Not Available | 0 | 1 | PathBank |
| MMDBr0018027 | Nitrate | Nitrite | Respiratory nitrate reductase 1 alpha chain | Reduction | Not Available | 0 | 1 | PathBank |
| MMDBr0018028 | Nitrite | Ammonia | Nitrite reductase (NADH) large subunit | Reduction | Not Available | 0 | 1 | PathBank |
| MMDBr0018029 | Nitrite | Ferricytochrome c | Cytochrome c-552 | Not Available | Not Available | 0 | 1 | PathBank |
| MMDBr0018030 | Carbon dioxide | Hydrogen carbonate | Carbonic anhydrase 1 | Carbonate dehydration (or hydration of CO2) | Not Available | 0 | 1 | PathBank |
| MMDBr0018031 | Hydrogen carbonate | Carbamic acid | Cyanate hydratase | Hydration/dehydration of C-O bond | Not Available | 0 | 1 | PathBank |
| MMDBr0018032 | Carbon dioxide | Carbamic acid | Carbamate kinase | Phosphorylation | Not Available | 0 | 1 | PathBank |
| MMDBr0018033 | Isochorismate | 2,3-Dihydro-2,3-dihydroxybenzoic acid | Enterobactin synthase component B | Synthesis | Not Available | 0 | 1 | PathBank |
| MMDBr0018034 | 2,3-Dihydro-2,3-dihydroxybenzoic acid | 2,3-dihydroxybenzoic acid | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | Dehydrogenation | Not Available | 0 | 1 | PathBank |
| MMDBr0018035 | S-Adenosylmethionine | S-Adenosylhomocysteine | Malonyl-[acyl-carrier protein] O-methyltransferase | Methylation | Not Available | 0 | 1 | PathBank |
| MMDBr0018036 | Hydrogen Ion | Carbon dioxide | 3-oxoacyl-[acyl-carrier-protein] synthase 1 | Synthesis | Not Available | 0 | 1 | PathBank |
| MMDBr0018037 | Hydrogen Ion | NADP | 3-oxoacyl-[acyl-carrier-protein] reductase FabG | Reduction | Not Available | 0 | 1 | PathBank |
| MMDBr0018038 | NADP | Hydrogen Ion | Enoyl-[acyl-carrier-protein] reductase [NADH] FabI | Reduction | Not Available | 0 | 1 | PathBank |
| MMDBr0018040 | Hydrogen Ion | NADP | 3-oxoacyl-[acyl-carrier-protein] reductase FabG | Reduction | Not Available | 0 | 1 | PathBank |
| MMDBr0018042 | Hydrogen Ion | NADP | Enoyl-[acyl-carrier-protein] reductase [NADH] FabI | Reduction | Not Available | 0 | 1 | PathBank |
| MMDBr0018043 | Water | Methanol | Pimeloyl-[acyl-carrier protein] methyl ester esterase | Hydrolysis of an ester group | Not Available | 0 | 1 | PathBank |
