MiMeDB: Browsing Metabolites

Metabolite Type:	Structure Class:	Host:
Site:	Microbial Metabolism:	Health Outcome:
Biospecimen:	Status in Biospecimen:	Bioactivity:
Exposure Source:

Displaying metabolites 1 - 25 of 27641 in total

Metabolite ID	Name	Molecular Formula Average Mass Monoisotopic Mass	Structure Class	Host and Biospecimen	# Microbes	Metabolite Type	Exposure Sources	Health Effects	Detection Status
MMDBc0000001	Indoxyl sulfate	C₈H₇NO₄S 213.21 213.009578407	Organic sulfuric acids and derivatives	Human Urine Human Blood Human Feces Human Cerebrospinal Fluid (CSF) Human Bone Marrow Human Brain Human Endothelial tissue Human Heart Human Kidney Human Liver Human Skeletal Muscle	0	Co-metabolite	Food, diet (tryptophan-containing foods)	Uremia; Eosinophilic esophagitis; mild cognitive impairment; Uremic toxin; anxiolytic; depressant; cognitive impairment; kidney damage; heart damage; liver damage; nerve/brain damage; atherogenic; Pro-inflammatory; Aryl hydrocarbon receptor; Aryl hydrocarbon receptor; Neurotoxin; Nuclear Factor-κB; Pro-inflammatory; ROS production; ROS production; ROS production; Aryl hydrocarbon receptor; Nuclear Factor-κB; Pro-inflammatory	Detected and Quantified
MMDBc0000002	p-Cresol sulfate	C₇H₈O₄S 188.201 188.014329434	Organic sulfuric acids and derivatives	Human Blood Human Urine Human Saliva Human Feces Human Cerebrospinal Fluid (CSF) Human Placenta	8	Co-metabolite	Food, diet (phenylalanine-containing foods)	Uremia; Eosinophilic esophagitis; mild cognitive impairment; anxiolytic; depressant; cognitive impairment; kidney damage; heart damage; liver damage; nerve/brain damage; atherogenic; Chronic Kidney Disease; Uremic toxin; Aging; Aging; Chronic Kidney Disease; Chronic Kidney Disease; Parkinson's disease; Uremic toxin; Pro-inflammatory; Pro-inflammatory; ROS production; ROS production; Uremic toxin; Pro-inflammatory; ROS production; Uremic toxin	Detected and Quantified
MMDBc0000003	p-Cresol	C₇H₈O 108.1378 108.057514878	Phenols	Human Urine Human Blood Human Feces Human Saliva Human Adipose Tissue Human Fibroblasts	15	Co-metabolite	Fruit	Celiac disease; Crohn's disease; Irritable bowel syndrome; Ulcerative colitis; Uremia; Eosinophilic esophagitis; Crohn's disease; ulcerative colitis; kidney damage; heart damage; liver damage; nerve/brain damage; atherogenic; mosquito attractant; Chronic Kidney Disease; Uremic toxin; Clostridium difficile infection; Uremic toxin; Uremic toxin; Neurotoxin; Uremic toxin; Neurotoxin; Neurotoxin	Detected and Quantified
MMDBc0000004	Indole	C₈H₇N 117.1479 117.057849229	Indoles and derivatives	Human Feces Human Urine Human Saliva Human Blood Human Epidermis Human Fibroblasts Human Intestine Human Neuron	784	Co-metabolite	Coffee	Celiac disease; Crohn's disease; Irritable bowel syndrome; Ulcerative colitis; atherosclerosis; Crohn's disease; ulcerative colitis; Clostridium difficile infection; Aryl hydrocarbon receptor; Anti-inflammatory; Aryl hydrocarbon receptor; Oxidative stress; Phagocytic activity	Detected and Quantified
MMDBc0000005	2-Ketobutyric acid	C₄H₆O₃ 102.0886 102.031694058	Keto acids and derivatives	Human Feces Human Urine Human Blood Human Cerebrospinal Fluid (CSF) Human Saliva	1151	Co-metabolite		Eosinophilic esophagitis	Detected and Quantified
MMDBc0000006	Biotin	C₁₀H₁₆N₂O₃S 244.311 244.088163078	Biotin and derivatives	Human Feces Human Cerebrospinal Fluid (CSF) Human Blood Human Urine Human Saliva Human All Tissues Human Prostate	1425	Co-metabolite	Juice	Acute Lymphoblastic Leukemia; Dementia; Epilepsy; Motor neuron disease; Multiple sclerosis; Eosinophilic esophagitis	Detected and Quantified
MMDBc0000007	Carnosine	C₉H₁₄N₄O₃ 226.2325 226.106590334		Human Feces Human Urine Human Blood Human Saliva Human Brain Human Fibroblasts Human Intestine Human Kidney Human Liver Human Neuron Human Placenta Human Skeletal Muscle	820	Co-metabolite	Not Available	Alzheimer's disease; Alzheimer's disease; Carnosinuria; Eosinophilic esophagitis; Eosinophilic esophagitis; Carnosinuria; Carnosinuria	Detected and Quantified
MMDBc0000008	Adenine	C₅H₅N₅ 135.1267 135.054495185	Imidazopyrimidines	Human Feces Human Saliva Human Cerebrospinal Fluid (CSF) Human Blood Human Urine Human All Tissues Human Placenta Human Prostate	1788	Co-metabolite	Not Available	Alzheimer's disease; Frontotemporal dementia; Meningitis; Meningitis; Tuberculous meningitis; Eosinophilic esophagitis	Detected and Quantified
MMDBc0000009	Taurocholic acid	C₂₆H₄₅NO₇S 515.703 515.291673489		Human Feces Human Urine Human Blood Human Bile Human Fibroblasts Human Intestine Human Liver Human Neuron Human Placenta	210	Co-metabolite	Not Available	Biliary atresia	Detected and Quantified
MMDBc0000010	Butyric acid	C₄H₈O₂ 88.1051 88.0524295	Fatty Acyls	Human Feces Human Urine Human Saliva Human Breath Human Breast Milk Human Blood Human Cerebrospinal Fluid (CSF) Human Fibroblasts Human Intestine Human Kidney Human Neuron Human Prostate Human Skeletal Muscle	778	Co-metabolite	Meat	AIDS; Celiac disease; Crohn's disease; Irritable bowel syndrome; Ulcerative colitis; Eosinophilic esophagitis	Detected and Quantified
MMDBc0000011	Acetic acid	C₂H₄O₂ 60.052 60.021129372	Carboxylic acids and derivatives	Human Cerebrospinal Fluid (CSF) Human Feces Human Saliva Human Breath Human Urine Human Blood Human Breast Milk Human Kidney Human Liver	2537	Co-metabolite	Essential oil	Argininosuccinic aciduria; Celiac disease; Lung Cancer; Maple syrup urine disease; Multiple sclerosis; Phenylketonuria; Propionic acidemia; Tyrosinemia I; Eosinophilic esophagitis	Detected and Quantified
MMDBc0000012	Betaine	C₅H₁₂NO₂ 118.1543 118.086803633	Carboxylic acids and derivatives	Human Feces Human Saliva Human Urine Human Blood Human Breast Milk Human Adipose Tissue Human Adrenal Cortex Human Adrenal Gland Human Bladder Human Epidermis Human Fibroblasts Human Intestine Human Kidney Human Liver Human Ovary Human Pancreas Human Placenta Human Platelet Human Prostate Human Skeletal Muscle Human Spleen Human Testis	1062	Co-metabolite	Not Available	Alzheimer's disease; Argininosuccinic aciduria; Dimethylglycine Dehydrogenase Deficiency; Dimethylglycine Dehydrogenase Deficiency; Frontotemporal dementia; Hypermethioninemia; Lung Cancer; Maple syrup urine disease; Phenylketonuria; Propionic acidemia; Schizophrenia; Eosinophilic esophagitis	Detected and Quantified
MMDBc0000013	Ascorbic acid	C₆H₈O₆ 176.1241 176.032087988	Dihydrofurans	Human Feces Human Blood Human Cerebrospinal Fluid (CSF) Human Urine Human Saliva Human Amniotic Fluid Human Breast Milk Human Cellular Cytoplasm Human Adipose Tissue Human Adrenal Cortex Human Adrenal Medulla Human Bladder Human Brain Human Epidermis Human Erythrocyte Human Eye Lens Human Fibroblasts Human Heart Human Intestine Human Leukocyte Human Liver Human Lung Human Neuron Human Ovary Human Placenta Human Platelet Human Prostate Human Skeletal Muscle Human Spleen Human Testis	37	Co-metabolite	Meat	Canavan disease; Hyperoxalemia; Meningitis; Traumatic brain injury; Eosinophilic esophagitis	Detected and Quantified
MMDBc0000014	Melibiose	C₁₂H₂₂O₁₁ 342.2965 342.116211546		Human Urine Human Spleen Human Blood	87	Co-metabolite		Not Available	Detected and Quantified
MMDBc0000015	Adenosine	C₁₀H₁₃N₅O₄ 267.2413 267.096753929	Purine nucleosides	Human Feces Human Urine Human Saliva Human Blood Human Cerebrospinal Fluid (CSF) Human Cellular Cytoplasm Human Breast Milk Human All Tissues Human Placenta	1619	Co-metabolite		Adenylosuccinate lyase deficiency; Alzheimer's disease; Frontotemporal dementia; Septic shock; Eosinophilic esophagitis	Detected and Quantified
MMDBc0000016	Ammonia	H₃N 17.0305 17.026549101	Homogeneous other non-metal compounds	Human Feces Human Blood Human Urine Human Cellular Cytoplasm Human Cerebrospinal Fluid (CSF) Human All Tissues	1850	Co-metabolite		3-Hydroxy-3-methylglutaryl-CoA lyase deficiency; 3-Hydroxy-3-methylglutaryl-CoA lyase deficiency; 3-Hydroxy-3-methylglutaryl-CoA lyase deficiency; 3-Hydroxy-3-methylglutaryl-CoA lyase deficiency; Argininosuccinic aciduria; Carnitine palmitoyltransferase I deficiency; Citrullinemia type I; Fumarase deficiency; Hyperdibasic aminoaciduria I; Mitochondrial trifunctional protein deficiency; N-acetylglutamate synthetase deficiency; Pyruvate carboxylase deficiency; Short bowel syndrome; 3-Methyl-crotonyl-glycinuria; 3-Methyl-crotonyl-glycinuria; Argininosuccinic aciduria	Detected and Quantified
MMDBc0000017	Cellobiose	C₁₂H₂₂O₁₁ 342.2965 342.116211546	Organooxygen compounds	Human Urine Human Intestine Human Spleen Human Blood	823	Co-metabolite		Not Available	Detected and Quantified
MMDBc0000018	beta-Alanine	C₃H₇NO₂ 89.0932 89.047678473	Carboxylic acids and derivatives	Human Feces Human Saliva Human Cerebrospinal Fluid (CSF) Human Urine Human Blood Human Kidney Human Pancreas Human Placenta Human Prostate Human Skeletal Muscle	1256	Co-metabolite	Fruit	Alzheimer's disease; Dihydropyrimidine dehydrogenase deficiency; Dihydropyrimidine dehydrogenase deficiency; Dihydropyrimidine dehydrogenase deficiency; Frontotemporal dementia; Methylmalonate semialdehyde dehydrogenase deficiency; Eosinophilic esophagitis; Gaba-transaminase deficiency; Gaba-transaminase deficiency; Gaba-transaminase deficiency; Gaba-transaminase deficiency; Hyper beta-alaninemia; Hyper beta-alaninemia; Hyper beta-alaninemia	Detected and Quantified
MMDBc0000019	L-Carnitine	C₇H₁₆NO₃ 162.2068 162.113018383	Organonitrogen compounds	Human Feces Human Blood Human Urine Human Cerebrospinal Fluid (CSF) Human Breast Milk Human Saliva Human Adipose Tissue Human Bladder Human Brain Human Erythrocyte Human Fibroblasts Human Heart Human Intestine Human Kidney Human Liver Human Lung Human Neuron Human Placenta Human Platelet Human Prostate Human Semen Human Skeletal Muscle Human Testis	183	Co-metabolite	Milk	3-Hydroxy-3-methylglutaryl-CoA lyase deficiency; 3-Hydroxy-3-methylglutaryl-CoA lyase deficiency; Carnitine palmitoyltransferase I deficiency; Diabetes mellitus type 2; L-2-Hydroxyglutaric aciduria; L-2-Hydroxyglutaric aciduria; Lung Cancer; Mitochondrial trifunctional protein deficiency; Obesity; Oculocerebrorenal syndrome; Propionic acidemia; Eosinophilic esophagitis; Obesity; Obesity	Detected and Quantified
MMDBc0000020	Cholesterol	C₂₇H₄₆O 386.6535 386.354866094	Steroids and steroid derivatives	Human Feces Human Blood Human Bile Human Cerebrospinal Fluid (CSF) Human Saliva Human All Tissues Human Placenta Human Prostate Human Urine	27	Co-metabolite	Not Available	Abetalipoproteinemia; Acute myelogenous leukemia; Cerebrotendinous xanthomatosis; Cerebrotendinous xanthomatosis; Cholelithiasis; Cholesteryl ester storage disease; Cholesteryl ester storage disease; Cholesteryl ester storage disease; Cystinosis; Cystinosis; Gallbladder disease; Gallbladder disease; Hypercholesterolemia; Hyperlipoproteinemia; Hyperlipoproteinemia; Multiple sclerosis; Oculocerebrorenal syndrome; Primary hypomagnesemia; Smith-Lemli-Opitz syndrome; Smith-Lemli-Opitz syndrome; Stomach cancer; Cholesteryl ester storage disease; Cholesteryl ester storage disease; Cystinosis	Detected and Quantified
MMDBc0000021	cis-Aconitic acid	C₆H₆O₆ 174.1082 174.016437924	Carboxylic acids and derivatives	Human Feces Human Saliva Human Urine Human Cerebrospinal Fluid (CSF) Human Sweat Human Breast Milk Human Prostate Human Blood	11	Co-metabolite	Plant	Alzheimer's disease; Frontotemporal dementia; Lung Cancer; Eosinophilic esophagitis	Detected and Quantified
MMDBc0000022	Dimethylamine	C₂H₇N 45.0837 45.057849229	Organonitrogen compounds	Human Blood Human Urine Human Saliva Human Cerebrospinal Fluid (CSF) Human Feces Human Sweat Human Fibroblasts Human Neuron	119	Co-metabolite	Leaves	Diabetes mellitus type 2; Kidney disease; Rhabdomyolysis; Uremia; Eosinophilic esophagitis; Eosinophilic esophagitis; Diabetes mellitus type 1	Detected and Quantified
MMDBc0000023	Cytidine	C₉H₁₃N₃O₅ 243.2166 243.085520541	Pyrimidine nucleosides	Human Feces Human Saliva Human Blood Human Urine Human Cerebrospinal Fluid (CSF) Human Breast Milk Human All Tissues Human Placenta Human Prostate	1679	Co-metabolite	Not Available	Alzheimer's disease; Canavan disease; Canavan disease; Frontotemporal dementia; Uremia	Detected and Quantified
MMDBc0000024	Citric acid	C₆H₈O₇ 192.1235 192.02700261	Carboxylic acids and derivatives	Human Feces Human Cerebrospinal Fluid (CSF) Human Blood Human Saliva Human Urine Human Breast Milk Human All Tissues Human Placenta Human Prostate Human Sweat	1285	Co-metabolite		2-Ketoglutarate dehydrogenase complex deficiency; 2-Ketoglutarate dehydrogenase complex deficiency; Alzheimer's disease; Argininosuccinic aciduria; Canavan disease; Frontotemporal dementia; Hyperoxalemia; Lung Cancer; Maple syrup urine disease; Paraquat poisoning; Phenylketonuria; Primary hypomagnesemia; Propionic acidemia; Rhabdomyolysis; Tyrosinemia I; Eosinophilic esophagitis; Diabetes mellitus type 1	Detected and Quantified
MMDBc0000025	Choline	C₅H₁₄NO 104.1708 104.107539075	Organonitrogen compounds	Human Feces Human Cerebrospinal Fluid (CSF) Human Saliva Human Blood Human Urine Human Sweat Human Breast Milk Human Basal Ganglia Human Bladder Human Brain Human Epidermis Human Fibroblasts Human Intestine Human Kidney Human Liver Human Neuron Human Placenta Human Platelet Human Prostate Human Skeletal Muscle Human Spleen Human Testis	1144	Co-metabolite	Meat	Alzheimer's disease; Alzheimer's disease; Frontotemporal dementia; Lung Cancer; Multi-infarct dementia; Spina Bifida; Eosinophilic esophagitis	Detected and Quantified

Displaying metabolites 1 - 25 of 27641 in total

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