| MMDBm0098142 | Kluyveromyces lactis NRRL Y-1140 | Fungi | Ascomycota | Not Available | Not Available | RHEA |
| MMDBm0097176 | Cyberlindnera fabianii | Fungi | Ascomycota | Human Feces | Not Available | RHEA |
| MMDBm0098147 | Kluyveromyces marxianus DMKU3-1042 | Fungi | Ascomycota | Not Available | Not Available | RHEA |
| MMDBm0000583 | Saccharomyces cerevisiae | Fungi | Ascomycota | Human Feces | Unknown | YMDB |
| MMDBm0097180 | Cyberlindnera jadinii NRRL Y-1542 | Fungi | Ascomycota | Not Available | Not Available | RHEA |
| MMDBm0097296 | Wickerhamomyces anomalus NRRL Y-366-8 | Fungi | Ascomycota | Not Available | Not Available | RHEA |
| MMDBm0098378 | Saccharomyces cerevisiae S288C | Fungi | Ascomycota | Not Available | Not Available | RHEA |
| MMDBm0000599 | Naumovozyma dairenensis | Fungi | Ascomycota | Human Feces | Microbial culture | Not Available |
| MMDBm0098042 | Eremothecium cymbalariae DBVPG#7215 | Fungi | Ascomycota | Not Available | Not Available | RHEA |
| MMDBm0097304 | Wickerhamomyces ciferrii NRRL Y-1031 | Fungi | Ascomycota | Not Available | Not Available | RHEA |
| MMDBm0099094 | Hanseniaspora uvarum | Fungi | Ascomycota | Human Feces | Not Available | RHEA |
| MMDBm0000583 | Saccharomyces cerevisiae | Fungi | Ascomycota | Human Feces | Microbial culture | Not Available |
| MMDBm0001501 | Cronobacter sakazakii ATCC BAA-894 | Bacteria | Proteobacteria | Human | Metabolic reconstruction | VMH |
| MMDBm0552405 | Trabulsiella guamensis ATCC 49490 | Bacteria | Proteobacteria | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0000361 | Zymomonas mobilis | Bacteria | Proteobacteria | Not Available | Microbial culture | Not Available |
| MMDBm0794814 | Streptococcus peroris ATCC 700780 | Bacteria | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0000619 | Thermoanaerobacterium saccharolyticum | Bacteria | Firmicutes | Not Available | Microbial culture | Not Available |
| MMDBm0784094 | Gemella sanguinis M325 | Bacteria | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0806096 | [Eubacterium] siraeum DSM 15702 | Bacteria | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0730533 | Bacillus nealsonii AAU1 | Bacteria | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0001232 | Arcanobacterium haemolyticum DSM 20595 | Bacteria | Actinobacteria | Human | Metabolic reconstruction | VMH |
| MMDBm0001762 | Lactococcus lactis subsp. lactis Il1403 | Bacteria | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0790389 | Lactiplantibacillus pentosus KCA1 | Bacteria | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0000089 | Bifidobacterium pseudolongum subsp. Pseudolongum DSM 20099 | Bacteria | Actinobacteria | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0002275 | Bifidobacterium breve UCC2003 | Bacteria | Actinobacteria | Human Feces | Metabolic reconstruction | VMH |
