| MMDBm0099094 | Hanseniaspora uvarum | Fungi | Ascomycota | Human Feces | Not Available | RHEA |
| MMDBm0000583 | Saccharomyces cerevisiae | Fungi | Ascomycota | Human Feces | Microbial culture | Not Available |
| MMDBm0098142 | Kluyveromyces lactis NRRL Y-1140 | Fungi | Ascomycota | Not Available | Not Available | RHEA |
| MMDBm0097176 | Cyberlindnera fabianii | Fungi | Ascomycota | Human Feces | Not Available | RHEA |
| MMDBm0098147 | Kluyveromyces marxianus DMKU3-1042 | Fungi | Ascomycota | Not Available | Not Available | RHEA |
| MMDBm0000583 | Saccharomyces cerevisiae | Fungi | Ascomycota | Human Feces | Unknown | YMDB |
| MMDBm0097180 | Cyberlindnera jadinii NRRL Y-1542 | Fungi | Ascomycota | Not Available | Not Available | RHEA |
| MMDBm0097296 | Wickerhamomyces anomalus NRRL Y-366-8 | Fungi | Ascomycota | Not Available | Not Available | RHEA |
| MMDBm0098378 | Saccharomyces cerevisiae S288C | Fungi | Ascomycota | Not Available | Not Available | RHEA |
| MMDBm0000599 | Naumovozyma dairenensis | Fungi | Ascomycota | Human Feces | Microbial culture | Not Available |
| MMDBm0098042 | Eremothecium cymbalariae DBVPG#7215 | Fungi | Ascomycota | Not Available | Not Available | RHEA |
| MMDBm0097304 | Wickerhamomyces ciferrii NRRL Y-1031 | Fungi | Ascomycota | Not Available | Not Available | RHEA |
| MMDBm0000085 | Bifidobacterium longum subsp. longum JDM301 | Bacteria | Actinobacteria | Human | Metabolic reconstruction | VMH |
| MMDBm0000068 | Bifidobacterium bifidum S17 | Bacteria | Actinobacteria | Human | Metabolic reconstruction | VMH |
| MMDBm0557847 | Morganella morganii subsp. morganii KT | Bacteria | Proteobacteria | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0000216 | Megamonas hypermegale ART12/1 | Bacteria | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0798783 | Clostridium butyricum E4 str. BoNT E BL5262 | Bacteria | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0001450 | Citrobacter koseri ATCC BAA-895 | Bacteria | Proteobacteria | Human | Metabolic reconstruction | VMH |
| MMDBm0000201 | Lactobacillus brevis | Bacteria | Firmicutes | Human | Microbial culture | Not Available |
| MMDBm0000257 | Roseburia hominis A2-183 | Bacteria | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0558550 | Providencia stuartii ATCC 25827 | Bacteria | Proteobacteria | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0809587 | Dialister succinatiphilus YIT 11850 | Bacteria | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0724106 | Collinsella intestinalis DSM 13280 | Bacteria | Actinobacteria | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0796542 | Streptococcus sp. 2_1_36FAA | Bacteria | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0000485 | Clostridium clostridioforme | Bacteria | Firmicutes | Human | Microbial culture | Not Available |
