| MMDBm0000015 | Akkermansia muciniphila ATCC BAA-835 | Bacteria | Verrucomicrobia | Human | Metabolic reconstruction | VMH |
| MMDBm0000015 | Akkermansia muciniphila ATCC BAA-835 | Bacteria | Verrucomicrobia | Human | Metabolic reconstruction | VMH |
| MMDBm0000648 | Anaerococcus lactolyticus | Bacteria | Firmicutes | Human | Microbial culture | Not Available |
| MMDBm0810781 | Kallipyga massiliensis ph2 | Bacteria | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0810781 | Kallipyga massiliensis ph2 | Bacteria | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0000571 | Sulfolobus acidocaldarius | Archaea | Crenarchaeota | Not Available | Microbial culture | Not Available |
| MMDBm0002641 | Sulfolobus solfataricus P2 | Archaea | Crenarchaeota | Not Available | Metabolic reconstruction | VMH |
| MMDBm0000572 | Saccharolobus solfataricus | Archaea | Crenarchaeota | Human Feces | Not Available | RHEA |
| MMDBm0002641 | Sulfolobus solfataricus P2 | Archaea | Crenarchaeota | Not Available | Metabolic reconstruction | VMH |
| MMDBm0000771 | Picrophilus torridus | Archaea | Euryarchaeota | Not Available | Microbial culture | Not Available |
| MMDBm0001955 | Picrophilus torridus DSM 9790 | Archaea | Euryarchaeota | Not Available | Not Available | RHEA |
| MMDBm0002701 | Thermoplasma acidophilum DSM 1728 | Archaea | Euryarchaeota | Not Available | Not Available | RHEA |
| MMDBm0000531 | Sphaerobacter thermophilus | Bacteria | Chloroflexi | Not Available | Microbial culture | Not Available |
| MMDBm0000310 | Treponema bryantii | Bacteria | Spirochaetes | Not Available | Microbial culture | Not Available |
| MMDBm0641709 | Brachyspira pilosicoli B2904 | Bacteria | Spirochaetes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0000781 | Brachyspira intermedia | Bacteria | Spirochaetes | Not Available | Microbial culture | Not Available |
| MMDBm0641709 | Brachyspira pilosicoli B2904 | Bacteria | Spirochaetes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0001089 | Treponema succinifaciens | Bacteria | Spirochaetes | Not Available | Microbial culture | Not Available |
| MMDBm0002724 | Treponema denticola ATCC 35405 | Bacteria | Spirochaetes | Human | Not Available | RHEA |
| MMDBm0002723 | Treponema pallidum subsp. pallidum str. Nichols | Bacteria | Spirochaetes | Human | Not Available | RHEA |
| MMDBm0064153 | Fusarium graminearum | Fungi | Ascomycota | Human Feces | Not Available | RHEA |
| MMDBm0064156 | Fusarium graminearum PH-1 | Fungi | Ascomycota | Not Available | Not Available | RHEA |
| MMDBm0084811 | Microdochium nivale | Fungi | Ascomycota | Not Available | Not Available | RHEA |
| MMDBm0001007 | Tetrapisispora blattae | Fungi | Ascomycota | Human Feces | Microbial culture | Not Available |
| MMDBm0000690 | Candida dubliniensis | Fungi | Ascomycota | Human Feces | Microbial culture | Not Available |
