| MMDBm0015195 | Parastagonospora nodorum SN15 | Fungi | Ascomycota | Not Available | Not Available | RHEA |
| MMDBm0036372 | Nannizzia gypsea CBS 118893 | Fungi | Ascomycota | Not Available | Not Available | RHEA |
| MMDBm0082238 | Sordaria macrospora k-hell | Fungi | Ascomycota | Not Available | Not Available | RHEA |
| MMDBm0063397 | Fusarium fujikuroi | Fungi | Ascomycota | Human Feces | Not Available | RHEA |
| MMDBm0147764 | Phaffia rhodozyma | Fungi | Basidiomycota | Human Feces | Not Available | RHEA |
| MMDBm0028954 | Aspergillus niger CBS 513.88 | Fungi | Ascomycota | Not Available | Not Available | RHEA |
| MMDBm0156256 | Sporisorium reilianum SRZ2 | Fungi | Basidiomycota | Not Available | Not Available | RHEA |
| MMDBm0014526 | Leptosphaeria maculans JN3 | Fungi | Ascomycota | Not Available | Not Available | RHEA |
| MMDBm0000583 | Saccharomyces cerevisiae | Fungi | Ascomycota | Human Feces | Unknown | YMDB |
| MMDBm0164185 | Phycomyces blakesleeanus NRRL 1555(-) | Fungi | Mucoromycota | Not Available | Not Available | RHEA |
| MMDBm0028980 | Aspergillus oryzae RIB40 | Fungi | Ascomycota | Not Available | Not Available | RHEA |
| MMDBm0036453 | Trichophyton verrucosum HKI 0517 | Fungi | Ascomycota | Not Available | Not Available | RHEA |
| MMDBm0163594 | Mucor lusitanicus | Fungi | Mucoromycota | Not Available | Not Available | RHEA |
| MMDBm0081377 | Podospora anserina S mat+ | Fungi | Ascomycota | Not Available | Not Available | RHEA |
| MMDBm0163406 | Blakeslea trispora | Fungi | Mucoromycota | Not Available | Not Available | RHEA |
| MMDBm0156399 | Ustilago maydis 521 | Fungi | Basidiomycota | Not Available | Not Available | RHEA |
| MMDBm0082117 | Neurospora crassa OR74A | Fungi | Ascomycota | Not Available | Not Available | RHEA |
| MMDBm0019059 | Pyrenophora tritici-repentis Pt-1C-BFP | Fungi | Ascomycota | Not Available | Not Available | RHEA |
| MMDBm0055039 | Colletotrichum graminicola M1.001 | Fungi | Ascomycota | Not Available | Not Available | RHEA |
| MMDBm0001671 | Halobacterium sp. NRC-1 | Archaea | Euryarchaeota | Not Available | Not Available | RHEA |
| MMDBm0001672 | Halobacterium salinarum R1 | Archaea | Euryarchaeota | Not Available | Not Available | RHEA |
| MMDBm0001166 | Achromobacter xylosoxidans A8 | Bacteria | Proteobacteria | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0002663 | Synechococcus elongatus PCC 7942 | Bacteria | Cyanobacteria | Not Available | Not Available | RHEA |
| MMDBm0580585 | Pseudomonas monteilii NBRC 103158 = DSM 14164 | Bacteria | Proteobacteria | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0481922 | Alcaligenes faecalis subsp. faecalis NCIB 8687 | Bacteria | Proteobacteria | Human Feces | Metabolic reconstruction | VMH |
