MiMeDB: Showing metabocard for Sphingofungin D (MMDBc0002934)

Record Information

Version

1.0

Status

Detected and Quantified

Creation Date

2021-05-14 21:07:23 UTC

Update Date

2022-08-31 06:19:59 UTC

Metabolite ID

MMDBc0002934

Metabolite Identification

Common Name

Sphingofungin D

Description

NCGC00381188-01!(E,2S,3R,4R,5S)-2-acetamido-3,4,5,14-tetrahydroxyicos-6-enoic acid belongs to the class of organic compounds known as phytoceramides. These are n-acylated 4-hydroxysphinganine. NCGC00381188-01!(E,2S,3R,4R,5S)-2-acetamido-3,4,5,14-tetrahydroxyicos-6-enoic acid is an extremely weak basic (essentially neutral) compound (based on its pKa).

Structure

MOL SDF PDB SMILES InChI


  Mrv1652305142123072D          

 37 36  0  0  1  0            999 V2000
   -3.9039    1.4289    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.0999    1.8414    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1895    1.8414    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4750    1.4289    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7605    1.8414    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2408    1.4289    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9552    1.8414    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5263    1.8414    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.6697    1.4289    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0461    1.4289    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8118    1.4289    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.3842    1.8414    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3316    1.8414    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0974    1.8414    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.0987    1.4289    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.3855    1.4289    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3829    1.4289    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.8131    1.8414    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    8.9565    1.4289    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    7.5276    1.4289    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    8.2421    1.8414    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    8.9565    0.6039    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.6710    1.8414    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   10.3855    0.6039    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.3829    0.6039    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.8131    2.6664    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.5276    0.6039    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    8.2421    2.6664    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    9.6710    0.1914    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    8.2421    0.1914    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.3842    2.6664    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.0987    0.6039    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.3829    2.2539    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.8131    1.0164    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.2421    1.0164    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.5276    2.2539    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.9565    2.2539    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
  3  1  1  0  0  0  0
  4  3  1  0  0  0  0
  5  4  1  0  0  0  0
  7  6  1  0  0  0  0
  8  6  1  0  0  0  0
  9  7  1  0  0  0  0
 10  5  1  0  0  0  0
 11  8  1  0  0  0  0
 12  9  1  0  0  0  0
 13 10  1  0  0  0  0
 14 11  1  0  0  0  0
 15 12  2  0  0  0  0
 16  2  1  4  0  0  0
 17 13  1  0  0  0  0
 17 14  1  0  0  0  0
 18 15  1  0  0  0  0
 20 18  1  0  0  0  0
 21 19  1  0  0  0  0
 21 20  1  0  0  0  0
 22 19  1  0  0  0  0
 23 16  2  0  0  0  0
 19 23  1  1  0  0  0
 24 16  1  0  0  0  0
 25 17  1  0  0  0  0
 18 26  1  1  0  0  0
 20 27  1  1  0  0  0
 21 28  1  6  0  0  0
 29 22  2  0  0  0  0
 30 22  1  0  0  0  0
 31 12  1  0  0  0  0
 32 15  1  0  0  0  0
 33 17  1  0  0  0  0
 18 34  1  1  0  0  0
 19 35  1  1  0  0  0
 20 36  1  1  0  0  0
 21 37  1  1  0  0  0
M  END


  Mrv1652305142123072D          

 37 36  0  0  1  0            999 V2000
   -3.9039    1.4289    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.0999    1.8414    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1895    1.8414    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4750    1.4289    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7605    1.8414    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2408    1.4289    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9552    1.8414    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5263    1.8414    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.6697    1.4289    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0461    1.4289    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8118    1.4289    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.3842    1.8414    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3316    1.8414    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0974    1.8414    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.0987    1.4289    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.3855    1.4289    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3829    1.4289    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.8131    1.8414    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    8.9565    1.4289    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    7.5276    1.4289    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    8.2421    1.8414    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    8.9565    0.6039    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.6710    1.8414    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   10.3855    0.6039    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.3829    0.6039    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.8131    2.6664    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.5276    0.6039    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    8.2421    2.6664    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    9.6710    0.1914    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    8.2421    0.1914    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.3842    2.6664    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.0987    0.6039    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.3829    2.2539    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.8131    1.0164    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.2421    1.0164    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.5276    2.2539    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.9565    2.2539    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
  3  1  1  0  0  0  0
  4  3  1  0  0  0  0
  5  4  1  0  0  0  0
  7  6  1  0  0  0  0
  8  6  1  0  0  0  0
  9  7  1  0  0  0  0
 10  5  1  0  0  0  0
 11  8  1  0  0  0  0
 12  9  1  0  0  0  0
 13 10  1  0  0  0  0
 14 11  1  0  0  0  0
 15 12  2  0  0  0  0
 16  2  1  4  0  0  0
 17 13  1  0  0  0  0
 17 14  1  0  0  0  0
 18 15  1  0  0  0  0
 20 18  1  0  0  0  0
 21 19  1  0  0  0  0
 21 20  1  0  0  0  0
 22 19  1  0  0  0  0
 23 16  2  0  0  0  0
 19 23  1  1  0  0  0
 24 16  1  0  0  0  0
 25 17  1  0  0  0  0
 18 26  1  1  0  0  0
 20 27  1  1  0  0  0
 21 28  1  6  0  0  0
 29 22  2  0  0  0  0
 30 22  1  0  0  0  0
 31 12  1  0  0  0  0
 32 15  1  0  0  0  0
 33 17  1  0  0  0  0
 18 34  1  1  0  0  0
 19 35  1  1  0  0  0
 20 36  1  1  0  0  0
 21 37  1  1  0  0  0
M  END
> <DATABASE_ID>
MMDBc0002934

> <DATABASE_NAME>
MIME

> <SMILES>
[H]\C(CCCCCCC([H])(O)CCCCCC)=C(\[H])[C@]([H])(O)[C@@]([H])(O)[C@]([H])(O)[C@]([H])(N=C(C)O)C(O)=O

> <INCHI_IDENTIFIER>
InChI=1S/C22H41NO7/c1-3-4-5-10-13-17(25)14-11-8-6-7-9-12-15-18(26)20(27)21(28)19(22(29)30)23-16(2)24/h12,15,17-21,25-28H,3-11,13-14H2,1-2H3,(H,23,24)(H,29,30)/b15-12+/t17?,18-,19-,20+,21+/m0/s1

> <INCHI_KEY>
VKFZVQCKAPPEFZ-LNBSYBDWSA-N

> <FORMULA>
C22H41NO7

> <MOLECULAR_WEIGHT>
431.57

> <EXACT_MASS>
431.288302664

> <JCHEM_ACCEPTOR_COUNT>
8

> <JCHEM_ATOM_COUNT>
71

> <JCHEM_AVERAGE_POLARIZABILITY>
49.710226939368326

> <JCHEM_BIOAVAILABILITY>
0

> <JCHEM_DONOR_COUNT>
6

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
(2S,3R,4R,5S,6E)-3,4,5,14-tetrahydroxy-2-[(1-hydroxyethylidene)amino]icos-6-enoic acid

> <ALOGPS_LOGP>
3.71

> <JCHEM_LOGP>
2.877916905666666

> <ALOGPS_LOGS>
-3.67

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
0

> <JCHEM_PHYSIOLOGICAL_CHARGE>
-1

> <JCHEM_PKA>
5.863380348626612

> <JCHEM_PKA_STRONGEST_ACIDIC>
3.7556114931197326

> <JCHEM_PKA_STRONGEST_BASIC>
0.4010464159788782

> <JCHEM_POLAR_SURFACE_AREA>
150.81

> <JCHEM_REFRACTIVITY>
115.31939999999996

> <JCHEM_ROTATABLE_BOND_COUNT>
18

> <JCHEM_RULE_OF_FIVE>
0

> <ALOGPS_SOLUBILITY>
9.14e-02 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(2S,3R,4R,5S,6E)-3,4,5,14-tetrahydroxy-2-[(1-hydroxyethylidene)amino]icos-6-enoic acid

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 14-MAY-21   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   14-MAY-21         0                                  
HETATM    1  C   UNK     0      -7.287   2.667   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0      20.720   3.437   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0      -5.954   3.437   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0      -4.620   2.667   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0      -3.286   3.437   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       6.049   2.667   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       7.383   3.437   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0       4.716   3.437   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0       8.717   2.667   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0      -1.953   2.667   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       3.382   2.667   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0      10.050   3.437   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0      -0.619   3.437   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0       2.048   3.437   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0      11.384   2.667   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0      19.386   2.667   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0       0.715   2.667   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0      12.718   3.437   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0      16.719   2.667   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0      14.052   2.667   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0      15.385   3.437   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0      16.719   1.127   0.000  0.00  0.00           C+0
HETATM   23  N   UNK     0      18.053   3.437   0.000  0.00  0.00           N+0
HETATM   24  O   UNK     0      19.386   1.127   0.000  0.00  0.00           O+0
HETATM   25  O   UNK     0       0.715   1.127   0.000  0.00  0.00           O+0
HETATM   26  O   UNK     0      12.718   4.977   0.000  0.00  0.00           O+0
HETATM   27  O   UNK     0      14.052   1.127   0.000  0.00  0.00           O+0
HETATM   28  O   UNK     0      15.385   4.977   0.000  0.00  0.00           O+0
HETATM   29  O   UNK     0      18.053   0.357   0.000  0.00  0.00           O+0
HETATM   30  O   UNK     0      15.385   0.357   0.000  0.00  0.00           O+0
HETATM   31  H   UNK     0      10.050   4.977   0.000  0.00  0.00           H+0
HETATM   32  H   UNK     0      11.384   1.127   0.000  0.00  0.00           H+0
HETATM   33  H   UNK     0       0.715   4.207   0.000  0.00  0.00           H+0
HETATM   34  H   UNK     0      12.718   1.897   0.000  0.00  0.00           H+0
HETATM   35  H   UNK     0      15.385   1.897   0.000  0.00  0.00           H+0
HETATM   36  H   UNK     0      14.052   4.207   0.000  0.00  0.00           H+0
HETATM   37  H   UNK     0      16.719   4.207   0.000  0.00  0.00           H+0
CONECT    1    3                                                            
CONECT    2   16                                                            
CONECT    3    1    4                                                       
CONECT    4    3    5                                                       
CONECT    5    4   10                                                       
CONECT    6    7    8                                                       
CONECT    7    6    9                                                       
CONECT    8    6   11                                                       
CONECT    9    7   12                                                       
CONECT   10    5   13                                                       
CONECT   11    8   14                                                       
CONECT   12    9   15   31                                                  
CONECT   13   10   17                                                       
CONECT   14   11   17                                                       
CONECT   15   12   18   32                                                  
CONECT   16    2   23   24                                                  
CONECT   17   13   14   25   33                                             
CONECT   18   15   20   26   34                                             
CONECT   19   21   22   23   35                                             
CONECT   20   18   21   27   36                                             
CONECT   21   19   20   28   37                                             
CONECT   22   19   29   30                                                  
CONECT   23   16   19                                                       
CONECT   24   16                                                            
CONECT   25   17                                                            
CONECT   26   18                                                            
CONECT   27   20                                                            
CONECT   28   21                                                            
CONECT   29   22                                                            
CONECT   30   22                                                            
CONECT   31   12                                                            
CONECT   32   15                                                            
CONECT   33   17                                                            
CONECT   34   18                                                            
CONECT   35   19                                                            
CONECT   36   20                                                            
CONECT   37   21                                                            
MASTER        0    0    0    0    0    0    0    0   37    0   72    0
END

Synonyms

Value	Source
NCGC00381188-01!(e,2S,3R,4R,5S)-2-acetamido-3,4,5,14-tetrahydroxyicos-6-enoate	Generator

Molecular Formula

C₂₂H₄₁NO₇

Average Mass

431.57

Monoisotopic Mass

431.288302664

IUPAC Name

(2S,3R,4R,5S,6E)-3,4,5,14-tetrahydroxy-2-[(1-hydroxyethylidene)amino]icos-6-enoic acid

Traditional Name

(2S,3R,4R,5S,6E)-3,4,5,14-tetrahydroxy-2-[(1-hydroxyethylidene)amino]icos-6-enoic acid

CAS Registry Number

Not Available

SMILES

[H]\C(CCCCCCC([H])(O)CCCCCC)=C(\[H])[C@]([H])(O)[C@@]([H])(O)[C@]([H])(O)[C@]([H])(N=C(C)O)C(O)=O

InChI Identifier

InChI=1S/C22H41NO7/c1-3-4-5-10-13-17(25)14-11-8-6-7-9-12-15-18(26)20(27)21(28)19(22(29)30)23-16(2)24/h12,15,17-21,25-28H,3-11,13-14H2,1-2H3,(H,23,24)(H,29,30)/b15-12+/t17?,18-,19-,20+,21+/m0/s1

InChI Key

VKFZVQCKAPPEFZ-LNBSYBDWSA-N

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as phytoceramides. These are n-acylated 4-hydroxysphinganine.

Kingdom

Organic compounds

Super Class

Lipids and lipid-like molecules

Class

Sphingolipids

Sub Class

Ceramides

Direct Parent

Phytoceramides

Alternative Parents

Substituents

N-acyl-4-hydroxysphinganine
Long-chain fatty acid
N-acyl-l-alpha-amino acid
N-acyl-alpha-amino acid
N-acyl-alpha amino acid or derivatives
Alpha-amino acid or derivatives
Amino fatty acid
Beta-hydroxy acid
Hydroxy fatty acid
Hydroxy acid
Fatty acyl
Fatty acid
Unsaturated fatty acid
Acetamide
Secondary carboxylic acid amide
Secondary alcohol
Carboxamide group
1,2-diol
Polyol
Carboxylic acid derivative
Carboxylic acid
Monocarboxylic acid or derivatives
Organonitrogen compound
Carbonyl group
Organic oxide
Organic oxygen compound
Organooxygen compound
Alcohol
Hydrocarbon derivative
Organic nitrogen compound
Aliphatic acyclic compound

Molecular Framework

Aliphatic acyclic compounds

External Descriptors

Not Available

Functional Ontology

Not Available

Physical Properties

State

Expected Solid

Predicted Properties

Property	Value	Source
Water Solubility	0.091 g/L	ALOGPS
logP	3.71	ALOGPS
logP	2.88	ChemAxon
logS	-3.7	ALOGPS
pKa (Strongest Acidic)	3.76	ChemAxon
pKa (Strongest Basic)	0.4	ChemAxon
Physiological Charge	-1	ChemAxon
Hydrogen Acceptor Count	8	ChemAxon
Hydrogen Donor Count	6	ChemAxon
Polar Surface Area	150.81 Å²	ChemAxon
Rotatable Bond Count	18	ChemAxon
Refractivity	115.32 m³·mol⁻¹	ChemAxon
Polarizability	49.71 Å³	ChemAxon
Number of Rings	0	ChemAxon
Bioavailability	No	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

Spectra

Spectrum Type	Description	Splash Key	Deposition Date	View
Predicted GC-MS	Predicted GC-MS Spectrum - GC-MS (TMS_3_6) - 70eV, Positive	Not Available	2022-08-08	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 10V, Positive	Not Available	2022-08-10	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 20V, Positive	Not Available	2022-08-10	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 40V, Positive	Not Available	2022-08-10	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 10V, Negative	Not Available	2022-08-10	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 20V, Negative	Not Available	2022-08-10	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 40V, Negative	Not Available	2022-08-10	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 100 MHz, H₂O, predicted)		2022-08-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)		2022-08-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 1000 MHz, H₂O, predicted)		2022-08-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)		2022-08-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 200 MHz, H₂O, predicted)		2022-08-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)		2022-08-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 300 MHz, H₂O, predicted)		2022-08-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)		2022-08-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 400 MHz, H₂O, predicted)		2022-08-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)		2022-08-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 500 MHz, H₂O, predicted)		2022-08-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)		2022-08-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 600 MHz, H₂O, predicted)		2022-08-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)		2022-08-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 700 MHz, H₂O, predicted)		2022-08-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)		2022-08-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 800 MHz, H₂O, predicted)		2022-08-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)		2022-08-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 900 MHz, H₂O, predicted)		2022-08-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)		2022-08-20	View Spectrum

Biological Properties

Cellular Locations

Not Available

Biospecimen Locations

Not Available

Tissue Locations

Not Available

Associated OMIM IDs

114500 (Colorectal cancer)
610247 (Eosinophilic esophagitis)

Human Proteins and Enzymes

Protein ID	Protein Name	Protein Type	Uniprot ID	Species

Human Pathways

Pathways

Name	SMPDB/PathBank

Metabolic Reactions

Not Available

Health Effects and Bioactivity

Health Outcome/Bioactivity	Metabolite Response/Effect	Evidence Type	Host and Biospecimen	Data Source	Reference

Microbial Sources

Superkingdom/Kingdom	Phylum	Total species	Hosts and Body Sites	Microbial Links
Eukaryota/Fungi	Ascomycota	1	Human feces	Metabolic reconstruction

Exposure Sources

Source Type	Source Sub-type	Species	Data Source	Reference

Host Biospecimen and Location

Host and Biospecimen	Status	Mean	Std	Min	Max	Units	Age	Sex	Health Condition	Data Source	Reference

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FooDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

8246956

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

10071416

PDB ID

Not Available

ChEBI ID

Not Available

Food Biomarker Ontology

Not Available

References

Synthesis Reference

Not Available

General References

van Santen JA, Poynton EF, Iskakova D, McMann E, Alsup TA, Clark TN, Fergusson CH, Fewer DP, Hughes AH, McCadden CA, Parra J, Soldatou S, Rudolf JD, Janssen EM, Duncan KR, Linington RG: The Natural Products Atlas 2.0: a database of microbially-derived natural products. Nucleic Acids Res. 2022 Jan 7;50(D1):D1317-D1323. doi: 10.1093/nar/gkab941. [PubMed:34718710 ]

Showing metabocard for Sphingofungin D (MMDBc0002934)

MOL for #<Metabolite:0x00007fed14421b80>

3D MOL for #<Metabolite:0x00007fed14421b80>

3D SDF for #<Metabolite:0x00007fed14421b80>

3D-SDF for #<Metabolite:0x00007fed14421b80>

PDB for #<Metabolite:0x00007fed14421b80>

3D PDB for #<Metabolite:0x00007fed14421b80>

SMILES for #<Metabolite:0x00007fed14421b80>

INCHI for #<Metabolite:0x00007fed14421b80>

Structure for #<Metabolite:0x00007fed14421b80>

3D Structure for #<Metabolite:0x00007fed14421b80>