MiMeDB: Showing metabocard for Victorin B (MMDBc0014826)

Record Information

Version

1.0

Status

Detected and Quantified

Creation Date

2021-05-15 05:46:40 UTC

Update Date

2022-08-31 06:38:18 UTC

Metabolite ID

MMDBc0014826

Metabolite Identification

Common Name

Victorin B

Description

Based on a literature review very few articles have been published on (2S,6Z)-3-{[(2S,3R)-6-amino-2-{[(2S)-5-chloro-1-hydroxy-4-methyl-2-[(1,2,2-trihydroxyethylidene)amino]pentylidene]amino}-1,3-dihydroxyhexylidene]amino}-6-(chloromethylidene)-4,7,12-trihydroxy-11-oxo-2-(propan-2-yl)-2H,3H,6H,9H,10H,11H,12H,13H-cyclopenta[k]1-oxa-5,8-diazacyclododecane-9-carboxylic acid.

Structure

MOL SDF PDB SMILES InChI


  Mrv1652305152107462D          

 61 62  0  0  1  0            999 V2000
    2.8579    0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9079    0.4838    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434   -2.8875    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.1447   -0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.4302   -0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.8592   -0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579    3.3000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3588    1.8076    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5724    2.8875    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5724    1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434   -2.0625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434    2.8875    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5724   -2.0625    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.8579    4.1250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2868    3.3000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.7158   -0.8250    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.8739    2.4750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434    2.0625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0013   -0.4125    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    4.2868    1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3588    3.1424    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5724    2.0625    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    4.2868   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2868    4.1250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0013    0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0013    2.0625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2868   -3.3000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434    4.5375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2868   -4.1250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145   -2.0625    0.0000 Cl  0  0  0  0  0  0  0  0  0  0  0  0
    2.7519    2.8013    0.0000 Cl  0  0  0  0  0  0  0  0  0  0  0  0
    8.5737   -0.8250    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    3.5724   -2.8875    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    3.5724    4.5375    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    5.0013    2.8875    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    4.2868   -0.8250    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    4.2868    0.8250    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    5.7158   -1.6500    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.0489    2.4750    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.1039    3.9271    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.0013   -2.0625    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.0013    4.5375    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.7158    0.8250    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.7158    1.6500    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.0013   -2.8875    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289    4.1250    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434    5.3625    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.0013   -4.5375    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.5724   -4.5375    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579    1.6500    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.5724    3.7125    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579   -2.4750    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.5724   -1.2375    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579    4.9500    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.7158    0.0000    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4993    3.2101    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.0013   -1.2375    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.2868    2.4750    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579    2.4750    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
  5  4  1  0  0  0  0
  6  4  1  0  0  0  0
 12  1  1  0  0  0  0
 12  2  1  0  0  0  0
 13  3  1  0  0  0  0
 13  7  1  0  0  0  0
 13 10  1  0  0  0  0
 14  8  1  0  0  0  0
 15  7  1  0  0  0  0
 16  8  1  0  0  0  0
 17 11  2  0  0  0  0
 18  5  1  0  0  0  0
 19  9  1  0  0  0  0
 20  9  1  0  0  0  0
 20 14  2  0  0  0  0
 21 18  1  0  0  0  0
 23 14  1  0  0  0  0
 23 19  1  0  0  0  0
 24 12  1  1  0  0  0
 24 22  1  0  0  0  0
 25 15  1  0  0  0  0
 26 17  1  0  0  0  0
 27 21  1  0  0  0  0
 28 22  1  0  0  0  0
 30 16  1  0  0  0  0
 31 29  1  0  0  0  0
 32 10  1  0  0  0  0
 33 11  1  0  0  0  0
 34  6  1  0  0  0  0
 15 35  1  6  0  0  0
 35 29  2  0  0  0  0
 36 16  1  4  0  0  0
 36 26  2  0  0  0  0
 37 17  1  4  0  0  0
 37 28  2  0  0  0  0
 21 38  1  6  0  0  0
 38 25  2  0  0  0  0
 39 22  1  4  0  0  0
 39 27  2  0  0  0  0
 18 40  1  6  0  0  0
 41 19  1  0  0  0  0
 42 23  2  0  0  0  0
 25 43  1  4  0  0  0
 44 26  1  0  0  0  0
 45 27  1  0  0  0  0
 46 28  1  0  0  0  0
 29 47  1  4  0  0  0
 48 30  2  0  0  0  0
 49 30  1  0  0  0  0
 50 31  1  0  0  0  0
 51 31  1  0  0  0  0
 52 20  1  0  0  0  0
 52 24  1  0  0  0  0
 53 11  1  0  0  0  0
 54 13  1  0  0  0  0
 15 55  1  6  0  0  0
 56 16  1  0  0  0  0
 18 57  1  6  0  0  0
 58 19  1  0  0  0  0
 21 59  1  1  0  0  0
 60 22  1  0  0  0  0
 24 61  1  1  0  0  0
M  END


  Mrv1652305152107462D          

 61 62  0  0  1  0            999 V2000
    2.8579    0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9079    0.4838    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434   -2.8875    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.1447   -0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.4302   -0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.8592   -0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579    3.3000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3588    1.8076    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5724    2.8875    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5724    1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434   -2.0625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434    2.8875    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5724   -2.0625    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.8579    4.1250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2868    3.3000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.7158   -0.8250    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.8739    2.4750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434    2.0625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0013   -0.4125    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    4.2868    1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3588    3.1424    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5724    2.0625    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    4.2868   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2868    4.1250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0013    0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0013    2.0625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2868   -3.3000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434    4.5375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2868   -4.1250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145   -2.0625    0.0000 Cl  0  0  0  0  0  0  0  0  0  0  0  0
    2.7519    2.8013    0.0000 Cl  0  0  0  0  0  0  0  0  0  0  0  0
    8.5737   -0.8250    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    3.5724   -2.8875    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    3.5724    4.5375    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    5.0013    2.8875    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    4.2868   -0.8250    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    4.2868    0.8250    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    5.7158   -1.6500    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.0489    2.4750    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.1039    3.9271    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.0013   -2.0625    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.0013    4.5375    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.7158    0.8250    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.7158    1.6500    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.0013   -2.8875    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289    4.1250    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434    5.3625    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.0013   -4.5375    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.5724   -4.5375    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579    1.6500    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.5724    3.7125    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579   -2.4750    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.5724   -1.2375    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579    4.9500    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.7158    0.0000    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4993    3.2101    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.0013   -1.2375    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.2868    2.4750    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579    2.4750    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
  5  4  1  0  0  0  0
  6  4  1  0  0  0  0
 12  1  1  0  0  0  0
 12  2  1  0  0  0  0
 13  3  1  0  0  0  0
 13  7  1  0  0  0  0
 13 10  1  0  0  0  0
 14  8  1  0  0  0  0
 15  7  1  0  0  0  0
 16  8  1  0  0  0  0
 17 11  2  0  0  0  0
 18  5  1  0  0  0  0
 19  9  1  0  0  0  0
 20  9  1  0  0  0  0
 20 14  2  0  0  0  0
 21 18  1  0  0  0  0
 23 14  1  0  0  0  0
 23 19  1  0  0  0  0
 24 12  1  1  0  0  0
 24 22  1  0  0  0  0
 25 15  1  0  0  0  0
 26 17  1  0  0  0  0
 27 21  1  0  0  0  0
 28 22  1  0  0  0  0
 30 16  1  0  0  0  0
 31 29  1  0  0  0  0
 32 10  1  0  0  0  0
 33 11  1  0  0  0  0
 34  6  1  0  0  0  0
 15 35  1  6  0  0  0
 35 29  2  0  0  0  0
 36 16  1  4  0  0  0
 36 26  2  0  0  0  0
 37 17  1  4  0  0  0
 37 28  2  0  0  0  0
 21 38  1  6  0  0  0
 38 25  2  0  0  0  0
 39 22  1  4  0  0  0
 39 27  2  0  0  0  0
 18 40  1  6  0  0  0
 41 19  1  0  0  0  0
 42 23  2  0  0  0  0
 25 43  1  4  0  0  0
 44 26  1  0  0  0  0
 45 27  1  0  0  0  0
 46 28  1  0  0  0  0
 29 47  1  4  0  0  0
 48 30  2  0  0  0  0
 49 30  1  0  0  0  0
 50 31  1  0  0  0  0
 51 31  1  0  0  0  0
 52 20  1  0  0  0  0
 52 24  1  0  0  0  0
 53 11  1  0  0  0  0
 54 13  1  0  0  0  0
 15 55  1  6  0  0  0
 56 16  1  0  0  0  0
 18 57  1  6  0  0  0
 58 19  1  0  0  0  0
 21 59  1  1  0  0  0
 60 22  1  0  0  0  0
 24 61  1  1  0  0  0
M  END
> <DATABASE_ID>
MMDBc0014826

> <DATABASE_NAME>
MIME

> <SMILES>
[H]C(Cl)=C1N=C(O)C([H])(N=C(O)[C@@]([H])(N=C(O)[C@]([H])(CC([H])(C)CCl)N=C(O)C(O)O)[C@]([H])(O)CCCN)[C@@]([H])(OC2=C(CC([H])(N=C1O)C(O)=O)C(=O)C([H])(O)C2)C(C)C

> <INCHI_IDENTIFIER>
InChI=1S/C31H46Cl2N6O13/c1-12(2)24-22(28(46)37-17(11-33)26(44)36-16(30(48)49)8-14-20(52-24)9-19(41)23(14)42)39-27(45)21(18(40)5-4-6-34)38-25(43)15(7-13(3)10-32)35-29(47)31(50)51/h11-13,15-16,18-19,21-22,24,31,40-41,50-51H,4-10,34H2,1-3H3,(H,35,47)(H,36,44)(H,37,46)(H,38,43)(H,39,45)(H,48,49)/b17-11-/t13?,15-,16?,18+,19?,21-,22?,24-/m0/s1

> <INCHI_KEY>
QONZIYSJSHZYDF-AAYVCULRSA-N

> <FORMULA>
C31H46Cl2N6O13

> <MOLECULAR_WEIGHT>
781.64

> <EXACT_MASS>
780.249991

> <JCHEM_ACCEPTOR_COUNT>
19

> <JCHEM_ATOM_COUNT>
98

> <JCHEM_AVERAGE_POLARIZABILITY>
75.90880725338565

> <JCHEM_BIOAVAILABILITY>
0

> <JCHEM_DONOR_COUNT>
11

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
(2S,6E)-3-{[(2S,3R)-6-amino-2-{[(2S)-5-chloro-1-hydroxy-4-methyl-2-[(1,2,2-trihydroxyethylidene)amino]pentylidene]amino}-1,3-dihydroxyhexylidene]amino}-6-(chloromethylidene)-4,7,12-trihydroxy-11-oxo-2-(propan-2-yl)-2H,3H,6H,9H,10H,11H,12H,13H-cyclopenta[k]1-oxa-5,8-diazacyclododecane-9-carboxylic acid

> <ALOGPS_LOGP>
-1.26

> <JCHEM_LOGP>
-2.338181421019881

> <ALOGPS_LOGS>
-3.99

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
2

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
2.599800721647665

> <JCHEM_PKA_STRONGEST_ACIDIC>
1.6490779905940665

> <JCHEM_PKA_STRONGEST_BASIC>
9.899404231858604

> <JCHEM_POLAR_SURFACE_AREA>
333.49

> <JCHEM_REFRACTIVITY>
184.66990000000004

> <JCHEM_ROTATABLE_BOND_COUNT>
15

> <JCHEM_RULE_OF_FIVE>
0

> <ALOGPS_SOLUBILITY>
7.94e-02 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(2S,6E)-3-{[(2S,3R)-6-amino-2-{[(2S)-5-chloro-1-hydroxy-4-methyl-2-[(1,2,2-trihydroxyethylidene)amino]pentylidene]amino}-1,3-dihydroxyhexylidene]amino}-6-(chloromethylidene)-4,7,12-trihydroxy-2-isopropyl-11-oxo-2H,3H,9H,10H,12H,13H-cyclopenta[k]1-oxa-5,8-diazacyclododecane-9-carboxylic acid

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 15-MAY-21   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   15-MAY-21         0                                  
HETATM    1  C   UNK     0       5.335   1.540   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       7.295   0.903   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0       4.001  -5.390   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0      13.337  -1.540   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0      12.003  -0.770   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0      14.670  -0.770   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       5.335  -3.080   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0       5.335   6.160   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0       2.536   3.374   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       2.667  -3.080   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       6.668   5.390   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       6.668   2.310   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       4.001  -3.850   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0       4.001   5.390   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0       6.668  -3.850   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0       5.335   7.700   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0       8.002   6.160   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0      10.669  -1.540   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0       1.631   4.620   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0       4.001   3.850   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0       9.336  -0.770   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0       8.002   3.080   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0       2.536   5.866   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0       6.668   3.850   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0       8.002  -3.080   0.000  0.00  0.00           C+0
HETATM   26  C   UNK     0       8.002   7.700   0.000  0.00  0.00           C+0
HETATM   27  C   UNK     0       9.336   0.770   0.000  0.00  0.00           C+0
HETATM   28  C   UNK     0       9.336   3.850   0.000  0.00  0.00           C+0
HETATM   29  C   UNK     0       8.002  -6.160   0.000  0.00  0.00           C+0
HETATM   30  C   UNK     0       4.001   8.470   0.000  0.00  0.00           C+0
HETATM   31  C   UNK     0       8.002  -7.700   0.000  0.00  0.00           C+0
HETATM   32 Cl   UNK     0       1.334  -3.850   0.000  0.00  0.00          Cl+0
HETATM   33 Cl   UNK     0       5.137   5.229   0.000  0.00  0.00          Cl+0
HETATM   34  N   UNK     0      16.004  -1.540   0.000  0.00  0.00           N+0
HETATM   35  N   UNK     0       6.668  -5.390   0.000  0.00  0.00           N+0
HETATM   36  N   UNK     0       6.668   8.470   0.000  0.00  0.00           N+0
HETATM   37  N   UNK     0       9.336   5.390   0.000  0.00  0.00           N+0
HETATM   38  N   UNK     0       8.002  -1.540   0.000  0.00  0.00           N+0
HETATM   39  N   UNK     0       8.002   1.540   0.000  0.00  0.00           N+0
HETATM   40  O   UNK     0      10.669  -3.080   0.000  0.00  0.00           O+0
HETATM   41  O   UNK     0       0.091   4.620   0.000  0.00  0.00           O+0
HETATM   42  O   UNK     0       2.061   7.331   0.000  0.00  0.00           O+0
HETATM   43  O   UNK     0       9.336  -3.850   0.000  0.00  0.00           O+0
HETATM   44  O   UNK     0       9.336   8.470   0.000  0.00  0.00           O+0
HETATM   45  O   UNK     0      10.669   1.540   0.000  0.00  0.00           O+0
HETATM   46  O   UNK     0      10.669   3.080   0.000  0.00  0.00           O+0
HETATM   47  O   UNK     0       9.336  -5.390   0.000  0.00  0.00           O+0
HETATM   48  O   UNK     0       2.667   7.700   0.000  0.00  0.00           O+0
HETATM   49  O   UNK     0       4.001  10.010   0.000  0.00  0.00           O+0
HETATM   50  O   UNK     0       9.336  -8.470   0.000  0.00  0.00           O+0
HETATM   51  O   UNK     0       6.668  -8.470   0.000  0.00  0.00           O+0
HETATM   52  O   UNK     0       5.335   3.080   0.000  0.00  0.00           O+0
HETATM   53  H   UNK     0       6.668   6.930   0.000  0.00  0.00           H+0
HETATM   54  H   UNK     0       5.335  -4.620   0.000  0.00  0.00           H+0
HETATM   55  H   UNK     0       6.668  -2.310   0.000  0.00  0.00           H+0
HETATM   56  H   UNK     0       5.335   9.240   0.000  0.00  0.00           H+0
HETATM   57  H   UNK     0      10.669   0.000   0.000  0.00  0.00           H+0
HETATM   58  H   UNK     0       0.932   5.992   0.000  0.00  0.00           H+0
HETATM   59  H   UNK     0       9.336  -2.310   0.000  0.00  0.00           H+0
HETATM   60  H   UNK     0       8.002   4.620   0.000  0.00  0.00           H+0
HETATM   61  H   UNK     0       5.335   4.620   0.000  0.00  0.00           H+0
CONECT    1   12                                                            
CONECT    2   12                                                            
CONECT    3   13                                                            
CONECT    4    5    6                                                       
CONECT    5    4   18                                                       
CONECT    6    4   34                                                       
CONECT    7   13   15                                                       
CONECT    8   14   16                                                       
CONECT    9   19   20                                                       
CONECT   10   13   32                                                       
CONECT   11   17   33   53                                                  
CONECT   12    1    2   24                                                  
CONECT   13    3    7   10   54                                             
CONECT   14    8   20   23                                                  
CONECT   15    7   25   35   55                                             
CONECT   16    8   30   36   56                                             
CONECT   17   11   26   37                                                  
CONECT   18    5   21   40   57                                             
CONECT   19    9   23   41   58                                             
CONECT   20    9   14   52                                                  
CONECT   21   18   27   38   59                                             
CONECT   22   24   28   39   60                                             
CONECT   23   14   19   42                                                  
CONECT   24   12   22   52   61                                             
CONECT   25   15   38   43                                                  
CONECT   26   17   36   44                                                  
CONECT   27   21   39   45                                                  
CONECT   28   22   37   46                                                  
CONECT   29   31   35   47                                                  
CONECT   30   16   48   49                                                  
CONECT   31   29   50   51                                                  
CONECT   32   10                                                            
CONECT   33   11                                                            
CONECT   34    6                                                            
CONECT   35   15   29                                                       
CONECT   36   16   26                                                       
CONECT   37   17   28                                                       
CONECT   38   21   25                                                       
CONECT   39   22   27                                                       
CONECT   40   18                                                            
CONECT   41   19                                                            
CONECT   42   23                                                            
CONECT   43   25                                                            
CONECT   44   26                                                            
CONECT   45   27                                                            
CONECT   46   28                                                            
CONECT   47   29                                                            
CONECT   48   30                                                            
CONECT   49   30                                                            
CONECT   50   31                                                            
CONECT   51   31                                                            
CONECT   52   20   24                                                       
CONECT   53   11                                                            
CONECT   54   13                                                            
CONECT   55   15                                                            
CONECT   56   16                                                            
CONECT   57   18                                                            
CONECT   58   19                                                            
CONECT   59   21                                                            
CONECT   60   22                                                            
CONECT   61   24                                                            
MASTER        0    0    0    0    0    0    0    0   61    0  124    0
END

Synonyms

Value	Source
(2S,6Z)-3-{[(2S,3R)-6-amino-2-{[(2S)-5-chloro-1-hydroxy-4-methyl-2-[(1,2,2-trihydroxyethylidene)amino]pentylidene]amino}-1,3-dihydroxyhexylidene]amino}-6-(chloromethylidene)-4,7,12-trihydroxy-11-oxo-2-(propan-2-yl)-2H,3H,6H,9H,10H,11H,12H,13H-cyclopenta[K]1-oxa-5,8-diazacyclododecane-9-carboxylate	Generator

Molecular Formula

C₃₁H₄₆Cl₂N₆O₁₃

Average Mass

781.64

Monoisotopic Mass

780.249991

IUPAC Name

(2S,6E)-3-{[(2S,3R)-6-amino-2-{[(2S)-5-chloro-1-hydroxy-4-methyl-2-[(1,2,2-trihydroxyethylidene)amino]pentylidene]amino}-1,3-dihydroxyhexylidene]amino}-6-(chloromethylidene)-4,7,12-trihydroxy-11-oxo-2-(propan-2-yl)-2H,3H,6H,9H,10H,11H,12H,13H-cyclopenta[k]1-oxa-5,8-diazacyclododecane-9-carboxylic acid

Traditional Name

(2S,6E)-3-{[(2S,3R)-6-amino-2-{[(2S)-5-chloro-1-hydroxy-4-methyl-2-[(1,2,2-trihydroxyethylidene)amino]pentylidene]amino}-1,3-dihydroxyhexylidene]amino}-6-(chloromethylidene)-4,7,12-trihydroxy-2-isopropyl-11-oxo-2H,3H,9H,10H,12H,13H-cyclopenta[k]1-oxa-5,8-diazacyclododecane-9-carboxylic acid

CAS Registry Number

Not Available

SMILES

[H]C(Cl)=C1N=C(O)C([H])(N=C(O)[C@@]([H])(N=C(O)[C@]([H])(CC([H])(C)CCl)N=C(O)C(O)O)[C@]([H])(O)CCCN)[C@@]([H])(OC2=C(CC([H])(N=C1O)C(O)=O)C(=O)C([H])(O)C2)C(C)C

InChI Identifier

InChI=1S/C31H46Cl2N6O13/c1-12(2)24-22(28(46)37-17(11-33)26(44)36-16(30(48)49)8-14-20(52-24)9-19(41)23(14)42)39-27(45)21(18(40)5-4-6-34)38-25(43)15(7-13(3)10-32)35-29(47)31(50)51/h11-13,15-16,18-19,21-22,24,31,40-41,50-51H,4-10,34H2,1-3H3,(H,35,47)(H,36,44)(H,37,46)(H,38,43)(H,39,45)(H,48,49)/b17-11-/t13?,15-,16?,18+,19?,21-,22?,24-/m0/s1

InChI Key

QONZIYSJSHZYDF-AAYVCULRSA-N

Chemical Taxonomy

Functional Ontology

Not Available

Physical Properties

State

Expected Solid

Predicted Properties

Property	Value	Source
Water Solubility	0.079 g/L	ALOGPS
logP	-1.3	ALOGPS
logP	-2.3	ChemAxon
logS	-4	ALOGPS
pKa (Strongest Acidic)	1.65	ChemAxon
pKa (Strongest Basic)	9.9	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	19	ChemAxon
Hydrogen Donor Count	11	ChemAxon
Polar Surface Area	333.49 Å²	ChemAxon
Rotatable Bond Count	15	ChemAxon
Refractivity	184.67 m³·mol⁻¹	ChemAxon
Polarizability	75.91 Å³	ChemAxon
Number of Rings	2	ChemAxon
Bioavailability	No	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

Spectra

Spectrum Type	Description	Splash Key	Deposition Date	View
Predicted GC-MS	Predicted GC-MS Spectrum - GC-MS (TMS_1_5) - 70eV, Positive	Not Available	2022-08-08	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 10V, Positive	Not Available	2022-08-10	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 20V, Positive	Not Available	2022-08-10	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 40V, Positive	Not Available	2022-08-10	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 10V, Negative	Not Available	2022-08-10	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 20V, Negative	Not Available	2022-08-10	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 40V, Negative	Not Available	2022-08-10	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 100 MHz, H₂O, predicted)		2022-08-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)		2022-08-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 1000 MHz, H₂O, predicted)		2022-08-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)		2022-08-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 200 MHz, H₂O, predicted)		2022-08-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)		2022-08-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 300 MHz, H₂O, predicted)		2022-08-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)		2022-08-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 400 MHz, H₂O, predicted)		2022-08-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)		2022-08-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 500 MHz, H₂O, predicted)		2022-08-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)		2022-08-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 600 MHz, H₂O, predicted)		2022-08-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)		2022-08-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 700 MHz, H₂O, predicted)		2022-08-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)		2022-08-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 800 MHz, H₂O, predicted)		2022-08-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)		2022-08-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 900 MHz, H₂O, predicted)		2022-08-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)		2022-08-20	View Spectrum

Biological Properties

Cellular Locations

Not Available

Biospecimen Locations

Not Available

Tissue Locations

Not Available

Associated OMIM IDs

114500 (Colorectal cancer)
610247 (Eosinophilic esophagitis)

Human Proteins and Enzymes

Protein ID	Protein Name	Protein Type	Uniprot ID	Species

Human Pathways

Pathways

Name	SMPDB/PathBank

Metabolic Reactions

Not Available

Health Effects and Bioactivity

Health Outcome/Bioactivity	Metabolite Response/Effect	Evidence Type	Host and Biospecimen	Data Source	Reference

Microbial Sources

Superkingdom/Kingdom	Phylum	Total species	Hosts and Body Sites	Microbial Links
Eukaryota/Fungi	Ascomycota	1	Human feces	Metabolic reconstruction

Exposure Sources

Source Type	Source Sub-type	Species	Data Source	Reference

Host Biospecimen and Location

Host and Biospecimen	Status	Mean	Std	Min	Max	Units	Age	Sex	Health Condition	Data Source	Reference

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FooDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

Not Available

PDB ID

Not Available

ChEBI ID

Not Available

Food Biomarker Ontology

Not Available

References

Synthesis Reference

Not Available

General References

van Santen JA, Poynton EF, Iskakova D, McMann E, Alsup TA, Clark TN, Fergusson CH, Fewer DP, Hughes AH, McCadden CA, Parra J, Soldatou S, Rudolf JD, Janssen EM, Duncan KR, Linington RG: The Natural Products Atlas 2.0: a database of microbially-derived natural products. Nucleic Acids Res. 2022 Jan 7;50(D1):D1317-D1323. doi: 10.1093/nar/gkab941. [PubMed:34718710 ]

Showing metabocard for Victorin B (MMDBc0014826)

MOL for #<Metabolite:0x0000559d018d3828>

3D MOL for #<Metabolite:0x0000559d018d3828>

3D SDF for #<Metabolite:0x0000559d018d3828>

3D-SDF for #<Metabolite:0x0000559d018d3828>

PDB for #<Metabolite:0x0000559d018d3828>

3D PDB for #<Metabolite:0x0000559d018d3828>

SMILES for #<Metabolite:0x0000559d018d3828>

INCHI for #<Metabolite:0x0000559d018d3828>

Structure for #<Metabolite:0x0000559d018d3828>

3D Structure for #<Metabolite:0x0000559d018d3828>