MiMeDB: Showing metabocard for Penitrem E (MMDBc0018086)

Record Information

Version

1.0

Status

Detected and Quantified

Creation Date

2021-05-15 08:20:24 UTC

Update Date

2022-08-31 06:43:23 UTC

Metabolite ID

MMDBc0018086

Metabolite Identification

Common Name

Penitrem E

Description

Penitrem E, also known as tremortin b or penitrems, belongs to the class of organic compounds known as naphthopyrans. Naphthopyrans are compounds containing a pyran ring fused to a naphthalene moiety. Furan is a 6 membered-ring non-aromatic ring with five carbon and one oxygen atoms. Naphthalene is a polycyclic aromatic hydrocarbon made up of two fused benzene rings. Penitrem E is an extremely weak basic (essentially neutral) compound (based on its pKa).

Structure

MOL SDF PDB SMILES InChI


  Mrv1652305152110202D          

 52 61  0  0  1  0            999 V2000
    4.2155   -1.7697    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.8867   -0.3791    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   14.3573   -0.5001    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.7689    1.8196    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.7660    1.8756    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.7956   -1.4211    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.1375   -1.4492    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.3615   -2.0343    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.5829   -2.3070    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.7039    0.7597    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.1899   -1.8007    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.9928   -1.6109    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.9011    0.5699    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   13.1768   -1.3053    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.7530    1.1090    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4525   -0.9795    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   13.5346   -0.5619    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.5147   -1.2236    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.2698    0.1593    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   13.0697    0.1196    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   10.9574   -1.7690    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.9743    0.8364    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    6.6241   -1.2003    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   11.1106   -0.9584    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.3672   -0.6006    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.8892   -0.6857    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.4925    0.0005    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    5.2554   -0.7897    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   10.0945    0.1780    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    9.7110   -1.1005    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.2953    0.1903    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   11.2309    1.1941    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.2298   -0.8207    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    9.0327   -0.6309    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    7.6640   -0.2203    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   12.2470    0.0577    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    6.8611   -0.4101    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   10.1884   -1.9234    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    4.9267    0.6009    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.5592    0.5980    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   11.4233    0.1038    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.8212   -1.3901    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   10.4523    0.9214    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.0982    0.3801    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    9.5881    0.9204    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
   13.8110    0.4816    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
   12.0204    1.6601    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.0583   -0.5999    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.7295    0.7907    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.6896   -0.1893    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
   10.9183    0.1320    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.5324    0.9805    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
  9  8  2  0  0  0  0
 12 11  1  0  0  0  0
 13 10  1  0  0  0  0
 16  1  2  0  0  0  0
 16  2  1  0  0  0  0
 17  3  2  0  0  0  0
 17 14  1  0  0  0  0
 18  8  1  0  0  0  0
 18 14  1  0  0  0  0
 19 10  1  0  0  0  0
 20 15  1  0  0  0  0
 20 17  1  0  0  0  0
 21  9  1  0  0  0  0
 22 15  1  0  0  0  0
 23 11  1  0  0  0  0
 24 21  2  0  0  0  0
 25 24  1  0  0  0  0
 26 18  2  0  0  0  0
 26 24  1  0  0  0  0
 28 16  1  6  0  0  0
 28 27  1  0  0  0  0
 29 19  1  0  0  0  0
 29 25  1  0  0  0  0
 30 25  2  0  0  0  0
 31 27  1  0  0  0  0
 32  4  1  0  0  0  0
 32  5  1  0  0  0  0
 32 22  1  0  0  0  0
 33  6  1  6  0  0  0
 33 12  1  0  0  0  0
 34  7  1  1  0  0  0
 34 19  1  0  0  0  0
 34 30  1  0  0  0  0
 34 33  1  0  0  0  0
 35 13  1  0  0  0  0
 35 33  1  0  0  0  0
 36 20  1  0  0  0  0
 36 22  1  0  0  0  0
 36 26  1  0  0  0  0
 37 23  1  0  0  0  0
 37 31  1  0  0  0  0
 37 35  1  0  0  0  0
 38 21  1  0  0  0  0
 38 30  1  0  0  0  0
 27 39  1  6  0  0  0
 35 40  1  1  0  0  0
 36 41  1  1  0  0  0
 42 23  1  0  0  0  0
 42 28  1  0  0  0  0
 43 29  1  0  0  0  0
 43 32  1  0  0  0  0
 44 31  1  0  0  0  0
 37 44  1  1  0  0  0
 19 45  1  6  0  0  0
 20 46  1  1  0  0  0
 22 47  1  6  0  0  0
 23 48  1  1  0  0  0
 27 49  1  1  0  0  0
 28 50  1  1  0  0  0
 29 51  1  1  0  0  0
 31 52  1  6  0  0  0
M  END


  Mrv1652305152110202D          

 52 61  0  0  1  0            999 V2000
    4.2155   -1.7697    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.8867   -0.3791    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   14.3573   -0.5001    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.7689    1.8196    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.7660    1.8756    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.7956   -1.4211    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.1375   -1.4492    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.3615   -2.0343    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.5829   -2.3070    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.7039    0.7597    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.1899   -1.8007    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.9928   -1.6109    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.9011    0.5699    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   13.1768   -1.3053    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.7530    1.1090    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4525   -0.9795    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   13.5346   -0.5619    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.5147   -1.2236    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.2698    0.1593    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   13.0697    0.1196    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   10.9574   -1.7690    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.9743    0.8364    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    6.6241   -1.2003    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   11.1106   -0.9584    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.3672   -0.6006    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.8892   -0.6857    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.4925    0.0005    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    5.2554   -0.7897    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   10.0945    0.1780    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    9.7110   -1.1005    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.2953    0.1903    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   11.2309    1.1941    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.2298   -0.8207    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    9.0327   -0.6309    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    7.6640   -0.2203    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   12.2470    0.0577    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    6.8611   -0.4101    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   10.1884   -1.9234    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    4.9267    0.6009    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.5592    0.5980    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   11.4233    0.1038    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.8212   -1.3901    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   10.4523    0.9214    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.0982    0.3801    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    9.5881    0.9204    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
   13.8110    0.4816    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
   12.0204    1.6601    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.0583   -0.5999    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.7295    0.7907    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.6896   -0.1893    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
   10.9183    0.1320    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.5324    0.9805    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
  9  8  2  0  0  0  0
 12 11  1  0  0  0  0
 13 10  1  0  0  0  0
 16  1  2  0  0  0  0
 16  2  1  0  0  0  0
 17  3  2  0  0  0  0
 17 14  1  0  0  0  0
 18  8  1  0  0  0  0
 18 14  1  0  0  0  0
 19 10  1  0  0  0  0
 20 15  1  0  0  0  0
 20 17  1  0  0  0  0
 21  9  1  0  0  0  0
 22 15  1  0  0  0  0
 23 11  1  0  0  0  0
 24 21  2  0  0  0  0
 25 24  1  0  0  0  0
 26 18  2  0  0  0  0
 26 24  1  0  0  0  0
 28 16  1  6  0  0  0
 28 27  1  0  0  0  0
 29 19  1  0  0  0  0
 29 25  1  0  0  0  0
 30 25  2  0  0  0  0
 31 27  1  0  0  0  0
 32  4  1  0  0  0  0
 32  5  1  0  0  0  0
 32 22  1  0  0  0  0
 33  6  1  6  0  0  0
 33 12  1  0  0  0  0
 34  7  1  1  0  0  0
 34 19  1  0  0  0  0
 34 30  1  0  0  0  0
 34 33  1  0  0  0  0
 35 13  1  0  0  0  0
 35 33  1  0  0  0  0
 36 20  1  0  0  0  0
 36 22  1  0  0  0  0
 36 26  1  0  0  0  0
 37 23  1  0  0  0  0
 37 31  1  0  0  0  0
 37 35  1  0  0  0  0
 38 21  1  0  0  0  0
 38 30  1  0  0  0  0
 27 39  1  6  0  0  0
 35 40  1  1  0  0  0
 36 41  1  1  0  0  0
 42 23  1  0  0  0  0
 42 28  1  0  0  0  0
 43 29  1  0  0  0  0
 43 32  1  0  0  0  0
 44 31  1  0  0  0  0
 37 44  1  1  0  0  0
 19 45  1  6  0  0  0
 20 46  1  1  0  0  0
 22 47  1  6  0  0  0
 23 48  1  1  0  0  0
 27 49  1  1  0  0  0
 28 50  1  1  0  0  0
 29 51  1  1  0  0  0
 31 52  1  6  0  0  0
M  END
> <DATABASE_ID>
MMDBc0018086

> <DATABASE_NAME>
MIME

> <SMILES>
[H][C@]12O[C@@]11[C@]([H])(CC[C@]3(C)[C@@]4(C)C5=C6C7=C(N5)C=CC5=C7[C@@]7(O)[C@]([H])(C[C@]7([H])C(C)(C)O[C@@]6([H])[C@]4([H])CC[C@@]13O)C(=C)C5)O[C@]([H])(C(C)=C)[C@]2([H])O

> <INCHI_IDENTIFIER>
InChI=1S/C37H45NO6/c1-16(2)28-27(39)31-37(44-31)23(42-28)11-12-33(6)34(7)19(10-13-35(33,37)40)29-25-24-21(38-30(25)34)9-8-18-14-17(3)20-15-22(32(4,5)43-29)36(20,41)26(18)24/h8-9,19-20,22-23,27-29,31,38-41H,1,3,10-15H2,2,4-7H3/t19-,20+,22+,23-,27-,28+,29-,31+,33+,34+,35-,36+,37-/m0/s1

> <INCHI_KEY>
LTCFBVUSILPMGG-BRSLXYMHSA-N

> <FORMULA>
C37H45NO6

> <MOLECULAR_WEIGHT>
599.768

> <EXACT_MASS>
599.324688173

> <JCHEM_ACCEPTOR_COUNT>
6

> <JCHEM_ATOM_COUNT>
89

> <JCHEM_AVERAGE_POLARIZABILITY>
68.76537199696992

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
4

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
(1S,2R,5S,6S,8R,9S,10R,12S,15R,16S,25R,27S,28R)-15,16,33,33-tetramethyl-24-methylidene-10-(prop-1-en-2-yl)-7,11,32-trioxa-18-azadecacyclo[25.4.2.0^{2,16}.0^{5,15}.0^{6,8}.0^{6,12}.0^{17,31}.0^{19,30}.0^{22,29}.0^{25,28}]tritriaconta-17(31),19(30),20,22(29)-tetraene-5,9,28-triol

> <ALOGPS_LOGP>
4.36

> <JCHEM_LOGP>
3.716805713333333

> <ALOGPS_LOGS>
-5.31

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
10

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
13.263621970591856

> <JCHEM_PKA_STRONGEST_ACIDIC>
12.737068484035692

> <JCHEM_PKA_STRONGEST_BASIC>
-3.402851881901393

> <JCHEM_POLAR_SURFACE_AREA>
107.47000000000001

> <JCHEM_REFRACTIVITY>
164.1414

> <JCHEM_ROTATABLE_BOND_COUNT>
1

> <JCHEM_RULE_OF_FIVE>
0

> <ALOGPS_SOLUBILITY>
2.97e-03 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(1S,2R,5S,6S,8R,9S,10R,12S,15R,16S,25R,27S,28R)-15,16,33,33-tetramethyl-24-methylidene-10-(prop-1-en-2-yl)-7,11,32-trioxa-18-azadecacyclo[25.4.2.0^{2,16}.0^{5,15}.0^{6,8}.0^{6,12}.0^{17,31}.0^{19,30}.0^{22,29}.0^{25,28}]tritriaconta-17(31),19(30),20,22(29)-tetraene-5,9,28-triol

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 15-MAY-21   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   15-MAY-21         0                                  
HETATM    1  C   UNK     0       7.869  -3.303   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       7.255  -0.708   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0      26.800  -0.933   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0      21.969   3.397   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0      20.097   3.501   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0      16.418  -2.653   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0      17.057  -2.705   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0      23.075  -3.797   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0      21.621  -4.306   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0      16.247   1.418   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0      13.421  -3.361   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0      14.920  -3.007   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0      14.749   1.064   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0      24.597  -2.437   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0      23.806   2.070   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0       8.311  -1.828   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0      25.265  -1.049   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0      23.361  -2.284   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0      17.304   0.297   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0      24.397   0.223   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0      20.454  -3.302   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0      22.352   1.561   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0      12.365  -2.241   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0      20.740  -1.789   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0      19.352  -1.121   0.000  0.00  0.00           C+0
HETATM   26  C   UNK     0      22.193  -1.280   0.000  0.00  0.00           C+0
HETATM   27  C   UNK     0      10.253   0.001   0.000  0.00  0.00           C+0
HETATM   28  C   UNK     0       9.810  -1.474   0.000  0.00  0.00           C+0
HETATM   29  C   UNK     0      18.843   0.332   0.000  0.00  0.00           C+0
HETATM   30  C   UNK     0      18.127  -2.054   0.000  0.00  0.00           C+0
HETATM   31  C   UNK     0      11.751   0.355   0.000  0.00  0.00           C+0
HETATM   32  C   UNK     0      20.964   2.229   0.000  0.00  0.00           C+0
HETATM   33  C   UNK     0      15.362  -1.532   0.000  0.00  0.00           C+0
HETATM   34  C   UNK     0      16.861  -1.178   0.000  0.00  0.00           C+0
HETATM   35  C   UNK     0      14.306  -0.411   0.000  0.00  0.00           C+0
HETATM   36  C   UNK     0      22.861   0.108   0.000  0.00  0.00           C+0
HETATM   37  C   UNK     0      12.807  -0.765   0.000  0.00  0.00           C+0
HETATM   38  N   UNK     0      19.018  -3.590   0.000  0.00  0.00           N+0
HETATM   39  O   UNK     0       9.196   1.122   0.000  0.00  0.00           O+0
HETATM   40  O   UNK     0      14.110   1.116   0.000  0.00  0.00           O+0
HETATM   41  O   UNK     0      21.323   0.194   0.000  0.00  0.00           O+0
HETATM   42  O   UNK     0      10.866  -2.595   0.000  0.00  0.00           O+0
HETATM   43  O   UNK     0      19.511   1.720   0.000  0.00  0.00           O+0
HETATM   44  O   UNK     0      13.250   0.710   0.000  0.00  0.00           O+0
HETATM   45  H   UNK     0      17.898   1.718   0.000  0.00  0.00           H+0
HETATM   46  H   UNK     0      25.781   0.899   0.000  0.00  0.00           H+0
HETATM   47  H   UNK     0      22.438   3.099   0.000  0.00  0.00           H+0
HETATM   48  H   UNK     0      11.309  -1.120   0.000  0.00  0.00           H+0
HETATM   49  H   UNK     0      10.695   1.476   0.000  0.00  0.00           H+0
HETATM   50  H   UNK     0       8.754  -0.353   0.000  0.00  0.00           H+0
HETATM   51  H   UNK     0      20.381   0.246   0.000  0.00  0.00           H+0
HETATM   52  H   UNK     0      12.194   1.830   0.000  0.00  0.00           H+0
CONECT    1   16                                                            
CONECT    2   16                                                            
CONECT    3   17                                                            
CONECT    4   32                                                            
CONECT    5   32                                                            
CONECT    6   33                                                            
CONECT    7   34                                                            
CONECT    8    9   18                                                       
CONECT    9    8   21                                                       
CONECT   10   13   19                                                       
CONECT   11   12   23                                                       
CONECT   12   11   33                                                       
CONECT   13   10   35                                                       
CONECT   14   17   18                                                       
CONECT   15   20   22                                                       
CONECT   16    1    2   28                                                  
CONECT   17    3   14   20                                                  
CONECT   18    8   14   26                                                  
CONECT   19   10   29   34   45                                             
CONECT   20   15   17   36   46                                             
CONECT   21    9   24   38                                                  
CONECT   22   15   32   36   47                                             
CONECT   23   11   37   42   48                                             
CONECT   24   21   25   26                                                  
CONECT   25   24   29   30                                                  
CONECT   26   18   24   36                                                  
CONECT   27   28   31   39   49                                             
CONECT   28   16   27   42   50                                             
CONECT   29   19   25   43   51                                             
CONECT   30   25   34   38                                                  
CONECT   31   27   37   44   52                                             
CONECT   32    4    5   22   43                                             
CONECT   33    6   12   34   35                                             
CONECT   34    7   19   30   33                                             
CONECT   35   13   33   37   40                                             
CONECT   36   20   22   26   41                                             
CONECT   37   23   31   35   44                                             
CONECT   38   21   30                                                       
CONECT   39   27                                                            
CONECT   40   35                                                            
CONECT   41   36                                                            
CONECT   42   23   28                                                       
CONECT   43   29   32                                                       
CONECT   44   31   37                                                       
CONECT   45   19                                                            
CONECT   46   20                                                            
CONECT   47   22                                                            
CONECT   48   23                                                            
CONECT   49   27                                                            
CONECT   50   28                                                            
CONECT   51   29                                                            
CONECT   52   31                                                            
MASTER        0    0    0    0    0    0    0    0   52    0  122    0
END

Synonyms

Value	Source
Penitrems	MeSH
Penitrem b	MeSH
Tremortin b	MeSH
Penitrem a	MeSH
Penitrem D	MeSH
Tremortin	MeSH
Tremortin a	MeSH

Molecular Formula

C₃₇H₄₅NO₆

Average Mass

599.768

Monoisotopic Mass

599.324688173

IUPAC Name

(1S,2R,5S,6S,8R,9S,10R,12S,15R,16S,25R,27S,28R)-15,16,33,33-tetramethyl-24-methylidene-10-(prop-1-en-2-yl)-7,11,32-trioxa-18-azadecacyclo[25.4.2.0^{2,16}.0^{5,15}.0^{6,8}.0^{6,12}.0^{17,31}.0^{19,30}.0^{22,29}.0^{25,28}]tritriaconta-17(31),19(30),20,22(29)-tetraene-5,9,28-triol

Traditional Name

CAS Registry Number

Not Available

SMILES

[H][C@]12O[C@@]11[C@]([H])(CC[C@]3(C)[C@@]4(C)C5=C6C7=C(N5)C=CC5=C7[C@@]7(O)[C@]([H])(C[C@]7([H])C(C)(C)O[C@@]6([H])[C@]4([H])CC[C@@]13O)C(=C)C5)O[C@]([H])(C(C)=C)[C@]2([H])O

InChI Identifier

InChI=1S/C37H45NO6/c1-16(2)28-27(39)31-37(44-31)23(42-28)11-12-33(6)34(7)19(10-13-35(33,37)40)29-25-24-21(38-30(25)34)9-8-18-14-17(3)20-15-22(32(4,5)43-29)36(20,41)26(18)24/h8-9,19-20,22-23,27-29,31,38-41H,1,3,10-15H2,2,4-7H3/t19-,20+,22+,23-,27-,28+,29-,31+,33+,34+,35-,36+,37-/m0/s1

InChI Key

LTCFBVUSILPMGG-BRSLXYMHSA-N

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as naphthopyrans. Naphthopyrans are compounds containing a pyran ring fused to a naphthalene moiety. Furan is a 6 membered-ring non-aromatic ring with five carbon and one oxygen atoms. Naphthalene is a polycyclic aromatic hydrocarbon made up of two fused benzene rings.

Kingdom

Organic compounds

Super Class

Organoheterocyclic compounds

Class

Naphthopyrans

Sub Class

Not Available

Direct Parent

Naphthopyrans

Alternative Parents

Substituents

Naphthopyran
Naphthalene
Tetralin
3-alkylindole
Indole
Indole or derivatives
1,4-dioxepane
Dioxepane
Monosaccharide
Oxane
Pyran
Benzenoid
Pyrrole
Tertiary alcohol
Heteroaromatic compound
Cyclic alcohol
Cyclobutanol
Secondary alcohol
Polyol
Azacycle
Oxacycle
Dialkyl ether
Oxirane
Ether
Alcohol
Organopnictogen compound
Organic oxygen compound
Hydrocarbon derivative
Organic nitrogen compound
Organonitrogen compound
Organooxygen compound
Aromatic heteropolycyclic compound

Molecular Framework

Aromatic heteropolycyclic compounds

External Descriptors

Not Available

Functional Ontology

Not Available

Physical Properties

State

Expected Solid

Predicted Properties

Property	Value	Source
Water Solubility	0.003 g/L	ALOGPS
logP	4.36	ALOGPS
logP	3.72	ChemAxon
logS	-5.3	ALOGPS
pKa (Strongest Acidic)	12.74	ChemAxon
pKa (Strongest Basic)	-3.4	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	6	ChemAxon
Hydrogen Donor Count	4	ChemAxon
Polar Surface Area	107.47 Å²	ChemAxon
Rotatable Bond Count	1	ChemAxon
Refractivity	164.14 m³·mol⁻¹	ChemAxon
Polarizability	68.77 Å³	ChemAxon
Number of Rings	10	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

Spectra

Not Available

Biological Properties

Cellular Locations

Not Available

Biospecimen Locations

Not Available

Tissue Locations

Not Available

Associated OMIM IDs

114500 (Colorectal cancer)
610247 (Eosinophilic esophagitis)

Human Proteins and Enzymes

Protein ID	Protein Name	Protein Type	Uniprot ID	Species

Human Pathways

Pathways

Name	SMPDB/PathBank

Metabolic Reactions

Not Available

Health Effects and Bioactivity

Health Outcome/Bioactivity	Metabolite Response/Effect	Evidence Type	Host and Biospecimen	Data Source	Reference

Microbial Sources

Superkingdom/Kingdom	Phylum	Total species	Hosts and Body Sites	Microbial Links
Eukaryota/Fungi	Ascomycota	2	Human feces	Metabolic reconstruction

Exposure Sources

Source Type	Source Sub-type	Species	Data Source	Reference

Host Biospecimen and Location

Host and Biospecimen	Status	Mean	Std	Min	Max	Units	Age	Sex	Health Condition	Data Source	Reference

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FooDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

2342794

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

3086087

PDB ID

Not Available

ChEBI ID

Not Available

Food Biomarker Ontology

Not Available

References

Synthesis Reference

Not Available

General References

van Santen JA, Poynton EF, Iskakova D, McMann E, Alsup TA, Clark TN, Fergusson CH, Fewer DP, Hughes AH, McCadden CA, Parra J, Soldatou S, Rudolf JD, Janssen EM, Duncan KR, Linington RG: The Natural Products Atlas 2.0: a database of microbially-derived natural products. Nucleic Acids Res. 2022 Jan 7;50(D1):D1317-D1323. doi: 10.1093/nar/gkab941. [PubMed:34718710 ]

Showing metabocard for Penitrem E (MMDBc0018086)

MOL for #<Metabolite:0x00007fece9150bc0>

3D MOL for #<Metabolite:0x00007fece9150bc0>

3D SDF for #<Metabolite:0x00007fece9150bc0>

3D-SDF for #<Metabolite:0x00007fece9150bc0>

PDB for #<Metabolite:0x00007fece9150bc0>

3D PDB for #<Metabolite:0x00007fece9150bc0>

SMILES for #<Metabolite:0x00007fece9150bc0>

INCHI for #<Metabolite:0x00007fece9150bc0>

Structure for #<Metabolite:0x00007fece9150bc0>

3D Structure for #<Metabolite:0x00007fece9150bc0>