MiMeDB: Showing metabocard for Pyrrospirone D (MMDBc0022989)

Record Information

Version

1.0

Status

Detected and Quantified

Creation Date

2021-05-15 13:02:01 UTC

Update Date

2022-08-31 06:48:08 UTC

Metabolite ID

MMDBc0022989

Metabolite Identification

Common Name

Pyrrospirone D

Description

(1R,3S,4S,7S,8S,10R,12S,13R,14S,21R,25R,26S)-3,23-dihydroxy-21-methoxy-4,6,8,10,12-pentamethyl-15-oxa-22-azaheptacyclo[12.9.3.2¹⁶,¹⁹.1¹,²¹.0⁴,²⁵.0⁷,²⁶.0⁸,¹³]nonacosa-5,16,18,22,28-pentaen-24-one belongs to the class of organic compounds known as prostaglandins and related compounds. These are unsaturated carboxylic acids consisting of a 20 carbon skeleton that also contains a five member ring, and are based upon the fatty acid arachidonic acid. Based on a literature review very few articles have been published on (1R,3S,4S,7S,8S,10R,12S,13R,14S,21R,25R,26S)-3,23-dihydroxy-21-methoxy-4,6,8,10,12-pentamethyl-15-oxa-22-azaheptacyclo[12.9.3.2¹⁶,¹⁹.1¹,²¹.0⁴,²⁵.0⁷,²⁶.0⁸,¹³]nonacosa-5,16,18,22,28-pentaen-24-one.

Structure

MOL SDF PDB SMILES InChI


  Mrv1652305152115022D          

 47 53  0  0  1  0            999 V2000
    8.0323    0.0413    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.3192    2.8088    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.3378   -0.5210    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0577   -0.0195    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.7785    0.2446    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.5902   -1.8095    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.0035    0.5507    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.2570    0.6888    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.8493    1.3189    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.1488    1.5442    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.6758    1.4251    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.6557    0.4244    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.0006    0.0246    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.7659   -0.3379    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4866    1.3167    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.3807    0.3216    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.4546    0.6303    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    7.0980    2.0140    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    4.8562    0.1489    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.5801    0.1266    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.3777    1.9267    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8458    0.8989    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    4.9439    1.7458    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    5.2724    0.9713    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    6.2991    1.8082    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    4.0465    1.6334    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    5.7003    2.2979    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    4.6356    1.1940    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4166   -0.4867    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5554    0.6386    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    6.0780    1.0134    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    4.3849    0.4744    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    5.8316   -0.4011    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    5.1491   -0.9094    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    2.0261    0.8058    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.4244    1.4356    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.7090   -0.9110    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.1175   -1.1750    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.6210    2.4704    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    8.0929    1.1529    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.2998    2.2226    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.5664    1.6751    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.6398    2.5127    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.5072    0.6630    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.5321    1.0167    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.7872    2.4166    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.3731    3.0552    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
  9  7  1  0  0  0  0
 10  8  2  0  0  0  0
 17  1  1  1  0  0  0
 17 11  1  0  0  0  0
 17 12  1  0  0  0  0
 18  2  1  1  0  0  0
 18 11  1  0  0  0  0
 19  3  1  0  0  0  0
 19 13  2  0  0  0  0
 20  7  2  0  0  0  0
 20  8  1  0  0  0  0
 20 14  1  0  0  0  0
 21  9  2  0  0  0  0
 21 10  1  0  0  0  0
 22 15  1  0  0  0  0
 24 19  1  0  0  0  0
 24 23  1  0  0  0  0
 25 18  1  0  0  0  0
 26 23  1  0  0  0  0
 27 23  1  0  0  0  0
 27 25  1  0  0  0  0
 28 26  1  0  0  0  0
 30  4  1  1  0  0  0
 30 13  1  0  0  0  0
 30 22  1  0  0  0  0
 30 26  1  0  0  0  0
 31  5  1  6  0  0  0
 31 12  1  0  0  0  0
 31 24  1  0  0  0  0
 31 25  1  0  0  0  0
 32 15  1  0  0  0  0
 32 16  1  1  0  0  0
 32 28  1  0  0  0  0
 32 29  1  0  0  0  0
 33 14  1  0  0  0  0
 33 16  1  0  0  0  0
 34 29  2  0  0  0  0
 34 33  1  0  0  0  0
 22 35  1  1  0  0  0
 36 28  2  0  0  0  0
 37 29  1  0  0  0  0
 38  6  1  0  0  0  0
 33 38  1  1  0  0  0
 39 21  1  0  0  0  0
 39 27  1  0  0  0  0
 17 40  1  6  0  0  0
 18 41  1  6  0  0  0
 22 42  1  6  0  0  0
 23 43  1  6  0  0  0
 24 44  1  1  0  0  0
 25 45  1  1  0  0  0
 26 46  1  6  0  0  0
 27 47  1  1  0  0  0
M  END


  Mrv1652305152115022D          

 47 53  0  0  1  0            999 V2000
    8.0323    0.0413    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.3192    2.8088    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.3378   -0.5210    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0577   -0.0195    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.7785    0.2446    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.5902   -1.8095    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.0035    0.5507    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.2570    0.6888    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.8493    1.3189    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.1488    1.5442    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.6758    1.4251    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.6557    0.4244    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.0006    0.0246    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.7659   -0.3379    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4866    1.3167    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.3807    0.3216    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.4546    0.6303    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    7.0980    2.0140    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    4.8562    0.1489    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.5801    0.1266    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.3777    1.9267    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8458    0.8989    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    4.9439    1.7458    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    5.2724    0.9713    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    6.2991    1.8082    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    4.0465    1.6334    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    5.7003    2.2979    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    4.6356    1.1940    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4166   -0.4867    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5554    0.6386    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    6.0780    1.0134    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    4.3849    0.4744    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    5.8316   -0.4011    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    5.1491   -0.9094    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    2.0261    0.8058    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.4244    1.4356    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.7090   -0.9110    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.1175   -1.1750    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.6210    2.4704    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    8.0929    1.1529    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.2998    2.2226    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.5664    1.6751    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.6398    2.5127    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.5072    0.6630    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.5321    1.0167    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.7872    2.4166    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.3731    3.0552    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
  9  7  1  0  0  0  0
 10  8  2  0  0  0  0
 17  1  1  1  0  0  0
 17 11  1  0  0  0  0
 17 12  1  0  0  0  0
 18  2  1  1  0  0  0
 18 11  1  0  0  0  0
 19  3  1  0  0  0  0
 19 13  2  0  0  0  0
 20  7  2  0  0  0  0
 20  8  1  0  0  0  0
 20 14  1  0  0  0  0
 21  9  2  0  0  0  0
 21 10  1  0  0  0  0
 22 15  1  0  0  0  0
 24 19  1  0  0  0  0
 24 23  1  0  0  0  0
 25 18  1  0  0  0  0
 26 23  1  0  0  0  0
 27 23  1  0  0  0  0
 27 25  1  0  0  0  0
 28 26  1  0  0  0  0
 30  4  1  1  0  0  0
 30 13  1  0  0  0  0
 30 22  1  0  0  0  0
 30 26  1  0  0  0  0
 31  5  1  6  0  0  0
 31 12  1  0  0  0  0
 31 24  1  0  0  0  0
 31 25  1  0  0  0  0
 32 15  1  0  0  0  0
 32 16  1  1  0  0  0
 32 28  1  0  0  0  0
 32 29  1  0  0  0  0
 33 14  1  0  0  0  0
 33 16  1  0  0  0  0
 34 29  2  0  0  0  0
 34 33  1  0  0  0  0
 22 35  1  1  0  0  0
 36 28  2  0  0  0  0
 37 29  1  0  0  0  0
 38  6  1  0  0  0  0
 33 38  1  1  0  0  0
 39 21  1  0  0  0  0
 39 27  1  0  0  0  0
 17 40  1  6  0  0  0
 18 41  1  6  0  0  0
 22 42  1  6  0  0  0
 23 43  1  6  0  0  0
 24 44  1  1  0  0  0
 25 45  1  1  0  0  0
 26 46  1  6  0  0  0
 27 47  1  1  0  0  0
M  END
> <DATABASE_ID>
MMDBc0022989

> <DATABASE_NAME>
MIME

> <SMILES>
[H][C@]12OC3=CC=C(C[C@]4(C[C@]5(C[C@]([H])(O)[C@@]6(C)C=C(C)[C@]([H])([C@@]1([H])[C@@]6([H])C5=O)[C@]1(C)C[C@]([H])(C)C[C@]([H])(C)[C@@]21[H])C(O)=N4)OC)C=C3

> <INCHI_IDENTIFIER>
InChI=1S/C33H43NO5/c1-17-11-18(2)25-27-23-24(31(25,5)12-17)19(3)13-30(4)22(35)15-32(28(36)26(23)30)16-33(38-6,34-29(32)37)14-20-7-9-21(39-27)10-8-20/h7-10,13,17-18,22-27,35H,11-12,14-16H2,1-6H3,(H,34,37)/t17-,18+,22+,23+,24-,25+,26+,27+,30-,31+,32+,33-/m1/s1

> <INCHI_KEY>
ZQWRYWUCSVPDSS-LYERDLQISA-N

> <FORMULA>
C33H43NO5

> <MOLECULAR_WEIGHT>
533.709

> <EXACT_MASS>
533.314123489

> <JCHEM_ACCEPTOR_COUNT>
6

> <JCHEM_ATOM_COUNT>
82

> <JCHEM_AVERAGE_POLARIZABILITY>
59.72277643981639

> <JCHEM_BIOAVAILABILITY>
0

> <JCHEM_DONOR_COUNT>
2

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
(1R,3S,4S,7S,8S,10R,12S,13R,14S,21R,25R,26S)-3,23-dihydroxy-21-methoxy-4,6,8,10,12-pentamethyl-15-oxa-22-azaheptacyclo[12.9.3.2^{16,19}.1^{1,21}.0^{4,25}.0^{7,26}.0^{8,13}]nonacosa-5,16,18,22,28-pentaen-24-one

> <ALOGPS_LOGP>
4.20

> <JCHEM_LOGP>
5.375236155999998

> <ALOGPS_LOGS>
-5.67

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
7

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
14.604194277133253

> <JCHEM_PKA_STRONGEST_ACIDIC>
4.169005811697646

> <JCHEM_PKA_STRONGEST_BASIC>
-0.5305830479121573

> <JCHEM_POLAR_SURFACE_AREA>
88.35000000000001

> <JCHEM_REFRACTIVITY>
149.621

> <JCHEM_ROTATABLE_BOND_COUNT>
1

> <JCHEM_RULE_OF_FIVE>
0

> <ALOGPS_SOLUBILITY>
1.15e-03 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(1R,3S,4S,7S,8S,10R,12S,13R,14S,21R,25R,26S)-3,23-dihydroxy-21-methoxy-4,6,8,10,12-pentamethyl-15-oxa-22-azaheptacyclo[12.9.3.2^{16,19}.1^{1,21}.0^{4,25}.0^{7,26}.0^{8,13}]nonacosa-5,16,18,22,28-pentaen-24-one

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 15-MAY-21   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   15-MAY-21         0                                  
HETATM    1  C   UNK     0      14.994   0.077   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0      13.663   5.243   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0       9.964  -0.972   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       5.708  -0.036   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0      10.787   0.457   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0      10.435  -3.378   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0      13.073   1.028   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0      15.413   1.286   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0      12.785   2.462   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0      15.211   2.882   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0      14.328   2.660   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0      12.424   0.792   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       7.468   0.046   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0      12.630  -0.631   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0       6.508   2.458   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0      10.044   0.600   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0      13.915   1.176   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0      13.250   3.759   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0       9.065   0.278   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0      14.149   0.236   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0      13.772   3.597   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0       5.312   1.678   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0       9.229   3.259   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0       9.842   1.813   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0      11.758   3.375   0.000  0.00  0.00           C+0
HETATM   26  C   UNK     0       7.553   3.049   0.000  0.00  0.00           C+0
HETATM   27  C   UNK     0      10.641   4.289   0.000  0.00  0.00           C+0
HETATM   28  C   UNK     0       8.653   2.229   0.000  0.00  0.00           C+0
HETATM   29  C   UNK     0       8.244  -0.909   0.000  0.00  0.00           C+0
HETATM   30  C   UNK     0       6.637   1.192   0.000  0.00  0.00           C+0
HETATM   31  C   UNK     0      11.346   1.892   0.000  0.00  0.00           C+0
HETATM   32  C   UNK     0       8.185   0.886   0.000  0.00  0.00           C+0
HETATM   33  C   UNK     0      10.886  -0.749   0.000  0.00  0.00           C+0
HETATM   34  N   UNK     0       9.612  -1.698   0.000  0.00  0.00           N+0
HETATM   35  O   UNK     0       3.782   1.504   0.000  0.00  0.00           O+0
HETATM   36  O   UNK     0      10.126   2.680   0.000  0.00  0.00           O+0
HETATM   37  O   UNK     0       6.924  -1.701   0.000  0.00  0.00           O+0
HETATM   38  O   UNK     0      11.419  -2.193   0.000  0.00  0.00           O+0
HETATM   39  O   UNK     0      12.359   4.611   0.000  0.00  0.00           O+0
HETATM   40  H   UNK     0      15.107   2.152   0.000  0.00  0.00           H+0
HETATM   41  H   UNK     0      11.760   4.149   0.000  0.00  0.00           H+0
HETATM   42  H   UNK     0       4.791   3.127   0.000  0.00  0.00           H+0
HETATM   43  H   UNK     0       8.661   4.690   0.000  0.00  0.00           H+0
HETATM   44  H   UNK     0       8.413   1.238   0.000  0.00  0.00           H+0
HETATM   45  H   UNK     0      12.193   1.898   0.000  0.00  0.00           H+0
HETATM   46  H   UNK     0       7.069   4.511   0.000  0.00  0.00           H+0
HETATM   47  H   UNK     0      10.030   5.703   0.000  0.00  0.00           H+0
CONECT    1   17                                                            
CONECT    2   18                                                            
CONECT    3   19                                                            
CONECT    4   30                                                            
CONECT    5   31                                                            
CONECT    6   38                                                            
CONECT    7    9   20                                                       
CONECT    8   10   20                                                       
CONECT    9    7   21                                                       
CONECT   10    8   21                                                       
CONECT   11   17   18                                                       
CONECT   12   17   31                                                       
CONECT   13   19   30                                                       
CONECT   14   20   33                                                       
CONECT   15   22   32                                                       
CONECT   16   32   33                                                       
CONECT   17    1   11   12   40                                             
CONECT   18    2   11   25   41                                             
CONECT   19    3   13   24                                                  
CONECT   20    7    8   14                                                  
CONECT   21    9   10   39                                                  
CONECT   22   15   30   35   42                                             
CONECT   23   24   26   27   43                                             
CONECT   24   19   23   31   44                                             
CONECT   25   18   27   31   45                                             
CONECT   26   23   28   30   46                                             
CONECT   27   23   25   39   47                                             
CONECT   28   26   32   36                                                  
CONECT   29   32   34   37                                                  
CONECT   30    4   13   22   26                                             
CONECT   31    5   12   24   25                                             
CONECT   32   15   16   28   29                                             
CONECT   33   14   16   34   38                                             
CONECT   34   29   33                                                       
CONECT   35   22                                                            
CONECT   36   28                                                            
CONECT   37   29                                                            
CONECT   38    6   33                                                       
CONECT   39   21   27                                                       
CONECT   40   17                                                            
CONECT   41   18                                                            
CONECT   42   22                                                            
CONECT   43   23                                                            
CONECT   44   24                                                            
CONECT   45   25                                                            
CONECT   46   26                                                            
CONECT   47   27                                                            
MASTER        0    0    0    0    0    0    0    0   47    0  106    0
END

Synonyms

Not Available

Molecular Formula

C₃₃H₄₃NO₅

Average Mass

533.709

Monoisotopic Mass

533.314123489

IUPAC Name

(1R,3S,4S,7S,8S,10R,12S,13R,14S,21R,25R,26S)-3,23-dihydroxy-21-methoxy-4,6,8,10,12-pentamethyl-15-oxa-22-azaheptacyclo[12.9.3.2^{16,19}.1^{1,21}.0^{4,25}.0^{7,26}.0^{8,13}]nonacosa-5,16,18,22,28-pentaen-24-one

Traditional Name

CAS Registry Number

Not Available

SMILES

[H][C@]12OC3=CC=C(C[C@]4(C[C@]5(C[C@]([H])(O)[C@@]6(C)C=C(C)[C@]([H])([C@@]1([H])[C@@]6([H])C5=O)[C@]1(C)C[C@]([H])(C)C[C@]([H])(C)[C@@]21[H])C(O)=N4)OC)C=C3

InChI Identifier

InChI=1S/C33H43NO5/c1-17-11-18(2)25-27-23-24(31(25,5)12-17)19(3)13-30(4)22(35)15-32(28(36)26(23)30)16-33(38-6,34-29(32)37)14-20-7-9-21(39-27)10-8-20/h7-10,13,17-18,22-27,35H,11-12,14-16H2,1-6H3,(H,34,37)/t17-,18+,22+,23+,24-,25+,26+,27+,30-,31+,32+,33-/m1/s1

InChI Key

ZQWRYWUCSVPDSS-LYERDLQISA-N

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as prostaglandins and related compounds. These are unsaturated carboxylic acids consisting of a 20 carbon skeleton that also contains a five member ring, and are based upon the fatty acid arachidonic acid.

Kingdom

Organic compounds

Super Class

Lipids and lipid-like molecules

Class

Fatty Acyls

Sub Class

Eicosanoids

Direct Parent

Prostaglandins and related compounds

Alternative Parents

Substituents

Prostaglandin skeleton
Alkyl aryl ether
Benzenoid
Cyclic carboximidic acid
Pyrroline
Cyclic alcohol
Secondary alcohol
Ketone
Oxacycle
Azacycle
Organoheterocyclic compound
Organic 1,3-dipolar compound
Propargyl-type 1,3-dipolar organic compound
Ether
Organic nitrogen compound
Organic oxygen compound
Organopnictogen compound
Organic oxide
Hydrocarbon derivative
Organooxygen compound
Organonitrogen compound
Carbonyl group
Alcohol
Aromatic heteropolycyclic compound

Molecular Framework

Aromatic heteropolycyclic compounds

External Descriptors

Not Available

Functional Ontology

Not Available

Physical Properties

State

Expected Solid

Predicted Properties

Property	Value	Source
Water Solubility	0.0012 g/L	ALOGPS
logP	4.2	ALOGPS
logP	5.38	ChemAxon
logS	-5.7	ALOGPS
pKa (Strongest Acidic)	4.17	ChemAxon
pKa (Strongest Basic)	-0.53	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	6	ChemAxon
Hydrogen Donor Count	2	ChemAxon
Polar Surface Area	88.35 Å²	ChemAxon
Rotatable Bond Count	1	ChemAxon
Refractivity	149.62 m³·mol⁻¹	ChemAxon
Polarizability	59.72 Å³	ChemAxon
Number of Rings	7	ChemAxon
Bioavailability	No	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

Spectra

Not Available

Biological Properties

Cellular Locations

Not Available

Biospecimen Locations

Not Available

Tissue Locations

Not Available

Associated OMIM IDs

114500 (Colorectal cancer)
610247 (Eosinophilic esophagitis)

Human Proteins and Enzymes

Protein ID	Protein Name	Protein Type	Uniprot ID	Species

Human Pathways

Pathways

Name	SMPDB/PathBank

Metabolic Reactions

Not Available

Health Effects and Bioactivity

Health Outcome/Bioactivity	Metabolite Response/Effect	Evidence Type	Host and Biospecimen	Data Source	Reference

Microbial Sources

Superkingdom/Kingdom	Phylum	Total species	Hosts and Body Sites	Microbial Links
Eukaryota/Fungi	Ascomycota	1	Human feces	Metabolic reconstruction

Exposure Sources

Source Type	Source Sub-type	Species	Data Source	Reference

Host Biospecimen and Location

Host and Biospecimen	Status	Mean	Std	Min	Max	Units	Age	Sex	Health Condition	Data Source	Reference

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FooDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

64835248

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

139590336

PDB ID

Not Available

ChEBI ID

Not Available

Food Biomarker Ontology

Not Available

References

Synthesis Reference

Not Available

General References

van Santen JA, Poynton EF, Iskakova D, McMann E, Alsup TA, Clark TN, Fergusson CH, Fewer DP, Hughes AH, McCadden CA, Parra J, Soldatou S, Rudolf JD, Janssen EM, Duncan KR, Linington RG: The Natural Products Atlas 2.0: a database of microbially-derived natural products. Nucleic Acids Res. 2022 Jan 7;50(D1):D1317-D1323. doi: 10.1093/nar/gkab941. [PubMed:34718710 ]

Showing metabocard for Pyrrospirone D (MMDBc0022989)

MOL for #<Metabolite:0x00007f46c3348738>

3D MOL for #<Metabolite:0x00007f46c3348738>

3D SDF for #<Metabolite:0x00007f46c3348738>

3D-SDF for #<Metabolite:0x00007f46c3348738>

PDB for #<Metabolite:0x00007f46c3348738>

3D PDB for #<Metabolite:0x00007f46c3348738>

SMILES for #<Metabolite:0x00007f46c3348738>

INCHI for #<Metabolite:0x00007f46c3348738>

Structure for #<Metabolite:0x00007f46c3348738>

3D Structure for #<Metabolite:0x00007f46c3348738>