MiMeDB: Showing metabocard for Microcolin G (MMDBc0025335)

Record Information

Version

1.0

Status

Detected and Quantified

Creation Date

2021-05-15 15:03:32 UTC

Update Date

2022-08-31 06:50:32 UTC

Metabolite ID

MMDBc0025335

Metabolite Identification

Common Name

Microcolin G

Description

Microcolin G belongs to the class of organic compounds known as hybrid peptides. Hybrid peptides are compounds containing at least two different types of amino acids (alpha, beta, gamma, delta) linked to each other through a peptide bond. Microcolin G is an extremely weak basic (essentially neutral) compound (based on its pKa).

Structure

MOL SDF PDB SMILES InChI


  Mrv1652305152117032D          

 59 60  0  0  1  0            999 V2000
   10.0509    2.1530    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   17.1956   -0.3220    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   17.9101    0.9155    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   17.9101    4.2155    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   18.6246    5.4530    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.9088    2.9780    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   14.3377    2.9780    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   23.2612    5.3099    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   20.0535    2.1530    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   15.7667    2.9780    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   20.0535    2.9780    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.7654    1.7405    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.4798    2.1530    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.1943    1.7405    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   23.3381    6.7780    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   22.7861    7.3911    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   16.4811    0.9155    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   13.6233    1.7405    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   20.4660    6.7226    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   19.3861    5.9380    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   17.1956    0.5030    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   18.6246    4.6280    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.9088    2.1530    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   14.3377    2.1530    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   22.9256    6.0635    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   19.3390    1.7405    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   19.6410    6.7226    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   16.4811    1.7405    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   20.7209    5.9380    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   22.0324    7.0555    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   18.6246    2.1530    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   19.3390    4.2155    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   17.1956    2.1530    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   15.0522    1.7405    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   21.5056    5.6830    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   18.6246    2.9780    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   20.0535    4.6280    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   17.9101    1.7405    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   15.7667    2.1530    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   19.3390    3.3905    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   20.0535    5.4530    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   22.1187    6.2351    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   19.3390    0.9155    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   19.1561    7.3900    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   21.3179    7.4680    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   17.1956    2.9780    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   15.0522    0.9155    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   21.6771    4.8761    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   17.9101    3.3905    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   20.7680    4.2155    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   12.1943    2.5655    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
   13.6233    2.5655    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
   22.4064    5.4224    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
   19.3390    2.5655    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
   18.8262    6.5935    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
   17.1956    1.3280    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
   20.8500    5.1231    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
   18.6246    1.3280    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
   19.3390    5.0405    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
 12  1  1  0  0  0  0
 13 12  1  0  0  0  0
 14 13  1  0  0  0  0
 16 15  2  0  0  0  0
 21  2  1  0  0  0  0
 21  3  1  0  0  0  0
 21 17  2  0  0  0  0
 22  4  1  0  0  0  0
 22  5  1  0  0  0  0
 23  6  1  1  0  0  0
 23 14  1  0  0  0  0
 23 18  1  0  0  0  0
 24  7  1  1  0  0  0
 24 18  1  0  0  0  0
 25  8  1  6  0  0  0
 25 15  1  0  0  0  0
 26  9  1  0  0  0  0
 27 19  1  0  0  0  0
 27 20  1  0  0  0  0
 28 17  1  0  0  0  0
 29 19  1  0  0  0  0
 30 16  1  0  0  0  0
 31 26  1  0  0  0  0
 32 22  1  0  0  0  0
 33 28  1  0  0  0  0
 34 24  1  0  0  0  0
 29 35  1  1  0  0  0
 36 31  1  0  0  0  0
 37 32  1  0  0  0  0
 31 38  1  6  0  0  0
 38 33  2  0  0  0  0
 39 10  1  0  0  0  0
 28 39  1  1  0  0  0
 39 34  1  0  0  0  0
 40 11  1  0  0  0  0
 32 40  1  6  0  0  0
 40 36  1  0  0  0  0
 41 20  1  0  0  0  0
 41 29  1  0  0  0  0
 41 37  1  0  0  0  0
 42 25  1  0  0  0  0
 42 30  1  0  0  0  0
 42 35  1  0  0  0  0
 26 43  1  6  0  0  0
 27 44  1  1  0  0  0
 45 30  2  0  0  0  0
 33 46  1  4  0  0  0
 47 34  2  0  0  0  0
 48 35  2  0  0  0  0
 49 36  2  0  0  0  0
 50 37  2  0  0  0  0
 23 51  1  6  0  0  0
 24 52  1  6  0  0  0
 25 53  1  1  0  0  0
 26 54  1  6  0  0  0
 27 55  1  6  0  0  0
 28 56  1  1  0  0  0
 29 57  1  6  0  0  0
 31 58  1  1  0  0  0
 32 59  1  6  0  0  0
M  END


  Mrv1652305152117032D          

 59 60  0  0  1  0            999 V2000
   10.0509    2.1530    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   17.1956   -0.3220    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   17.9101    0.9155    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   17.9101    4.2155    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   18.6246    5.4530    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.9088    2.9780    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   14.3377    2.9780    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   23.2612    5.3099    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   20.0535    2.1530    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   15.7667    2.9780    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   20.0535    2.9780    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.7654    1.7405    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.4798    2.1530    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.1943    1.7405    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   23.3381    6.7780    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   22.7861    7.3911    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   16.4811    0.9155    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   13.6233    1.7405    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   20.4660    6.7226    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   19.3861    5.9380    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   17.1956    0.5030    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   18.6246    4.6280    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.9088    2.1530    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   14.3377    2.1530    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   22.9256    6.0635    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   19.3390    1.7405    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   19.6410    6.7226    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   16.4811    1.7405    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   20.7209    5.9380    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   22.0324    7.0555    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   18.6246    2.1530    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   19.3390    4.2155    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   17.1956    2.1530    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   15.0522    1.7405    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   21.5056    5.6830    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   18.6246    2.9780    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   20.0535    4.6280    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   17.9101    1.7405    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   15.7667    2.1530    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   19.3390    3.3905    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   20.0535    5.4530    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   22.1187    6.2351    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   19.3390    0.9155    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   19.1561    7.3900    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   21.3179    7.4680    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   17.1956    2.9780    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   15.0522    0.9155    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   21.6771    4.8761    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   17.9101    3.3905    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   20.7680    4.2155    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   12.1943    2.5655    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
   13.6233    2.5655    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
   22.4064    5.4224    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
   19.3390    2.5655    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
   18.8262    6.5935    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
   17.1956    1.3280    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
   20.8500    5.1231    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
   18.6246    1.3280    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
   19.3390    5.0405    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
 12  1  1  0  0  0  0
 13 12  1  0  0  0  0
 14 13  1  0  0  0  0
 16 15  2  0  0  0  0
 21  2  1  0  0  0  0
 21  3  1  0  0  0  0
 21 17  2  0  0  0  0
 22  4  1  0  0  0  0
 22  5  1  0  0  0  0
 23  6  1  1  0  0  0
 23 14  1  0  0  0  0
 23 18  1  0  0  0  0
 24  7  1  1  0  0  0
 24 18  1  0  0  0  0
 25  8  1  6  0  0  0
 25 15  1  0  0  0  0
 26  9  1  0  0  0  0
 27 19  1  0  0  0  0
 27 20  1  0  0  0  0
 28 17  1  0  0  0  0
 29 19  1  0  0  0  0
 30 16  1  0  0  0  0
 31 26  1  0  0  0  0
 32 22  1  0  0  0  0
 33 28  1  0  0  0  0
 34 24  1  0  0  0  0
 29 35  1  1  0  0  0
 36 31  1  0  0  0  0
 37 32  1  0  0  0  0
 31 38  1  6  0  0  0
 38 33  2  0  0  0  0
 39 10  1  0  0  0  0
 28 39  1  1  0  0  0
 39 34  1  0  0  0  0
 40 11  1  0  0  0  0
 32 40  1  6  0  0  0
 40 36  1  0  0  0  0
 41 20  1  0  0  0  0
 41 29  1  0  0  0  0
 41 37  1  0  0  0  0
 42 25  1  0  0  0  0
 42 30  1  0  0  0  0
 42 35  1  0  0  0  0
 26 43  1  6  0  0  0
 27 44  1  1  0  0  0
 45 30  2  0  0  0  0
 33 46  1  4  0  0  0
 47 34  2  0  0  0  0
 48 35  2  0  0  0  0
 49 36  2  0  0  0  0
 50 37  2  0  0  0  0
 23 51  1  6  0  0  0
 24 52  1  6  0  0  0
 25 53  1  1  0  0  0
 26 54  1  6  0  0  0
 27 55  1  6  0  0  0
 28 56  1  1  0  0  0
 29 57  1  6  0  0  0
 31 58  1  1  0  0  0
 32 59  1  6  0  0  0
M  END
> <DATABASE_ID>
MMDBc0025335

> <DATABASE_NAME>
MIME

> <SMILES>
[H][C@@](C)(CCCC)C[C@@]([H])(C)C(=O)N(C)[C@@]([H])(C=C(C)C)C(O)=N[C@]([H])(C(=O)N(C)[C@@]([H])(C(C)C)C(=O)N1C[C@@]([H])(O)C[C@@]1([H])C(=O)N1C(=O)C=C[C@]1([H])C)[C@@]([H])(C)O

> <INCHI_IDENTIFIER>
InChI=1S/C37H61N5O8/c1-12-13-14-23(6)18-24(7)34(47)39(10)28(17-21(2)3)33(46)38-31(26(9)43)36(49)40(11)32(22(4)5)37(50)41-20-27(44)19-29(41)35(48)42-25(8)15-16-30(42)45/h15-17,22-29,31-32,43-44H,12-14,18-20H2,1-11H3,(H,38,46)/t23-,24-,25+,26-,27+,28+,29+,31+,32+/m1/s1

> <INCHI_KEY>
JYBPDZNTEAJICX-COBHXZBRSA-N

> <FORMULA>
C37H61N5O8

> <MOLECULAR_WEIGHT>
703.922

> <EXACT_MASS>
703.452013944

> <JCHEM_ACCEPTOR_COUNT>
9

> <JCHEM_ATOM_COUNT>
111

> <JCHEM_AVERAGE_POLARIZABILITY>
76.98001314411624

> <JCHEM_BIOAVAILABILITY>
0

> <JCHEM_DONOR_COUNT>
3

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
(2S)-N-[(1S,2R)-2-hydroxy-1-{[(2S)-1-[(2S,4S)-4-hydroxy-2-[(2S)-2-methyl-5-oxo-2,5-dihydro-1H-pyrrole-1-carbonyl]pyrrolidin-1-yl]-3-methyl-1-oxobutan-2-yl](methyl)carbamoyl}propyl]-4-methyl-2-[(2R,4R)-N,2,4-trimethyloctanamido]pent-3-enimidic acid

> <ALOGPS_LOGP>
3.47

> <JCHEM_LOGP>
3.2401361763333316

> <ALOGPS_LOGS>
-4.64

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
2

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
10.481241795418333

> <JCHEM_PKA_STRONGEST_ACIDIC>
4.384382578606251

> <JCHEM_PKA_STRONGEST_BASIC>
0.5030020811490827

> <JCHEM_POLAR_SURFACE_AREA>
171.35999999999999

> <JCHEM_REFRACTIVITY>
191.7763000000001

> <JCHEM_ROTATABLE_BOND_COUNT>
16

> <JCHEM_RULE_OF_FIVE>
0

> <ALOGPS_SOLUBILITY>
1.60e-02 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(2S)-N-[(1S,2R)-2-hydroxy-1-{[(2S)-1-[(2S,4S)-4-hydroxy-2-[(2S)-2-methyl-5-oxo-2H-pyrrole-1-carbonyl]pyrrolidin-1-yl]-3-methyl-1-oxobutan-2-yl](methyl)carbamoyl}propyl]-4-methyl-2-[(2R,4R)-N,2,4-trimethyloctanamido]pent-3-enimidic acid

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 15-MAY-21   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   15-MAY-21         0                                  
HETATM    1  C   UNK     0      18.762   4.019   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0      32.098  -0.601   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0      33.432   1.709   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0      33.432   7.869   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0      34.766  10.179   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0      24.096   5.559   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0      26.764   5.559   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0      43.421   9.912   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0      37.433   4.019   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0      29.431   5.559   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0      37.433   5.559   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0      20.095   3.249   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0      21.429   4.019   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0      22.763   3.249   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0      43.565  12.652   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0      42.534  13.797   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0      30.765   1.709   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0      25.430   3.249   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0      38.203  12.549   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0      36.187  11.084   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0      32.098   0.939   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0      34.766   8.639   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0      24.096   4.019   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0      26.764   4.019   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0      42.795  11.319   0.000  0.00  0.00           C+0
HETATM   26  C   UNK     0      36.100   3.249   0.000  0.00  0.00           C+0
HETATM   27  C   UNK     0      36.663  12.549   0.000  0.00  0.00           C+0
HETATM   28  C   UNK     0      30.765   3.249   0.000  0.00  0.00           C+0
HETATM   29  C   UNK     0      38.679  11.084   0.000  0.00  0.00           C+0
HETATM   30  C   UNK     0      41.127  13.170   0.000  0.00  0.00           C+0
HETATM   31  C   UNK     0      34.766   4.019   0.000  0.00  0.00           C+0
HETATM   32  C   UNK     0      36.100   7.869   0.000  0.00  0.00           C+0
HETATM   33  C   UNK     0      32.098   4.019   0.000  0.00  0.00           C+0
HETATM   34  C   UNK     0      28.097   3.249   0.000  0.00  0.00           C+0
HETATM   35  C   UNK     0      40.144  10.608   0.000  0.00  0.00           C+0
HETATM   36  C   UNK     0      34.766   5.559   0.000  0.00  0.00           C+0
HETATM   37  C   UNK     0      37.433   8.639   0.000  0.00  0.00           C+0
HETATM   38  N   UNK     0      33.432   3.249   0.000  0.00  0.00           N+0
HETATM   39  N   UNK     0      29.431   4.019   0.000  0.00  0.00           N+0
HETATM   40  N   UNK     0      36.100   6.329   0.000  0.00  0.00           N+0
HETATM   41  N   UNK     0      37.433  10.179   0.000  0.00  0.00           N+0
HETATM   42  N   UNK     0      41.288  11.639   0.000  0.00  0.00           N+0
HETATM   43  O   UNK     0      36.100   1.709   0.000  0.00  0.00           O+0
HETATM   44  O   UNK     0      35.758  13.795   0.000  0.00  0.00           O+0
HETATM   45  O   UNK     0      39.794  13.940   0.000  0.00  0.00           O+0
HETATM   46  O   UNK     0      32.098   5.559   0.000  0.00  0.00           O+0
HETATM   47  O   UNK     0      28.097   1.709   0.000  0.00  0.00           O+0
HETATM   48  O   UNK     0      40.464   9.102   0.000  0.00  0.00           O+0
HETATM   49  O   UNK     0      33.432   6.329   0.000  0.00  0.00           O+0
HETATM   50  O   UNK     0      38.767   7.869   0.000  0.00  0.00           O+0
HETATM   51  H   UNK     0      22.763   4.789   0.000  0.00  0.00           H+0
HETATM   52  H   UNK     0      25.430   4.789   0.000  0.00  0.00           H+0
HETATM   53  H   UNK     0      41.825  10.122   0.000  0.00  0.00           H+0
HETATM   54  H   UNK     0      36.100   4.789   0.000  0.00  0.00           H+0
HETATM   55  H   UNK     0      35.142  12.308   0.000  0.00  0.00           H+0
HETATM   56  H   UNK     0      32.098   2.479   0.000  0.00  0.00           H+0
HETATM   57  H   UNK     0      38.920   9.563   0.000  0.00  0.00           H+0
HETATM   58  H   UNK     0      34.766   2.479   0.000  0.00  0.00           H+0
HETATM   59  H   UNK     0      36.100   9.409   0.000  0.00  0.00           H+0
CONECT    1   12                                                            
CONECT    2   21                                                            
CONECT    3   21                                                            
CONECT    4   22                                                            
CONECT    5   22                                                            
CONECT    6   23                                                            
CONECT    7   24                                                            
CONECT    8   25                                                            
CONECT    9   26                                                            
CONECT   10   39                                                            
CONECT   11   40                                                            
CONECT   12    1   13                                                       
CONECT   13   12   14                                                       
CONECT   14   13   23                                                       
CONECT   15   16   25                                                       
CONECT   16   15   30                                                       
CONECT   17   21   28                                                       
CONECT   18   23   24                                                       
CONECT   19   27   29                                                       
CONECT   20   27   41                                                       
CONECT   21    2    3   17                                                  
CONECT   22    4    5   32                                                  
CONECT   23    6   14   18   51                                             
CONECT   24    7   18   34   52                                             
CONECT   25    8   15   42   53                                             
CONECT   26    9   31   43   54                                             
CONECT   27   19   20   44   55                                             
CONECT   28   17   33   39   56                                             
CONECT   29   19   35   41   57                                             
CONECT   30   16   42   45                                                  
CONECT   31   26   36   38   58                                             
CONECT   32   22   37   40   59                                             
CONECT   33   28   38   46                                                  
CONECT   34   24   39   47                                                  
CONECT   35   29   42   48                                                  
CONECT   36   31   40   49                                                  
CONECT   37   32   41   50                                                  
CONECT   38   31   33                                                       
CONECT   39   10   28   34                                                  
CONECT   40   11   32   36                                                  
CONECT   41   20   29   37                                                  
CONECT   42   25   30   35                                                  
CONECT   43   26                                                            
CONECT   44   27                                                            
CONECT   45   30                                                            
CONECT   46   33                                                            
CONECT   47   34                                                            
CONECT   48   35                                                            
CONECT   49   36                                                            
CONECT   50   37                                                            
CONECT   51   23                                                            
CONECT   52   24                                                            
CONECT   53   25                                                            
CONECT   54   26                                                            
CONECT   55   27                                                            
CONECT   56   28                                                            
CONECT   57   29                                                            
CONECT   58   31                                                            
CONECT   59   32                                                            
MASTER        0    0    0    0    0    0    0    0   59    0  120    0
END

Synonyms

Not Available

Molecular Formula

C₃₇H₆₁N₅O₈

Average Mass

703.922

Monoisotopic Mass

703.452013944

IUPAC Name

(2S)-N-[(1S,2R)-2-hydroxy-1-{[(2S)-1-[(2S,4S)-4-hydroxy-2-[(2S)-2-methyl-5-oxo-2,5-dihydro-1H-pyrrole-1-carbonyl]pyrrolidin-1-yl]-3-methyl-1-oxobutan-2-yl](methyl)carbamoyl}propyl]-4-methyl-2-[(2R,4R)-N,2,4-trimethyloctanamido]pent-3-enimidic acid

Traditional Name

(2S)-N-[(1S,2R)-2-hydroxy-1-{[(2S)-1-[(2S,4S)-4-hydroxy-2-[(2S)-2-methyl-5-oxo-2H-pyrrole-1-carbonyl]pyrrolidin-1-yl]-3-methyl-1-oxobutan-2-yl](methyl)carbamoyl}propyl]-4-methyl-2-[(2R,4R)-N,2,4-trimethyloctanamido]pent-3-enimidic acid

CAS Registry Number

Not Available

SMILES

[H][C@@](C)(CCCC)C[C@@]([H])(C)C(=O)N(C)[C@@]([H])(C=C(C)C)C(O)=N[C@]([H])(C(=O)N(C)[C@@]([H])(C(C)C)C(=O)N1C[C@@]([H])(O)C[C@@]1([H])C(=O)N1C(=O)C=C[C@]1([H])C)[C@@]([H])(C)O

InChI Identifier

InChI=1S/C37H61N5O8/c1-12-13-14-23(6)18-24(7)34(47)39(10)28(17-21(2)3)33(46)38-31(26(9)43)36(49)40(11)32(22(4)5)37(50)41-20-27(44)19-29(41)35(48)42-25(8)15-16-30(42)45/h15-17,22-29,31-32,43-44H,12-14,18-20H2,1-11H3,(H,38,46)/t23-,24-,25+,26-,27+,28+,29+,31+,32+/m1/s1

InChI Key

JYBPDZNTEAJICX-COBHXZBRSA-N

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as hybrid peptides. Hybrid peptides are compounds containing at least two different types of amino acids (alpha, beta, gamma, delta) linked to each other through a peptide bond.

Kingdom

Organic compounds

Super Class

Organic acids and derivatives

Class

Peptidomimetics

Sub Class

Hybrid peptides

Direct Parent

Hybrid peptides

Alternative Parents

Substituents

Hybrid peptide
Valine or derivatives
N-acyl-alpha amino acid or derivatives
Alpha-amino acid amide
Alpha-amino acid or derivatives
Pyrrolidine-2-carboxamide
Pyrrolidine carboxylic acid or derivatives
N-acylpyrrolidine
Carboxylic acid imide, n-substituted
N-acyl-amine
Tertiary carboxylic acid amide
Pyrroline
Pyrrolidine
Dicarboximide
Carboxylic acid imide
Secondary alcohol
Carboxamide group
Azacycle
Organoheterocyclic compound
Organic 1,3-dipolar compound
Propargyl-type 1,3-dipolar organic compound
Carboxylic acid derivative
Carboximidic acid derivative
Carboximidic acid
Organic nitrogen compound
Organic oxygen compound
Organopnictogen compound
Organic oxide
Hydrocarbon derivative
Organooxygen compound
Organonitrogen compound
Carbonyl group
Alcohol
Aliphatic heteromonocyclic compound

Molecular Framework

Aliphatic heteromonocyclic compounds

External Descriptors

Not Available

Functional Ontology

Not Available

Physical Properties

State

Expected Solid

Predicted Properties

Property	Value	Source
Water Solubility	0.016 g/L	ALOGPS
logP	3.47	ALOGPS
logP	3.24	ChemAxon
logS	-4.6	ALOGPS
pKa (Strongest Acidic)	4.38	ChemAxon
pKa (Strongest Basic)	0.5	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	9	ChemAxon
Hydrogen Donor Count	3	ChemAxon
Polar Surface Area	171.36 Å²	ChemAxon
Rotatable Bond Count	16	ChemAxon
Refractivity	191.78 m³·mol⁻¹	ChemAxon
Polarizability	76.98 Å³	ChemAxon
Number of Rings	2	ChemAxon
Bioavailability	No	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

Spectra

Spectrum Type	Description	Splash Key	Deposition Date	View
Predicted GC-MS	Predicted GC-MS Spectrum - GC-MS (TMS_2_3) - 70eV, Positive	Not Available	2022-08-08	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 10V, Positive	Not Available	2022-08-10	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 20V, Positive	Not Available	2022-08-10	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 40V, Positive	Not Available	2022-08-10	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 10V, Negative	Not Available	2022-08-10	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 20V, Negative	Not Available	2022-08-10	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 40V, Negative	Not Available	2022-08-10	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 100 MHz, H₂O, predicted)		2022-08-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)		2022-08-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 1000 MHz, H₂O, predicted)		2022-08-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)		2022-08-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 200 MHz, H₂O, predicted)		2022-08-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)		2022-08-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 300 MHz, H₂O, predicted)		2022-08-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)		2022-08-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 400 MHz, H₂O, predicted)		2022-08-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)		2022-08-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 500 MHz, H₂O, predicted)		2022-08-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)		2022-08-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 600 MHz, H₂O, predicted)		2022-08-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)		2022-08-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 700 MHz, H₂O, predicted)		2022-08-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)		2022-08-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 800 MHz, H₂O, predicted)		2022-08-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)		2022-08-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 900 MHz, H₂O, predicted)		2022-08-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)		2022-08-20	View Spectrum

Biological Properties

Cellular Locations

Not Available

Biospecimen Locations

Not Available

Tissue Locations

Not Available

Associated OMIM IDs

114500 (Colorectal cancer)
610247 (Eosinophilic esophagitis)

Human Proteins and Enzymes

Protein ID	Protein Name	Protein Type	Uniprot ID	Species

Human Pathways

Pathways

Name	SMPDB/PathBank

Metabolic Reactions

Not Available

Health Effects and Bioactivity

Health Outcome/Bioactivity	Metabolite Response/Effect	Evidence Type	Host and Biospecimen	Data Source	Reference

Microbial Sources

Superkingdom/Kingdom	Phylum	Total species	Hosts and Body Sites	Microbial Links
Bacteria	Cyanobacteria	1	Human feces	Metabolic reconstruction

Exposure Sources

Source Type	Source Sub-type	Species	Data Source	Reference

Host Biospecimen and Location

Host and Biospecimen	Status	Mean	Std	Min	Max	Units	Age	Sex	Health Condition	Data Source	Reference

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FooDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

81163319

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

139291920

PDB ID

Not Available

ChEBI ID

Not Available

Food Biomarker Ontology

Not Available

References

Synthesis Reference

Not Available

General References

van Santen JA, Poynton EF, Iskakova D, McMann E, Alsup TA, Clark TN, Fergusson CH, Fewer DP, Hughes AH, McCadden CA, Parra J, Soldatou S, Rudolf JD, Janssen EM, Duncan KR, Linington RG: The Natural Products Atlas 2.0: a database of microbially-derived natural products. Nucleic Acids Res. 2022 Jan 7;50(D1):D1317-D1323. doi: 10.1093/nar/gkab941. [PubMed:34718710 ]

Showing metabocard for Microcolin G (MMDBc0025335)

MOL for #<Metabolite:0x00007fed156eaa50>

3D MOL for #<Metabolite:0x00007fed156eaa50>

3D SDF for #<Metabolite:0x00007fed156eaa50>

3D-SDF for #<Metabolite:0x00007fed156eaa50>

PDB for #<Metabolite:0x00007fed156eaa50>

3D PDB for #<Metabolite:0x00007fed156eaa50>

SMILES for #<Metabolite:0x00007fed156eaa50>

INCHI for #<Metabolite:0x00007fed156eaa50>

Structure for #<Metabolite:0x00007fed156eaa50>

3D Structure for #<Metabolite:0x00007fed156eaa50>