| MMDBm0098956 | Zygosaccharomyces rouxii | Fungi | Ascomycota | Not Available | Not Available | RHEA |
| MMDBm0097490 | Ogataea angusta | Fungi | Ascomycota | Not Available | Not Available | RHEA |
| MMDBm0095324 | Candida albicans SC5314 | Fungi | Ascomycota | Not Available | Not Available | RHEA |
| MMDBm0029026 | Aspergillus fumigatus Af293 | Fungi | Ascomycota | Not Available | Not Available | RHEA |
| MMDBm0101577 | Schizosaccharomyces pombe 972h- | Fungi | Ascomycota | Not Available | Not Available | RHEA |
| MMDBm0029062 | Aspergillus nidulans FGSC A4 | Fungi | Ascomycota | Not Available | Not Available | RHEA |
| MMDBm0028950 | Aspergillus niger | Fungi | Ascomycota | Human Feces | Not Available | RHEA |
| MMDBm0096592 | Yarrowia lipolytica CLIB122 | Fungi | Ascomycota | Not Available | Not Available | RHEA |
| MMDBm0159119 | Encephalitozoon cuniculi GB-M1 | Fungi | Microsporidia | Not Available | Not Available | RHEA |
| MMDBm0098378 | Saccharomyces cerevisiae S288C | Fungi | Ascomycota | Not Available | Not Available | RHEA |
| MMDBm0098142 | Kluyveromyces lactis NRRL Y-1140 | Fungi | Ascomycota | Not Available | Not Available | RHEA |
| MMDBm0050478 | Botrytis cinerea B05.10 | Fungi | Ascomycota | Not Available | Not Available | RHEA |
| MMDBm0882065 | Thermoproteus tenax Kra 1 | Archaea | Not Available | Not Available | Not Available | RHEA |
| MMDBm0002701 | Thermoplasma acidophilum DSM 1728 | Archaea | Euryarchaeota | Not Available | Not Available | RHEA |
| MMDBm0610810 | Vibrio fluvialis PG41 | Bacteria | Proteobacteria | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0761370 | Geobacillus vulcani PSS1 | Bacteria | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0002607 | Streptococcus gordonii str. Challis substr. CH1 | Bacteria | Firmicutes | Human | Metabolic reconstruction | VMH |
| MMDBm0787536 | Enterococcus phoeniculicola ATCC BAA-412 | Bacteria | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0000636 | Pseudomonas savastanoi | Bacteria | Proteobacteria | Not Available | Not Available | RHEA |
| MMDBm0471855 | Sphingomonas paucimobilis | Bacteria | Proteobacteria | Human | Metabolic reconstruction | VMH |
| MMDBm0435884 | Methylobacterium mesophilicum SR1.6/6 | Bacteria | Proteobacteria | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0483496 | Burkholderia cepacia GG4 | Bacteria | Proteobacteria | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0000064 | Bifidobacterium adolescentis ATCC 15703 | Bacteria | Actinobacteria | Human | Metabolic reconstruction | VMH |
| MMDBm0001040 | Bifidobacterium breve | Bacteria | Actinobacteria | Human | Metabolic reconstruction | VMH |
| MMDBm0002594 | Streptococcus thermophilus LMG 18311 | Bacteria | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
