Showing metabocard for Galactosyl-glucosyl2-heptosyl3-KDO2-lipid A-bisphosphate (MMDBc0030174)
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Version | 1.0 | |||||||||||||||||||||||||||||||||||||||||||||||||||
Status | Detected and Quantified | |||||||||||||||||||||||||||||||||||||||||||||||||||
Creation Date | 2021-11-17 23:56:55 UTC | |||||||||||||||||||||||||||||||||||||||||||||||||||
Update Date | 2022-08-31 17:40:25 UTC | |||||||||||||||||||||||||||||||||||||||||||||||||||
Metabolite ID | MMDBc0030174 | |||||||||||||||||||||||||||||||||||||||||||||||||||
Metabolite Identification | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Common Name | Galactosyl-glucosyl2-heptosyl3-KDO2-lipid A-bisphosphate | |||||||||||||||||||||||||||||||||||||||||||||||||||
Description | Galactosyl-glucosyl2-heptosyl3-kdo2-lipid a-bisphosphate is a component of LPS. Bacterial lipopolysaccharides (LPS) typically consist of a hydrophobic domain inserted into the outer membrane known as lipid A (or endotoxin), a phosphorylated "core" oligosaccharide and a distal polysaccharide (or O antigen). The core oligosaccharides are conceptually divided into two regions: inner core and outer core. The inner core is highly conserved, comprises three deoxy-D-manno-octulosonic acid (KDO) and L-glycero-D-manno-heptose (Hep) and is often phosphorylated. The inner core oligosaccharide plays a critical role in essential barrier function of the outer membrane. The outer core comprises a tri-hexose backbone modified with varying side-branch substitutions of hexose and acetamidohexose residues. The outer core provides an attachment site for O-antigen. The completed lipid A-KDO2 serves as the acceptor on which the core oligosaccharide chains are assembled by sequential glycosyl transfer from nucleotide sugar precursors. This process involves a co-ordinated complex of membrane-associated glycosyltransferases acting at the cytoplasmic face of the plasma membrane. | |||||||||||||||||||||||||||||||||||||||||||||||||||
Structure | MOL for #<Metabolite:0x00007fdb4846fae8>Mrv0541 05301214582D 288297 0 0 0 0 999 V2000 -5.2572 18.9491 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -13.8377 33.0183 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -11.3207 21.1288 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -9.6046 29.6496 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 3.6666 18.9491 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -8.5750 20.3362 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -5.8292 19.5435 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -13.0368 33.2165 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -11.0919 21.9214 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -9.0326 29.0551 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 3.0945 19.5435 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -8.3461 21.1288 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -5.6004 20.3362 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -12.4648 32.6220 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -10.2911 22.1196 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -8.2317 29.2533 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 3.3234 20.3362 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -7.5453 21.3270 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -4.7995 20.5343 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -11.6639 32.8202 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -10.0622 22.9122 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -7.6597 28.6588 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 2.7513 20.9306 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -7.3165 22.1196 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -4.5707 21.3270 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -11.0919 32.2257 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -9.2614 23.1104 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -6.8589 28.8570 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 2.9801 21.7233 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -6.5156 22.3178 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -3.7699 21.5251 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -10.2911 32.4238 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -9.0326 23.9030 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -6.2868 28.2625 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 2.4081 22.3178 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -6.2868 23.1104 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -3.5411 22.3178 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -2.7402 22.5159 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -9.7190 31.8294 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -8.2317 24.1012 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -5.1425 28.3933 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 2.6369 23.1104 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -5.4860 23.3085 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -2.5114 23.3085 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -8.9182 32.0275 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -8.0029 24.8938 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -4.5705 27.7988 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 2.0649 23.7049 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -5.2572 24.1012 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -1.7105 23.5067 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -8.3461 31.4330 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -7.2021 25.0920 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -3.7696 27.9970 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 2.2937 24.4975 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -4.4563 24.2993 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -1.4817 24.2993 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -7.5453 31.6312 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -6.9733 25.8846 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -3.5411 27.4699 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 1.7217 25.0920 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -4.2275 25.0920 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -0.6809 24.4975 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -6.9733 31.0367 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -6.1724 26.0828 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -2.7402 27.6680 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 1.9505 25.8846 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -3.4266 25.2901 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -0.4521 25.2901 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -5.6004 30.6404 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -5.1428 27.0736 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -1.3673 27.2717 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 1.6073 27.2717 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 4.1640 30.5806 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 2.3481 32.0609 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 3.3203 33.2767 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 1.2170 30.1772 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 4.5707 30.9719 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 1.0157 34.6814 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 8.8476 31.2633 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 12.2154 34.3870 0.0000 C 0 0 0 0 0 0 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286143 1 0 0 0 0 287144 1 0 0 0 0 288145 1 0 0 0 0 M CHG 2 231 1 232 1 M END > <DATABASE_ID> MMDBc0030174 > <DATABASE_NAME> MIME > <SMILES> [H][C@@](O)(CCCCCCCCCCC)CC(=O)O[C@@]1([H])[C@]([H])(O)[C@@]([H])(CO[C@]2([H])O[C@]([H])(CO[C@@]3(C[C@@]([H])(OC4(CC([H])(O)C([H])(O)C([H])(O4)C([H])(O)CO)C(O)O)[C@@]([H])(OC4([H])OC([H])(C([H])(O)CO)[C@@]([H])(O[P+](O)(O)O)[C@]([H])(OC5([H])OC([H])([C@@]([H])(O)COC6([H])OC([H])(C([H])(O)CO)C([H])(O)C([H])(O)C6([H])O)[C@@]([H])(O[P+](O)(O)O)[C@]([H])(OC6([H])OC([H])(COC7([H])OC([H])(CO)C([H])(O)C([H])(O)C7([H])O)C([H])(O)C([H])(OC7([H])OC([H])(CO)C([H])(O)C([H])(O)C7([H])O)C6([H])O)[C@]5([H])O)[C@]4([H])O)[C@]([H])(O3)[C@]([H])(O)CO)C(O)=O)[C@@]([H])(OP(O)(O)=O)[C@]([H])(OC(=O)C[C@@]([H])(CCCCCCCCCCC)OC(=O)CCCCCCCCCCCCC)[C@@]2([H])N=C(O)C[C@@]([H])(CCCCCCCCCCC)OC(=O)CCCCCCCCCCC)O[C@]([H])(OP(O)(O)=O)[C@]1([H])N=C(O)C[C@]([H])(O)CCCCCCCCCCC > <INCHI_IDENTIFIER> InChI=1S/C149H272N2O78P4/c1-7-13-19-25-31-37-38-44-50-56-62-68-104(169)208-88(66-60-54-48-42-35-29-23-17-11-5)72-106(171)215-132-108(151-102(167)71-87(65-59-53-47-41-34-28-22-16-10-4)207-103(168)67-61-55-49-43-36-30-24-18-12-6)138(204-82-98-112(175)131(214-105(170)70-86(159)64-58-52-46-40-33-27-21-15-9-3)107(139(211-98)229-233(200,201)202)150-101(166)69-85(158)63-57-51-45-39-32-26-20-14-8-2)213-100(130(132)226-230(191,192)193)84-206-148(146(187)188)74-95(223-149(147(189)190)73-89(160)109(172)125(224-149)91(162)76-153)129(128(225-148)93(164)78-155)219-144-122(185)134(136(227-231(194,195)196)126(217-144)92(163)77-154)222-145-123(186)135(137(228-232(197,198)199)127(218-145)94(165)81-203-141-119(182)116(179)117(180)124(216-141)90(161)75-152)221-143-121(184)133(220-142-120(183)115(178)111(174)97(80-157)210-142)113(176)99(212-143)83-205-140-118(181)114(177)110(173)96(79-156)209-140/h85-100,107-145,147,152-165,172-186,189-190,194-199H,7-84H2,1-6H3,(H5-2,150,151,166,167,187,188,191,192,193,200,201,202)/p+2/t85-,86-,87-,88-,89?,90?,91?,92?,93-,94+,95-,96?,97?,98-,99?,100-,107-,108-,109?,110?,111?,112-,113?,114?,115?,116?,117?,118?,119?,120?,121?,122+,123+,124?,125?,126?,127?,128-,129-,130-,131-,132-,133?,134-,135-,136-,137-,138-,139-,140?,141?,142?,143?,144?,145?,148-,149?/m1/s1 > <INCHI_KEY> FFWQRZVPZLTLGX-LCELMEHOSA-P > <FORMULA> C149H274N2O78P4 > <MOLECULAR_WEIGHT> 3465.6315 > <EXACT_MASS> 3463.648593342 > <JCHEM_ACCEPTOR_COUNT> 74 > <JCHEM_AVERAGE_POLARIZABILITY> 365.706158173331 > <JCHEM_BIOAVAILABILITY> 0 > <JCHEM_DONOR_COUNT> 44 > <JCHEM_FORMAL_CHARGE> 2 > <JCHEM_GHOSE_FILTER> 0 > <JCHEM_IUPAC> {[(3R,4R,5S)-6-{[(2R,3R,4R,6R)-6-carboxy-4-{[6-(1,2-dihydroxyethyl)-2-(dihydroxymethyl)-4,5-dihydroxyoxan-2-yl]oxy}-2-[(1R)-1,2-dihydroxyethyl]-6-{[(2R,3S,4R,5R,6R)-6-{[(2R,3S,4R,5R,6R)-5-{[(3R)-1,3-dihydroxytetradecylidene]amino}-3-hydroxy-4-{[(3R)-3-hydroxytetradecanoyl]oxy}-6-(phosphonooxy)oxan-2-yl]methoxy}-5-{[(3R)-3-(dodecanoyloxy)-1-hydroxytetradecylidene]amino}-3-(phosphonooxy)-4-{[(3R)-3-(tetradecanoyloxy)tetradecanoyl]oxy}oxan-2-yl]methoxy}oxan-3-yl]oxy}-4-{[(3S,4R,5R)-4-[(3,5-dihydroxy-4-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-6-({[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}methyl)oxan-2-yl)oxy]-6-[(1S)-2-{[6-(1,2-dihydroxyethyl)-3,4,5-trihydroxyoxan-2-yl]oxy}-1-hydroxyethyl]-3-hydroxy-5-[(trihydroxyphosphaniumyl)oxy]oxan-2-yl]oxy}-2-(1,2-dihydroxyethyl)-5-hydroxyoxan-3-yl]oxy}trihydroxyphosphanium > <JCHEM_LOGP> 8.180529863 > <JCHEM_MDDR_LIKE_RULE> 1 > <JCHEM_NUMBER_OF_RINGS> 10 > <JCHEM_PHYSIOLOGICAL_CHARGE> -2 > <JCHEM_PKA> 1.196358437823378 > <JCHEM_PKA_STRONGEST_ACIDIC> 0.548238840898053 > <JCHEM_PKA_STRONGEST_BASIC> -4.6696114259338275 > <JCHEM_POLAR_SURFACE_AREA> 1283.540000000001 > <JCHEM_REFRACTIVITY> 802.0808000000027 > <JCHEM_ROTATABLE_BOND_COUNT> 123 > <JCHEM_RULE_OF_FIVE> 0 > <JCHEM_TRADITIONAL_IUPAC> {[(3R,4R,5S)-6-{[(2R,3R,4R,6R)-6-carboxy-4-{[6-(1,2-dihydroxyethyl)-2-(dihydroxymethyl)-4,5-dihydroxyoxan-2-yl]oxy}-2-[(1R)-1,2-dihydroxyethyl]-6-{[(2R,3S,4R,5R,6R)-6-{[(2R,3S,4R,5R,6R)-5-{[(3R)-1,3-dihydroxytetradecylidene]amino}-3-hydroxy-4-{[(3R)-3-hydroxytetradecanoyl]oxy}-6-(phosphonooxy)oxan-2-yl]methoxy}-5-{[(3R)-3-(dodecanoyloxy)-1-hydroxytetradecylidene]amino}-3-(phosphonooxy)-4-{[(3R)-3-(tetradecanoyloxy)tetradecanoyl]oxy}oxan-2-yl]methoxy}oxan-3-yl]oxy}-4-{[(3S,4R,5R)-4-[(3,5-dihydroxy-4-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-6-({[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}methyl)oxan-2-yl)oxy]-6-[(1S)-2-{[6-(1,2-dihydroxyethyl)-3,4,5-trihydroxyoxan-2-yl]oxy}-1-hydroxyethyl]-3-hydroxy-5-[(trihydroxyphosphaniumyl)oxy]oxan-2-yl]oxy}-2-(1,2-dihydroxyethyl)-5-hydroxyoxan-3-yl]oxy}trihydroxyphosphanium > <JCHEM_VEBER_RULE> 0 $$$$ PDB for #<Metabolite:0x00007fdb4846fae8>HEADER PROTEIN 30-MAY-12 NONE TITLE NULL COMPND NULL SOURCE NULL KEYWDS NULL EXPDTA NULL AUTHOR Marvin REVDAT 1 30-MAY-12 0 HETATM 1 C UNK 0 0.000 0.000 0.000 0.00 0.00 C+0 HETATM 2 C UNK 0 0.000 0.000 0.000 0.00 0.00 C+0 HETATM 3 C UNK 0 0.000 0.000 0.000 0.00 0.00 C+0 HETATM 4 C UNK 0 0.000 0.000 0.000 0.00 0.00 C+0 HETATM 5 C UNK 0 0.000 0.000 0.000 0.00 0.00 C+0 HETATM 6 C UNK 0 0.000 0.000 0.000 0.00 0.00 C+0 HETATM 7 C UNK 0 0.000 0.000 0.000 0.00 0.00 C+0 HETATM 8 C UNK 0 0.000 0.000 0.000 0.00 0.00 C+0 HETATM 9 C UNK 0 0.000 0.000 0.000 0.00 0.00 C+0 HETATM 10 C UNK 0 0.000 0.000 0.000 0.00 0.00 C+0 HETATM 11 C UNK 0 0.000 0.000 0.000 0.00 0.00 C+0 HETATM 12 C UNK 0 0.000 0.000 0.000 0.00 0.00 C+0 HETATM 13 C UNK 0 0.000 0.000 0.000 0.00 0.00 C+0 HETATM 14 C UNK 0 0.000 0.000 0.000 0.00 0.00 C+0 HETATM 15 C UNK 0 0.000 0.000 0.000 0.00 0.00 C+0 HETATM 16 C UNK 0 0.000 0.000 0.000 0.00 0.00 C+0 HETATM 17 C UNK 0 0.000 0.000 0.000 0.00 0.00 C+0 HETATM 18 C UNK 0 0.000 0.000 0.000 0.00 0.00 C+0 HETATM 19 C UNK 0 0.000 0.000 0.000 0.00 0.00 C+0 HETATM 20 C UNK 0 0.000 0.000 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0.00 H+0 HETATM 238 H UNK 0 0.000 0.000 0.000 0.00 0.00 H+0 HETATM 239 H UNK 0 0.000 0.000 0.000 0.00 0.00 H+0 HETATM 240 H UNK 0 0.000 0.000 0.000 0.00 0.00 H+0 HETATM 241 H UNK 0 0.000 0.000 0.000 0.00 0.00 H+0 HETATM 242 H UNK 0 0.000 0.000 0.000 0.00 0.00 H+0 HETATM 243 H UNK 0 0.000 0.000 0.000 0.00 0.00 H+0 HETATM 244 H UNK 0 0.000 0.000 0.000 0.00 0.00 H+0 HETATM 245 H UNK 0 0.000 0.000 0.000 0.00 0.00 H+0 HETATM 246 H UNK 0 0.000 0.000 0.000 0.00 0.00 H+0 HETATM 247 H UNK 0 0.000 0.000 0.000 0.00 0.00 H+0 HETATM 248 H UNK 0 0.000 0.000 0.000 0.00 0.00 H+0 HETATM 249 H UNK 0 0.000 0.000 0.000 0.00 0.00 H+0 HETATM 250 H UNK 0 0.000 0.000 0.000 0.00 0.00 H+0 HETATM 251 H UNK 0 0.000 0.000 0.000 0.00 0.00 H+0 HETATM 252 H UNK 0 0.000 0.000 0.000 0.00 0.00 H+0 HETATM 253 H UNK 0 0.000 0.000 0.000 0.00 0.00 H+0 HETATM 254 H UNK 0 0.000 0.000 0.000 0.00 0.00 H+0 HETATM 255 H UNK 0 0.000 0.000 0.000 0.00 0.00 H+0 HETATM 256 H UNK 0 0.000 0.000 0.000 0.00 0.00 H+0 HETATM 257 H UNK 0 0.000 0.000 0.000 0.00 0.00 H+0 HETATM 258 H UNK 0 0.000 0.000 0.000 0.00 0.00 H+0 HETATM 259 H UNK 0 0.000 0.000 0.000 0.00 0.00 H+0 HETATM 260 H UNK 0 0.000 0.000 0.000 0.00 0.00 H+0 HETATM 261 H UNK 0 0.000 0.000 0.000 0.00 0.00 H+0 HETATM 262 H UNK 0 0.000 0.000 0.000 0.00 0.00 H+0 HETATM 263 H UNK 0 0.000 0.000 0.000 0.00 0.00 H+0 HETATM 264 H UNK 0 0.000 0.000 0.000 0.00 0.00 H+0 HETATM 265 H UNK 0 0.000 0.000 0.000 0.00 0.00 H+0 HETATM 266 H UNK 0 0.000 0.000 0.000 0.00 0.00 H+0 HETATM 267 H UNK 0 0.000 0.000 0.000 0.00 0.00 H+0 HETATM 268 H UNK 0 0.000 0.000 0.000 0.00 0.00 H+0 HETATM 269 H UNK 0 0.000 0.000 0.000 0.00 0.00 H+0 HETATM 270 H UNK 0 0.000 0.000 0.000 0.00 0.00 H+0 HETATM 271 H UNK 0 0.000 0.000 0.000 0.00 0.00 H+0 HETATM 272 H UNK 0 0.000 0.000 0.000 0.00 0.00 H+0 HETATM 273 H UNK 0 0.000 0.000 0.000 0.00 0.00 H+0 HETATM 274 H UNK 0 0.000 0.000 0.000 0.00 0.00 H+0 HETATM 275 H UNK 0 0.000 0.000 0.000 0.00 0.00 H+0 HETATM 276 H UNK 0 0.000 0.000 0.000 0.00 0.00 H+0 HETATM 277 H UNK 0 0.000 0.000 0.000 0.00 0.00 H+0 HETATM 278 H UNK 0 0.000 0.000 0.000 0.00 0.00 H+0 HETATM 279 H UNK 0 0.000 0.000 0.000 0.00 0.00 H+0 HETATM 280 H UNK 0 0.000 0.000 0.000 0.00 0.00 H+0 HETATM 281 H UNK 0 0.000 0.000 0.000 0.00 0.00 H+0 HETATM 282 H UNK 0 0.000 0.000 0.000 0.00 0.00 H+0 HETATM 283 H UNK 0 0.000 0.000 0.000 0.00 0.00 H+0 HETATM 284 H UNK 0 0.000 0.000 0.000 0.00 0.00 H+0 HETATM 285 H UNK 0 0.000 0.000 0.000 0.00 0.00 H+0 HETATM 286 H UNK 0 0.000 0.000 0.000 0.00 0.00 H+0 HETATM 287 H UNK 0 0.000 0.000 0.000 0.00 0.00 H+0 HETATM 288 H UNK 0 0.000 0.000 0.000 0.00 0.00 H+0 CONECT 1 7 CONECT 2 8 CONECT 3 9 CONECT 4 10 CONECT 5 11 CONECT 6 12 CONECT 7 1 13 CONECT 8 2 14 CONECT 9 3 15 CONECT 10 4 16 CONECT 11 5 17 CONECT 12 6 18 CONECT 13 7 19 CONECT 14 8 20 CONECT 15 9 21 CONECT 16 10 22 CONECT 17 11 23 CONECT 18 12 24 CONECT 19 13 25 CONECT 20 14 26 CONECT 21 15 27 CONECT 22 16 28 CONECT 23 17 29 CONECT 24 18 30 CONECT 25 19 31 CONECT 26 20 32 CONECT 27 21 33 CONECT 28 22 34 CONECT 29 23 35 CONECT 30 24 36 CONECT 31 25 37 CONECT 32 26 39 CONECT 33 27 40 CONECT 34 28 41 CONECT 35 29 42 CONECT 36 30 43 CONECT 37 31 38 CONECT 38 37 44 CONECT 39 32 45 CONECT 40 33 46 CONECT 41 34 47 CONECT 42 35 48 CONECT 43 36 49 CONECT 44 38 50 CONECT 45 39 51 CONECT 46 40 52 CONECT 47 41 53 CONECT 48 42 54 CONECT 49 43 55 CONECT 50 44 56 CONECT 51 45 57 CONECT 52 46 58 CONECT 53 47 59 CONECT 54 48 60 CONECT 55 49 61 CONECT 56 50 62 CONECT 57 51 63 CONECT 58 52 64 CONECT 59 53 65 CONECT 60 54 66 CONECT 61 55 67 CONECT 62 56 68 CONECT 63 57 85 CONECT 64 58 86 CONECT 65 59 87 CONECT 66 60 88 CONECT 67 61 103 CONECT 68 62 104 CONECT 69 85 101 CONECT 70 86 105 CONECT 71 87 102 CONECT 72 88 106 CONECT 73 89 149 CONECT 74 95 148 CONECT 75 90 152 CONECT 76 91 153 CONECT 77 92 154 CONECT 78 93 155 CONECT 79 96 156 CONECT 80 97 157 CONECT 81 94 203 CONECT 82 98 204 CONECT 83 99 205 CONECT 84 100 206 CONECT 85 63 69 158 234 CONECT 86 64 70 159 235 CONECT 87 65 71 207 236 CONECT 88 66 72 208 237 CONECT 89 73 109 160 238 CONECT 90 75 124 161 239 CONECT 91 76 125 162 240 CONECT 92 77 126 163 241 CONECT 93 78 128 164 242 CONECT 94 81 127 165 243 CONECT 95 74 129 223 244 CONECT 96 79 110 209 245 CONECT 97 80 111 210 246 CONECT 98 82 112 211 247 CONECT 99 83 113 212 248 CONECT 100 84 130 213 249 CONECT 101 69 150 166 CONECT 102 71 151 167 CONECT 103 67 168 207 CONECT 104 68 169 208 CONECT 105 70 170 214 CONECT 106 72 171 215 CONECT 107 131 139 150 250 CONECT 108 132 138 151 251 CONECT 109 89 125 172 252 CONECT 110 96 114 173 253 CONECT 111 97 115 174 254 CONECT 112 98 131 175 255 CONECT 113 99 133 176 256 CONECT 114 110 118 177 257 CONECT 115 111 120 178 258 CONECT 116 117 119 179 259 CONECT 117 116 124 180 260 CONECT 118 114 140 181 261 CONECT 119 116 141 182 262 CONECT 120 115 142 183 263 CONECT 121 133 143 184 264 CONECT 122 134 144 185 265 CONECT 123 135 145 186 266 CONECT 124 90 117 216 267 CONECT 125 91 109 224 268 CONECT 126 92 136 217 269 CONECT 127 94 137 218 270 CONECT 128 93 129 225 271 CONECT 129 95 128 219 272 CONECT 130 100 132 226 273 CONECT 131 107 112 214 274 CONECT 132 108 130 215 275 CONECT 133 113 121 220 276 CONECT 134 122 136 222 277 CONECT 135 123 137 221 278 CONECT 136 126 134 227 279 CONECT 137 127 135 228 280 CONECT 138 108 204 213 281 CONECT 139 107 211 229 282 CONECT 140 118 205 209 283 CONECT 141 119 203 216 284 CONECT 142 120 210 220 285 CONECT 143 121 212 221 286 CONECT 144 122 217 219 287 CONECT 145 123 218 222 288 CONECT 146 148 187 188 CONECT 147 149 189 190 CONECT 148 74 146 206 225 CONECT 149 73 147 223 224 CONECT 150 101 107 CONECT 151 102 108 CONECT 152 75 CONECT 153 76 CONECT 154 77 CONECT 155 78 CONECT 156 79 CONECT 157 80 CONECT 158 85 CONECT 159 86 CONECT 160 89 CONECT 161 90 CONECT 162 91 CONECT 163 92 CONECT 164 93 CONECT 165 94 CONECT 166 101 CONECT 167 102 CONECT 168 103 CONECT 169 104 CONECT 170 105 CONECT 171 106 CONECT 172 109 CONECT 173 110 CONECT 174 111 CONECT 175 112 CONECT 176 113 CONECT 177 114 CONECT 178 115 CONECT 179 116 CONECT 180 117 CONECT 181 118 CONECT 182 119 CONECT 183 120 CONECT 184 121 CONECT 185 122 CONECT 186 123 CONECT 187 146 CONECT 188 146 CONECT 189 147 CONECT 190 147 CONECT 191 230 CONECT 192 230 CONECT 193 230 CONECT 194 231 CONECT 195 231 CONECT 196 231 CONECT 197 232 CONECT 198 232 CONECT 199 232 CONECT 200 233 CONECT 201 233 CONECT 202 233 CONECT 203 81 141 CONECT 204 82 138 CONECT 205 83 140 CONECT 206 84 148 CONECT 207 87 103 CONECT 208 88 104 CONECT 209 96 140 CONECT 210 97 142 CONECT 211 98 139 CONECT 212 99 143 CONECT 213 100 138 CONECT 214 105 131 CONECT 215 106 132 CONECT 216 124 141 CONECT 217 126 144 CONECT 218 127 145 CONECT 219 129 144 CONECT 220 133 142 CONECT 221 135 143 CONECT 222 134 145 CONECT 223 95 149 CONECT 224 125 149 CONECT 225 128 148 CONECT 226 130 230 CONECT 227 136 231 CONECT 228 137 232 CONECT 229 139 233 CONECT 230 191 192 193 226 CONECT 231 194 195 196 227 CONECT 232 197 198 199 228 CONECT 233 200 201 202 229 CONECT 234 85 CONECT 235 86 CONECT 236 87 CONECT 237 88 CONECT 238 89 CONECT 239 90 CONECT 240 91 CONECT 241 92 CONECT 242 93 CONECT 243 94 CONECT 244 95 CONECT 245 96 CONECT 246 97 CONECT 247 98 CONECT 248 99 CONECT 249 100 CONECT 250 107 CONECT 251 108 CONECT 252 109 CONECT 253 110 CONECT 254 111 CONECT 255 112 CONECT 256 113 CONECT 257 114 CONECT 258 115 CONECT 259 116 CONECT 260 117 CONECT 261 118 CONECT 262 119 CONECT 263 120 CONECT 264 121 CONECT 265 122 CONECT 266 123 CONECT 267 124 CONECT 268 125 CONECT 269 126 CONECT 270 127 CONECT 271 128 CONECT 272 129 CONECT 273 130 CONECT 274 131 CONECT 275 132 CONECT 276 133 CONECT 277 134 CONECT 278 135 CONECT 279 136 CONECT 280 137 CONECT 281 138 CONECT 282 139 CONECT 283 140 CONECT 284 141 CONECT 285 142 CONECT 286 143 CONECT 287 144 CONECT 288 145 MASTER 0 0 0 0 0 0 0 0 288 0 594 0 END SMILES for #<Metabolite:0x00007fdb4846fae8>[H][C@@](O)(CCCCCCCCCCC)CC(=O)O[C@@]1([H])[C@]([H])(O)[C@@]([H])(CO[C@]2([H])O[C@]([H])(CO[C@@]3(C[C@@]([H])(OC4(CC([H])(O)C([H])(O)C([H])(O4)C([H])(O)CO)C(O)O)[C@@]([H])(OC4([H])OC([H])(C([H])(O)CO)[C@@]([H])(O[P+](O)(O)O)[C@]([H])(OC5([H])OC([H])([C@@]([H])(O)COC6([H])OC([H])(C([H])(O)CO)C([H])(O)C([H])(O)C6([H])O)[C@@]([H])(O[P+](O)(O)O)[C@]([H])(OC6([H])OC([H])(COC7([H])OC([H])(CO)C([H])(O)C([H])(O)C7([H])O)C([H])(O)C([H])(OC7([H])OC([H])(CO)C([H])(O)C([H])(O)C7([H])O)C6([H])O)[C@]5([H])O)[C@]4([H])O)[C@]([H])(O3)[C@]([H])(O)CO)C(O)=O)[C@@]([H])(OP(O)(O)=O)[C@]([H])(OC(=O)C[C@@]([H])(CCCCCCCCCCC)OC(=O)CCCCCCCCCCCCC)[C@@]2([H])N=C(O)C[C@@]([H])(CCCCCCCCCCC)OC(=O)CCCCCCCCCCC)O[C@]([H])(OP(O)(O)=O)[C@]1([H])N=C(O)C[C@]([H])(O)CCCCCCCCCCC INCHI for #<Metabolite:0x00007fdb4846fae8>InChI=1S/C149H272N2O78P4/c1-7-13-19-25-31-37-38-44-50-56-62-68-104(169)208-88(66-60-54-48-42-35-29-23-17-11-5)72-106(171)215-132-108(151-102(167)71-87(65-59-53-47-41-34-28-22-16-10-4)207-103(168)67-61-55-49-43-36-30-24-18-12-6)138(204-82-98-112(175)131(214-105(170)70-86(159)64-58-52-46-40-33-27-21-15-9-3)107(139(211-98)229-233(200,201)202)150-101(166)69-85(158)63-57-51-45-39-32-26-20-14-8-2)213-100(130(132)226-230(191,192)193)84-206-148(146(187)188)74-95(223-149(147(189)190)73-89(160)109(172)125(224-149)91(162)76-153)129(128(225-148)93(164)78-155)219-144-122(185)134(136(227-231(194,195)196)126(217-144)92(163)77-154)222-145-123(186)135(137(228-232(197,198)199)127(218-145)94(165)81-203-141-119(182)116(179)117(180)124(216-141)90(161)75-152)221-143-121(184)133(220-142-120(183)115(178)111(174)97(80-157)210-142)113(176)99(212-143)83-205-140-118(181)114(177)110(173)96(79-156)209-140/h85-100,107-145,147,152-165,172-186,189-190,194-199H,7-84H2,1-6H3,(H5-2,150,151,166,167,187,188,191,192,193,200,201,202)/p+2/t85-,86-,87-,88-,89?,90?,91?,92?,93-,94+,95-,96?,97?,98-,99?,100-,107-,108-,109?,110?,111?,112-,113?,114?,115?,116?,117?,118?,119?,120?,121?,122+,123+,124?,125?,126?,127?,128-,129-,130-,131-,132-,133?,134-,135-,136-,137-,138-,139-,140?,141?,142?,143?,144?,145?,148-,149?/m1/s1 3D Structure for #<Metabolite:0x00007fdb4846fae8> | |||||||||||||||||||||||||||||||||||||||||||||||||||
Synonyms |
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Molecular Formula | C149H274N2O78P4 | |||||||||||||||||||||||||||||||||||||||||||||||||||
Average Mass | 3465.6315 | |||||||||||||||||||||||||||||||||||||||||||||||||||
Monoisotopic Mass | 3463.648593342 | |||||||||||||||||||||||||||||||||||||||||||||||||||
IUPAC Name | {[(3R,4R,5S)-6-{[(2R,3R,4R,6R)-6-carboxy-4-{[6-(1,2-dihydroxyethyl)-2-(dihydroxymethyl)-4,5-dihydroxyoxan-2-yl]oxy}-2-[(1R)-1,2-dihydroxyethyl]-6-{[(2R,3S,4R,5R,6R)-6-{[(2R,3S,4R,5R,6R)-5-{[(3R)-1,3-dihydroxytetradecylidene]amino}-3-hydroxy-4-{[(3R)-3-hydroxytetradecanoyl]oxy}-6-(phosphonooxy)oxan-2-yl]methoxy}-5-{[(3R)-3-(dodecanoyloxy)-1-hydroxytetradecylidene]amino}-3-(phosphonooxy)-4-{[(3R)-3-(tetradecanoyloxy)tetradecanoyl]oxy}oxan-2-yl]methoxy}oxan-3-yl]oxy}-4-{[(3S,4R,5R)-4-[(3,5-dihydroxy-4-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-6-({[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}methyl)oxan-2-yl)oxy]-6-[(1S)-2-{[6-(1,2-dihydroxyethyl)-3,4,5-trihydroxyoxan-2-yl]oxy}-1-hydroxyethyl]-3-hydroxy-5-[(trihydroxyphosphaniumyl)oxy]oxan-2-yl]oxy}-2-(1,2-dihydroxyethyl)-5-hydroxyoxan-3-yl]oxy}trihydroxyphosphanium | |||||||||||||||||||||||||||||||||||||||||||||||||||
Traditional Name | {[(3R,4R,5S)-6-{[(2R,3R,4R,6R)-6-carboxy-4-{[6-(1,2-dihydroxyethyl)-2-(dihydroxymethyl)-4,5-dihydroxyoxan-2-yl]oxy}-2-[(1R)-1,2-dihydroxyethyl]-6-{[(2R,3S,4R,5R,6R)-6-{[(2R,3S,4R,5R,6R)-5-{[(3R)-1,3-dihydroxytetradecylidene]amino}-3-hydroxy-4-{[(3R)-3-hydroxytetradecanoyl]oxy}-6-(phosphonooxy)oxan-2-yl]methoxy}-5-{[(3R)-3-(dodecanoyloxy)-1-hydroxytetradecylidene]amino}-3-(phosphonooxy)-4-{[(3R)-3-(tetradecanoyloxy)tetradecanoyl]oxy}oxan-2-yl]methoxy}oxan-3-yl]oxy}-4-{[(3S,4R,5R)-4-[(3,5-dihydroxy-4-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-6-({[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}methyl)oxan-2-yl)oxy]-6-[(1S)-2-{[6-(1,2-dihydroxyethyl)-3,4,5-trihydroxyoxan-2-yl]oxy}-1-hydroxyethyl]-3-hydroxy-5-[(trihydroxyphosphaniumyl)oxy]oxan-2-yl]oxy}-2-(1,2-dihydroxyethyl)-5-hydroxyoxan-3-yl]oxy}trihydroxyphosphanium | |||||||||||||||||||||||||||||||||||||||||||||||||||
CAS Registry Number | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||
SMILES | [H][C@@](O)(CCCCCCCCCCC)CC(=O)O[C@@]1([H])[C@]([H])(O)[C@@]([H])(CO[C@]2([H])O[C@]([H])(CO[C@@]3(C[C@@]([H])(OC4(CC([H])(O)C([H])(O)C([H])(O4)C([H])(O)CO)C(O)O)[C@@]([H])(OC4([H])OC([H])(C([H])(O)CO)[C@@]([H])(O[P+](O)(O)O)[C@]([H])(OC5([H])OC([H])([C@@]([H])(O)COC6([H])OC([H])(C([H])(O)CO)C([H])(O)C([H])(O)C6([H])O)[C@@]([H])(O[P+](O)(O)O)[C@]([H])(OC6([H])OC([H])(COC7([H])OC([H])(CO)C([H])(O)C([H])(O)C7([H])O)C([H])(O)C([H])(OC7([H])OC([H])(CO)C([H])(O)C([H])(O)C7([H])O)C6([H])O)[C@]5([H])O)[C@]4([H])O)[C@]([H])(O3)[C@]([H])(O)CO)C(O)=O)[C@@]([H])(OP(O)(O)=O)[C@]([H])(OC(=O)C[C@@]([H])(CCCCCCCCCCC)OC(=O)CCCCCCCCCCCCC)[C@@]2([H])N=C(O)C[C@@]([H])(CCCCCCCCCCC)OC(=O)CCCCCCCCCCC)O[C@]([H])(OP(O)(O)=O)[C@]1([H])N=C(O)C[C@]([H])(O)CCCCCCCCCCC | |||||||||||||||||||||||||||||||||||||||||||||||||||
InChI Identifier | InChI=1S/C149H272N2O78P4/c1-7-13-19-25-31-37-38-44-50-56-62-68-104(169)208-88(66-60-54-48-42-35-29-23-17-11-5)72-106(171)215-132-108(151-102(167)71-87(65-59-53-47-41-34-28-22-16-10-4)207-103(168)67-61-55-49-43-36-30-24-18-12-6)138(204-82-98-112(175)131(214-105(170)70-86(159)64-58-52-46-40-33-27-21-15-9-3)107(139(211-98)229-233(200,201)202)150-101(166)69-85(158)63-57-51-45-39-32-26-20-14-8-2)213-100(130(132)226-230(191,192)193)84-206-148(146(187)188)74-95(223-149(147(189)190)73-89(160)109(172)125(224-149)91(162)76-153)129(128(225-148)93(164)78-155)219-144-122(185)134(136(227-231(194,195)196)126(217-144)92(163)77-154)222-145-123(186)135(137(228-232(197,198)199)127(218-145)94(165)81-203-141-119(182)116(179)117(180)124(216-141)90(161)75-152)221-143-121(184)133(220-142-120(183)115(178)111(174)97(80-157)210-142)113(176)99(212-143)83-205-140-118(181)114(177)110(173)96(79-156)209-140/h85-100,107-145,147,152-165,172-186,189-190,194-199H,7-84H2,1-6H3,(H5-2,150,151,166,167,187,188,191,192,193,200,201,202)/p+2/t85-,86-,87-,88-,89?,90?,91?,92?,93-,94+,95-,96?,97?,98-,99?,100-,107-,108-,109?,110?,111?,112-,113?,114?,115?,116?,117?,118?,119?,120?,121?,122+,123+,124?,125?,126?,127?,128-,129-,130-,131-,132-,133?,134-,135-,136-,137-,138-,139-,140?,141?,142?,143?,144?,145?,148-,149?/m1/s1 | |||||||||||||||||||||||||||||||||||||||||||||||||||
InChI Key | FFWQRZVPZLTLGX-LCELMEHOSA-P | |||||||||||||||||||||||||||||||||||||||||||||||||||
Chemical Taxonomy | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Description | Belongs to the class of organic compounds known as saccharolipids. Saccharolipids are compounds in which fatty acids are linked directly to a sugar backbone, forming structures that are compatible with membrane bilayers. In the saccharolipids, a sugar substitutes for the glycerol backbone that is present in glycerolipids and glycerophospholipids. The most familiar saccharolipids contain an acylated glucosamine. In contrast to others glycolipids, the fatty acid is not glycosidically linked to the sugar moiety. | |||||||||||||||||||||||||||||||||||||||||||||||||||
Kingdom | Organic compounds | |||||||||||||||||||||||||||||||||||||||||||||||||||
Super Class | Lipids and lipid-like molecules | |||||||||||||||||||||||||||||||||||||||||||||||||||
Class | Saccharolipids | |||||||||||||||||||||||||||||||||||||||||||||||||||
Sub Class | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||
Direct Parent | Saccharolipids | |||||||||||||||||||||||||||||||||||||||||||||||||||
Alternative Parents |
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Substituents |
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Molecular Framework | Aliphatic heteromonocyclic compounds | |||||||||||||||||||||||||||||||||||||||||||||||||||
External Descriptors | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||
Functional Ontology | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Not Available | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Physical Properties | ||||||||||||||||||||||||||||||||||||||||||||||||||||
State | Expected Solid | |||||||||||||||||||||||||||||||||||||||||||||||||||
Predicted Properties |
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Spectra | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Not Available | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Biological Properties | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Cellular Locations | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||
Biospecimen Locations | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||
Tissue Locations | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||
Associated OMIM IDs | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Human Proteins and Enzymes | ||||||||||||||||||||||||||||||||||||||||||||||||||||
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Human Pathways | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Pathways |
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Metabolic Reactions | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Not Available | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Health Effects and Bioactivity | ||||||||||||||||||||||||||||||||||||||||||||||||||||
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Microbial Sources | ||||||||||||||||||||||||||||||||||||||||||||||||||||
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Exposure Sources | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Host Biospecimen and Location | ||||||||||||||||||||||||||||||||||||||||||||||||||||
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External Links | ||||||||||||||||||||||||||||||||||||||||||||||||||||
HMDB ID | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||
DrugBank ID | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||
Phenol Explorer Compound ID | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||
FooDB ID | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||
KNApSAcK ID | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||
Chemspider ID | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||
KEGG Compound ID | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||
BioCyc ID | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||
BiGG ID | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||
Wikipedia Link | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||
METLIN ID | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||
PubChem Compound | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||
PDB ID | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||
ChEBI ID | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||
Food Biomarker Ontology | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||
References | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Synthesis Reference | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||
General References |
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