| MMDBm0000583 | Saccharomyces cerevisiae | Fungi | Ascomycota | Human Feces | Unknown | YMDB |
| MMDBm0002785 | Yersinia pseudotuberculosis YPIII | Bacteria | Proteobacteria | Human | Not Available | RHEA |
| MMDBm0001667 | Haliangium ochraceum DSM 14365 | Bacteria | Proteobacteria | Not Available | Not Available | RHEA |
| MMDBm0001884 | Mycobacterium bovis AF2122/97 | Bacteria | Actinobacteria | Cattle | Not Available | RHEA |
| MMDBm0002496 | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 | Bacteria | Proteobacteria | Human | Not Available | RHEA |
| MMDBm0002397 | Pseudomonas fluorescens Pf0-1 | Bacteria | Proteobacteria | Human Feces | Not Available | RHEA |
| MMDBm0001959 | Nostoc sp. PCC 7120 | Bacteria | Cyanobacteria | Not Available | Not Available | RHEA |
| MMDBm0001186 | Acinetobacter baumannii AYE | Bacteria | Proteobacteria | Human | Not Available | RHEA |
| MMDBm0001452 | Clavibacter michiganensis subsp. michiganensis NCPPB 382 | Bacteria | Actinobacteria | Not Available | Not Available | RHEA |
| MMDBm0063417 | Fusarium proliferatum | Fungi | Ascomycota | Human Feces | Not Available | RHEA |
| MMDBm0002045 | Zymomonas mobilis subsp. mobilis ZM4 | Bacteria | Proteobacteria | Not Available | Not Available | RHEA |
| MMDBm0002557 | Staphylococcus aureus subsp. aureus COL | Bacteria | Firmicutes | Human | Not Available | RHEA |
| MMDBm0001891 | Mycobacterium bovis BCG str. Pasteur 1173P2 | Bacteria | Actinobacteria | Human | Not Available | RHEA |
| MMDBm0002495 | Salmonella enterica subsp. enterica serovar Newport str. SL254 | Bacteria | Proteobacteria | Human | Not Available | RHEA |
| MMDBm0610855 | Vibrio harveyi | Bacteria | Proteobacteria | Not Available | Not Available | RHEA |
| MMDBm0001177 | Acidothermus cellulolyticus 11B | Bacteria | Actinobacteria | Not Available | Not Available | RHEA |
| MMDBm0001453 | Clavibacter michiganensis subsp. sepedonicus | Bacteria | Actinobacteria | Not Available | Not Available | RHEA |
| MMDBm0002634 | Streptomyces avermitilis MA-4680 | Bacteria | Actinobacteria | Not Available | Not Available | RHEA |
| MMDBm0002556 | Staphylococcus aureus subsp. aureus Mu50 | Bacteria | Firmicutes | Human | Not Available | RHEA |
| MMDBm0882069 | Synechocystis sp. PCC 6803 substr. Kazusa | Bacteria | Not Available | Not Available | Not Available | RHEA |
| MMDBm0000114 | Clostridium acetobutylicum ATCC 824 | Bacteria | Firmicutes | Human Feces | Not Available | RHEA |
| MMDBm0001899 | Mycobacterium bovis BCG str. Tokyo 172 | Bacteria | Actinobacteria | Human | Not Available | RHEA |
| MMDBm0550379 | Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150 | Bacteria | Proteobacteria | Not Available | Not Available | RHEA |
| MMDBm0002391 | Pseudomonas aeruginosa PAO1 | Bacteria | Proteobacteria | Human | Not Available | RHEA |
| MMDBm0001170 | Acidiphilium cryptum JF-5 | Bacteria | Proteobacteria | Not Available | Not Available | RHEA |
