| MMDBm0000162 | Escherichia coli CFT073 | Bacteria | Proteobacteria | Human | Not Available | RHEA |
| MMDBm0001343 | Burkholderia vietnamiensis G4 | Bacteria | Proteobacteria | Not Available | Not Available | RHEA |
| MMDBm0002500 | Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91 | Bacteria | Proteobacteria | Human | Not Available | RHEA |
| MMDBm0002392 | Pseudomonas putida KT2440 | Bacteria | Proteobacteria | Not Available | Not Available | RHEA |
| MMDBm0572837 | Acinetobacter junii SH205 | Bacteria | Proteobacteria | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0547370 | Raoultella planticola ATCC 33531 | Bacteria | Proteobacteria | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0001859 | Methylobacterium populi BJ001 | Bacteria | Proteobacteria | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0001517 | Dechloromonas aromatica RCB | Bacteria | Proteobacteria | Not Available | Not Available | RHEA |
| MMDBm0001323 | Buchnera aphidicola str. Sg (Schizaphis graminum) | Bacteria | Proteobacteria | Not Available | Not Available | RHEA |
| MMDBm0002509 | Shewanella oneidensis MR-1 | Bacteria | Proteobacteria | Not Available | Not Available | RHEA |
| MMDBm0002453 | Rhodopseudomonas palustris BisA53 | Bacteria | Proteobacteria | Not Available | Not Available | RHEA |
| MMDBm0509991 | Bilophila wadsworthia 3_1_6 | Bacteria | Proteobacteria | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0610806 | Vibrio fluvialis 560 | Bacteria | Proteobacteria | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0501221 | Parasutterella excrementihominis YIT 11859 | Bacteria | Proteobacteria | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0002784 | Yersinia pestis Angola | Bacteria | Proteobacteria | Human | Not Available | RHEA |
| MMDBm0503982 | Neisseria mucosa ATCC 25996 | Bacteria | Proteobacteria | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0540120 | Escherichia albertii KF1 | Bacteria | Proteobacteria | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0001342 | Burkholderia mallei NCTC 10247 | Bacteria | Proteobacteria | Human | Not Available | RHEA |
| MMDBm0001224 | Anaeromyxobacter sp. K | Bacteria | Proteobacteria | Not Available | Not Available | RHEA |
| MMDBm0002404 | Pseudomonas aeruginosa PA7 | Bacteria | Proteobacteria | Human | Not Available | RHEA |
| MMDBm0524258 | Moritella abyssi | Bacteria | Proteobacteria | Not Available | Not Available | RHEA |
| MMDBm0580255 | Pseudomonas alcaliphila 34 | Bacteria | Proteobacteria | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0515554 | Helicobacter winghamensis ATCC BAA-430 | Bacteria | Proteobacteria | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0002441 | Rhodobacter sphaeroides ATCC 17025 | Bacteria | Proteobacteria | Not Available | Not Available | RHEA |
| MMDBm0001314 | Brucella abortus bv. 1 str. 9-941 | Bacteria | Proteobacteria | Human | Not Available | RHEA |
