MiMeDB: Showing metabocard for (2Z,4Z)-2,3-dichloromuconic acid (MMDBc0032856)

Record Information

Version

1.0

Status

Detected and Quantified

Creation Date

2021-11-18 22:02:51 UTC

Update Date

2022-08-31 21:44:33 UTC

Metabolite ID

MMDBc0032856

Metabolite Identification

Common Name

(2Z,4Z)-2,3-dichloromuconic acid

Description

A 2,3-dichloromuconic acid in which both double bonds have Z geochemistry.

Structure

MOL SDF PDB SMILES InChI


  Mrv1652311182123022D          

 14 13  0  0  0  0            999 V2000
    1.2375   -0.7145    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0625   -0.7145    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8250    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.4750   -0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4125   -0.7145    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2375    0.7145    0.0000 Cl  0  0  0  0  0  0  0  0  0  0  0  0
   -0.4125    0.7145    0.0000 Cl  0  0  0  0  0  0  0  0  0  0  0  0
    3.3000   -0.0000    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.0625    0.7145    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000   -1.4289    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2375   -0.7145    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.8250   -1.4289    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.4750   -1.4289    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
  2  1  2  0  0  0  0
  3  1  1  0  0  0  0
  4  2  1  0  0  0  0
  5  3  2  0  0  0  0
  6  5  1  0  0  0  0
  7  3  1  0  0  0  0
  8  5  1  0  0  0  0
  9  4  2  0  0  0  0
 10  4  1  0  0  0  0
 11  6  2  0  0  0  0
 12  6  1  0  0  0  0
 13  1  1  0  0  0  0
 14  2  1  0  0  0  0
M  END
> <DATABASE_ID>
MMDBc0032856

> <DATABASE_NAME>
MIME

> <SMILES>
[H]\C(=C(/[H])\C(\Cl)=C(\Cl)C(O)=O)C(O)=O

> <INCHI_IDENTIFIER>
InChI=1S/C6H4Cl2O4/c7-3(1-2-4(9)10)5(8)6(11)12/h1-2H,(H,9,10)(H,11,12)/b2-1-,5-3-

> <INCHI_KEY>
SOSGLWHQVQUMLM-NWJCXACMSA-N

> <FORMULA>
C6H4Cl2O4

> <MOLECULAR_WEIGHT>
210.99

> <EXACT_MASS>
209.948664

> <JCHEM_ACCEPTOR_COUNT>
4

> <JCHEM_ATOM_COUNT>
16

> <JCHEM_AVERAGE_POLARIZABILITY>
16.14608768931721

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
2

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
(2Z,4Z)-2,3-dichlorohexa-2,4-dienedioic acid

> <ALOGPS_LOGP>
1.56

> <JCHEM_LOGP>
1.1120167576666666

> <ALOGPS_LOGS>
-2.81

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
0

> <JCHEM_PHYSIOLOGICAL_CHARGE>
-2

> <JCHEM_PKA>
3.8260225466729905

> <JCHEM_PKA_STRONGEST_ACIDIC>
2.9058307750072

> <JCHEM_POLAR_SURFACE_AREA>
74.6

> <JCHEM_REFRACTIVITY>
44.433099999999996

> <JCHEM_ROTATABLE_BOND_COUNT>
3

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
3.29e-01 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(2Z,4Z)-2,3-dichlorohexa-2,4-dienedioic acid

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 18-NOV-21   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   18-NOV-21         0                                  
HETATM    1  C   UNK     0       2.310  -1.334   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       3.850  -1.334   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0       1.540   0.000   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       4.620  -0.000   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       0.000   0.000   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0      -0.770  -1.334   0.000  0.00  0.00           C+0
HETATM    7 Cl   UNK     0       2.310   1.334   0.000  0.00  0.00          Cl+0
HETATM    8 Cl   UNK     0      -0.770   1.334   0.000  0.00  0.00          Cl+0
HETATM    9  O   UNK     0       6.160  -0.000   0.000  0.00  0.00           O+0
HETATM   10  O   UNK     0       3.850   1.334   0.000  0.00  0.00           O+0
HETATM   11  O   UNK     0       0.000  -2.667   0.000  0.00  0.00           O+0
HETATM   12  O   UNK     0      -2.310  -1.334   0.000  0.00  0.00           O+0
HETATM   13  H   UNK     0       1.540  -2.667   0.000  0.00  0.00           H+0
HETATM   14  H   UNK     0       4.620  -2.667   0.000  0.00  0.00           H+0
CONECT    1    2    3   13                                                  
CONECT    2    1    4   14                                                  
CONECT    3    1    5    7                                                  
CONECT    4    2    9   10                                                  
CONECT    5    3    6    8                                                  
CONECT    6    5   11   12                                                  
CONECT    7    3                                                            
CONECT    8    5                                                            
CONECT    9    4                                                            
CONECT   10    4                                                            
CONECT   11    6                                                            
CONECT   12    6                                                            
CONECT   13    1                                                            
CONECT   14    2                                                            
MASTER        0    0    0    0    0    0    0    0   14    0   26    0
END

Synonyms

Value	Source
(2Z,4Z)-2,3-Dichloromuconate	Generator

Molecular Formula

C₆H₄Cl₂O₄

Average Mass

210.99

Monoisotopic Mass

209.948664

IUPAC Name

(2Z,4Z)-2,3-dichlorohexa-2,4-dienedioic acid

Traditional Name

(2Z,4Z)-2,3-dichlorohexa-2,4-dienedioic acid

CAS Registry Number

Not Available

SMILES

[H]\C(=C(/[H])\C(\Cl)=C(\Cl)C(O)=O)C(O)=O

InChI Identifier

InChI=1S/C6H4Cl2O4/c7-3(1-2-4(9)10)5(8)6(11)12/h1-2H,(H,9,10)(H,11,12)/b2-1-,5-3-

InChI Key

SOSGLWHQVQUMLM-NWJCXACMSA-N

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as medium-chain fatty acids. These are fatty acids with an aliphatic tail that contains between 4 and 12 carbon atoms.

Kingdom

Organic compounds

Super Class

Lipids and lipid-like molecules

Class

Fatty Acyls

Sub Class

Fatty acids and conjugates

Direct Parent

Medium-chain fatty acids

Alternative Parents

Substituents

Medium-chain fatty acid
Halogenated fatty acid
Dicarboxylic acid or derivatives
Unsaturated fatty acid
Alpha-halocarboxylic acid
Alpha-halocarboxylic acid or derivatives
Vinylogous halide
Carboxylic acid derivative
Carboxylic acid
Chloroalkene
Haloalkene
Vinyl chloride
Vinyl halide
Organic oxide
Hydrocarbon derivative
Organohalogen compound
Organochloride
Organooxygen compound
Carbonyl group
Organic oxygen compound
Aliphatic acyclic compound

Molecular Framework

Aliphatic acyclic compounds

External Descriptors

Not Available

Functional Ontology

Not Available

Physical Properties

State

Expected Solid

Predicted Properties

Property	Value	Source
Water Solubility	0.33 g/L	ALOGPS
logP	1.56	ALOGPS
logP	1.11	ChemAxon
logS	-2.8	ALOGPS
pKa (Strongest Acidic)	2.91	ChemAxon
Physiological Charge	-2	ChemAxon
Hydrogen Acceptor Count	4	ChemAxon
Hydrogen Donor Count	2	ChemAxon
Polar Surface Area	74.6 Å²	ChemAxon
Rotatable Bond Count	3	ChemAxon
Refractivity	44.43 m³·mol⁻¹	ChemAxon
Polarizability	16.15 Å³	ChemAxon
Number of Rings	0	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

Spectra

Spectrum Type	Description	Splash Key	Deposition Date	View
Predicted GC-MS	Predicted GC-MS Spectrum - GC-MS (TMS_2_1) - 70eV, Positive	Not Available	2022-08-08	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 10V, Positive	Not Available	2022-08-10	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 20V, Positive	Not Available	2022-08-10	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 40V, Positive	Not Available	2022-08-10	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 10V, Negative	Not Available	2022-08-10	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 20V, Negative	Not Available	2022-08-10	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 40V, Negative	Not Available	2022-08-10	View Spectrum

Biological Properties

Cellular Locations

Not Available

Biospecimen Locations

Not Available

Tissue Locations

Not Available

Associated OMIM IDs

114500 (Colorectal cancer)
610247 (Eosinophilic esophagitis)

Human Proteins and Enzymes

Protein ID	Protein Name	Protein Type	Uniprot ID	Species

Human Pathways

Pathways

Name	SMPDB/PathBank

Metabolic Reactions

Reactions

Reaction ID	Precursor	Product	Enzyme	Reaction Type	Data Source	Reference

Health Effects and Bioactivity

Health Outcome/Bioactivity	Metabolite Response/Effect	Evidence Type	Host and Biospecimen	Data Source	Reference

Microbial Sources

Superkingdom/Kingdom	Phylum	Total species	Hosts and Body Sites	Microbial Links
Bacteria	Proteobacteria	2	Human ; Human sputum; Human subgingival plaque; Human feces	Unknown

Exposure Sources

Source Type	Source Sub-type	Species	Data Source	Reference

Host Biospecimen and Location

Host and Biospecimen	Status	Mean	Std	Min	Max	Units	Age	Sex	Health Condition	Data Source	Reference

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FooDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

35801695

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

25244169

PDB ID

Not Available

ChEBI ID

91010

Food Biomarker Ontology

Not Available

References

Synthesis Reference

Not Available

General References

Bansal P, Morgat A, Axelsen KB, Muthukrishnan V, Coudert E, Aimo L, Hyka-Nouspikel N, Gasteiger E, Kerhornou A, Neto TB, Pozzato M, Blatter MC, Ignatchenko A, Redaschi N, Bridge A: Rhea, the reaction knowledgebase in 2022. Nucleic Acids Res. 2022 Jan 7;50(D1):D693-D700. doi: 10.1093/nar/gkab1016. [PubMed:34755880 ]

Showing metabocard for (2Z,4Z)-2,3-dichloromuconic acid (MMDBc0032856)

MOL for #<Metabolite:0x00007fecc8530bf8>

3D MOL for #<Metabolite:0x00007fecc8530bf8>

3D SDF for #<Metabolite:0x00007fecc8530bf8>

3D-SDF for #<Metabolite:0x00007fecc8530bf8>

PDB for #<Metabolite:0x00007fecc8530bf8>

3D PDB for #<Metabolite:0x00007fecc8530bf8>

SMILES for #<Metabolite:0x00007fecc8530bf8>

INCHI for #<Metabolite:0x00007fecc8530bf8>

Structure for #<Metabolite:0x00007fecc8530bf8>

3D Structure for #<Metabolite:0x00007fecc8530bf8>