MiMeDB: Showing metabocard for potassium atom (MMDBc0033125)

Record Information

Version

1.0

Status

Detected and Quantified

Creation Date

2021-11-19 04:35:47 UTC

Update Date

2022-08-31 22:26:29 UTC

Metabolite ID

MMDBc0033125

Metabolite Identification

Common Name

potassium atom

Description

Potassium cation, also known as 19K or kalium, belongs to the class of inorganic compounds known as homogeneous alkali metal compounds. These are inorganic compounds containing only metal atoms,with the largest atom being a alkali metal atom. The concentration differences of these charged particles causes a difference in electric potential between the inside and outside of cells, known as the membrane potential. Potassium cation is possibly neutral. In humans, potassium cation is involved in alprenolol action pathway. The balance between potassium and sodium is maintained by ion pumps in the cell membrane.

Structure

MOL SDF PDB SMILES InChI

Synonyms

Value	Source
19K	ChEBI
K	ChEBI
Kalium	ChEBI
Potasio	ChEBI
Potassium	ChEBI

Molecular Formula

Average Mass

39.0983

Monoisotopic Mass

38.96370649

IUPAC Name

potassium

Traditional Name

potassium

CAS Registry Number

Not Available

SMILES

[K]

InChI Identifier

InChI=1S/K

InChI Key

ZLMJMSJWJFRBEC-UHFFFAOYSA-N

Chemical Taxonomy

Description

Belongs to the class of inorganic compounds known as homogeneous alkali metal compounds. These are inorganic compounds containing only metal atoms,with the largest atom being a alkali metal atom.

Kingdom

Inorganic compounds

Super Class

Homogeneous metal compounds

Class

Homogeneous alkali metal compounds

Sub Class

Not Available

Direct Parent

Homogeneous alkali metal compounds

Alternative Parents

Not Available

Substituents

Homogeneous alkali metal

Molecular Framework

Not Available

External Descriptors

alkali metal atom (CHEBI:26216 )

Functional Ontology

Not Available

Physical Properties

State

Expected Solid

Predicted Properties

Property	Value	Source
logP	0.2	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	0	ChemAxon
Hydrogen Donor Count	0	ChemAxon
Polar Surface Area	0 Å²	ChemAxon
Rotatable Bond Count	0	ChemAxon
Refractivity	0 m³·mol⁻¹	ChemAxon
Polarizability	1.78 Å³	ChemAxon
Number of Rings	0	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	Yes	ChemAxon
MDDR-like Rule	No	ChemAxon

Spectra

Spectrum Type	Description	Splash Key	Deposition Date	View
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 10V, Positive	splash10-0006-9000000000-bf8fb614ba47283506fb	2017-07-26	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 20V, Positive	splash10-0006-9000000000-bf8fb614ba47283506fb	2017-07-26	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 40V, Positive	splash10-0006-9000000000-bf8fb614ba47283506fb	2017-07-26	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 10V, Negative	splash10-000i-9000000000-3bc43db1b4fc1fc701b8	2017-07-26	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 20V, Negative	splash10-000i-9000000000-3bc43db1b4fc1fc701b8	2017-07-26	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 40V, Negative	splash10-000i-9000000000-3bc43db1b4fc1fc701b8	2017-07-26	View Spectrum

Biological Properties

Cellular Locations

Not Available

Biospecimen Locations

Not Available

Tissue Locations

Not Available

Associated OMIM IDs

114500 (Colorectal cancer)
610247 (Eosinophilic esophagitis)

Human Proteins and Enzymes

Protein ID	Protein Name	Protein Type	Uniprot ID	Species

Human Pathways

Pathways

Name	SMPDB/PathBank

Metabolic Reactions

Not Available

Health Effects and Bioactivity

Health Outcome/Bioactivity	Metabolite Response/Effect	Evidence Type	Host and Biospecimen	Data Source	Reference

Microbial Sources

Superkingdom/Kingdom	Phylum	Total species	Hosts and Body Sites	Microbial Links
Eukaryota/Fungi	Ascomycota	1	Human feces; Human saliva	Unknown

Exposure Sources

Source Type	Source Sub-type	Species	Data Source	Reference

Host Biospecimen and Location

Host and Biospecimen	Status	Mean	Std	Min	Max	Units	Age	Sex	Health Condition	Data Source	Reference

External Links

HMDB ID

Not Available

DrugBank ID

DB01345

Phenol Explorer Compound ID

Not Available

FooDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

5462222

PDB ID

Not Available

ChEBI ID

26216

Food Biomarker Ontology

Not Available

References

Synthesis Reference

Not Available

General References

Roomans GM, Seveus LA: Subcellular localization of diffusible ions in the yeast Saccharomyces cerevisiae: quantitative microprobe analysis of thin freeze-dried sections. J Cell Sci. 1976 Jun;21(1):119-27. doi: 10.1242/jcs.21.1.119. [PubMed:777014 ]
Gaber RF, Styles CA, Fink GR: TRK1 encodes a plasma membrane protein required for high-affinity potassium transport in Saccharomyces cerevisiae. Mol Cell Biol. 1988 Jul;8(7):2848-59. doi: 10.1128/mcb.8.7.2848-2859.1988. [PubMed:3043197 ]
Herrgard MJ, Swainston N, Dobson P, Dunn WB, Arga KY, Arvas M, Bluthgen N, Borger S, Costenoble R, Heinemann M, Hucka M, Le Novere N, Li P, Liebermeister W, Mo ML, Oliveira AP, Petranovic D, Pettifer S, Simeonidis E, Smallbone K, Spasic I, Weichart D, Brent R, Broomhead DS, Westerhoff HV, Kirdar B, Penttila M, Klipp E, Palsson BO, Sauer U, Oliver SG, Mendes P, Nielsen J, Kell DB: A consensus yeast metabolic network reconstruction obtained from a community approach to systems biology. Nat Biotechnol. 2008 Oct;26(10):1155-60. doi: 10.1038/nbt1492. [PubMed:18846089 ]
Ramirez-Gaona M, Marcu A, Pon A, Guo AC, Sajed T, Wishart NA, Karu N, Djoumbou Feunang Y, Arndt D, Wishart DS: YMDB 2.0: a significantly expanded version of the yeast metabolome database. Nucleic Acids Res. 2017 Jan 4;45(D1):D440-D445. doi: 10.1093/nar/gkw1058. Epub 2016 Nov 28. [PubMed:27899612 ]

Showing metabocard for potassium atom (MMDBc0033125)

MOL for #<Metabolite:0x00007f46d81b8c28>

3D MOL for #<Metabolite:0x00007f46d81b8c28>

3D SDF for #<Metabolite:0x00007f46d81b8c28>

3D-SDF for #<Metabolite:0x00007f46d81b8c28>

PDB for #<Metabolite:0x00007f46d81b8c28>

3D PDB for #<Metabolite:0x00007f46d81b8c28>

SMILES for #<Metabolite:0x00007f46d81b8c28>

INCHI for #<Metabolite:0x00007f46d81b8c28>

Structure for #<Metabolite:0x00007f46d81b8c28>

3D Structure for #<Metabolite:0x00007f46d81b8c28>