MiMeDB: Sinorhizobium sp. (MMDBm0449773)

Microbe Identification

Microbe name

Sinorhizobium sp.

NCBI Taxonomy ID

42445

Microbe Taxonomy

Superkingdom

Bacteria

Kingdom

Eubacteria

Phylum

Proteobacteria

Class

Alphaproteobacteria

Order

Rhizobiales

Family

Rhizobiaceae

Genus

Sinorhizobium

Species

sp.

Strain

Not Available

Microbe Properties

Gram staining properties

Positive

Shape

Not Available

Mobility

Not Available

Flagellar presence

Not Available

Number of membranes

Not Available

Oxygen preference

Not Available

Optimal temperature

Not Available

Temperature range

Not Available

Habitat

Not Available

Biotic relationship

Not Available

Cell arrangement

Not Available

Sporulation

Not Available

Metabolism

Not Available

Energy source

Not Available

Host and Biospecimens

Host	Body site	Biospecimen	Details	Data Source	Reference
Human	Gut	Feces	Expected but not quantified

Health Effects

Host	Related Health Condition	Biospecimen	Microbal response/effect	Data Source	Reference

Related Metabolites

Metabolic Reactions

Reactions

Reaction ID	Precursor	Product	Enzyme	Reaction Type	Data Source	Reference
MMDBr0012988	5,6-Dimethylbenzimidazole	N1-(5-Phospho-a-D-ribosyl)-5,6-dimethylbenzimidazole	Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase	Transfer of a ribosyl group	RHEA	34755880
MMDBr0013014	Hydrogen Ion	D-1-Aminopropan-2-ol O-phosphate	Threonine-phosphate decarboxylase	Decarboxylation	RHEA	34755880
MMDBr0013017	Adenosine triphosphate	adenosylcob(III)yrinate a,c-diamide	Corrinoid adenosyltransferase	Transfers of an adenosyl group	RHEA	34755880
MMDBr0013149	precorrin-3B	Hydrogen Ion	Cobalamin biosynthesis protein CobIJ	Methylation	RHEA	34755880
MMDBr0013415	Adenosine triphosphate	ADP	Aerobic cobaltochelatase subunit CobN	Chelation	RHEA	34755880
MMDBr0013461	Adenosyl cobinamide	adenosylcob(III)inamide phosphate	Bifunctional adenosylcobalamin biosynthesis protein CobP	Synthesis	RHEA	34755880
MMDBr0013462	Adenosyl cobinamide	adenosylcob(III)inamide phosphate	Bifunctional adenosylcobalamin biosynthesis protein CobP	Synthesis	RHEA	34755880
MMDBr0013489	adenosylcob(III)inamide-GDP	coenzyme B12	Adenosylcobinamide-GDP ribazoletransferase	Transfer of ribazole	RHEA	34755880
MMDBr0013574	Precorrin-2	Hydrogen Ion	Precorrin-2 C(20)-methyltransferase	Methylation	RHEA	34755880
MMDBr0013640	Hydrogen Ion	Water	Precorrin-3B synthase	Synthesis	RHEA	34755880
MMDBr0013660	precorrin-6B	Carbon dioxide	Precorrin-6Y C(5,15)-methyltransferase [decarboxylating]	Methylation	RHEA	34755880
MMDBr0013747	Water	Acetic acid	Precorrin-6A synthase [deacetylating]	Synthesis	RHEA	34755880
MMDBr0013838	S-Adenosylmethionine	Hydrogen Ion	Uroporphyrinogen-III C-methyltransferase	Methylation	RHEA	34755880
MMDBr0013839	S-Adenosylmethionine	Hydrogen Ion	Uroporphyrinogen-III C-methyltransferase	Methylation	RHEA	34755880
MMDBr0014161	Precorrin-1	Precorrin-2	Uroporphyrinogen-III C-methyltransferase	Methylation	RHEA	34755880
MMDBr0014162	Precorrin-1	Precorrin-2	Uroporphyrinogen-III C-methyltransferase	Methylation	RHEA	34755880
MMDBr0014165	Precorrin 4	Precorrin 5	Precorrin-4 C(11)-methyltransferase	Methylation	RHEA	34755880
MMDBr0014218	Hydrogen Ion	Hydrogenobyrinate	Precorrin-8X methylmutase	Conversion of precorrin-8X to hydrogenobyrinate	RHEA	34755880
MMDBr0014239	adenosylcob(III)inamide phosphate	adenosylcob(III)inamide-GDP	Bifunctional adenosylcobalamin biosynthesis protein CobP	Synthesis	RHEA	34755880
MMDBr0014328	NADP(+)	Hydrogen Ion	Precorrin-6A reductase	Reduction	RHEA	34755880
MMDBr0014353	adenosylcob(III)inamide-GDP	adenosylcob(III)alamin 5'-phosphate	Adenosylcobinamide-GDP ribazoletransferase	Transfer of ribazole	RHEA	34755880
MMDBr0014852	Adenosine triphosphate	coenzyme B12	Corrinoid adenosyltransferase	Transfers of an adenosyl group	RHEA	34755880
MMDBr0015149	S-Adenosylmethionine	Hydrogen Ion	Siroheme synthase	Methylation; Synthesis	RHEA	34755880
MMDBr0015150	S-Adenosylmethionine	Hydrogen Ion	Uroporphyrinogen-III C-methyltransferase	Methylation	RHEA	34755880
MMDBr0017849	Adenosine triphosphate	ADP	Hydrogenobyrinate a,c-diamide synthase	Synthesis	RHEA	34755880
MMDBr0024349	Adenosine triphosphate	Hydrogen Ion	Diacylglycerol kinase	Phosphorylation	RHEA	34755880

Genome Data

Genome Link

Not Available

Genome Length

Not Available

# Predicted Proteins

GenBank Sequence Modification Date

17-FEB-2022

MiMeDB Deposition Date

Reference

PMID: 17704766

Source Links

GenBank