MiMeDB: Host and Site

Metabolites
Microbes

Metabolite ID	Name	Formula MW	Host & Biospecimen (status - Q; D; E; P)	# Related Microbes	Metabolite Type	Additional sources
MMDBc0018562	Engyodontiumone H	C₁₆H₁₄O₇ 318.281	Not Available	2	Co-metabolite	Not Available
MMDBc0018561	Cyclo-(L-Trp-L-Tyr), (C) Cyclo-(L- Trp-L-Ile), (D) Cyclo-(L-Trp-L-Leu)	C₂₀H₁₉N₃O₃ 349.3832	Not Available	1	Co-metabolite	Not Available
MMDBc0018547	Isochromophilone VII	C₂₁H₂₅ClO₆ 408.88	Not Available	2	Co-metabolite	Not Available
MMDBc0018546	Penitrem D	C₃₇H₄₅NO₄ 567.77	Not Available	2	Co-metabolite	Not Available
MMDBc0018545	Lactococcin mmfii	C₄₂H₆₃N₁₅O₁₅S 1050.12	Not Available	1	Co-metabolite	Not Available
MMDBc0018541	2,3,4-trihydroxy-6-(hydroxymethyl)-5-methylbenzylacohol	C₉H₁₂O₅ 200.19	Not Available	1	Co-metabolite	Not Available
MMDBc0018530	Bezerramycin B	C₁₆H₁₂N₂O₆ 328.28	Not Available	1	Co-metabolite	Not Available
MMDBc0018520	Tramspiroin A	C₁₅H₂₂O₃ 250.338	Not Available	1	Co-metabolite	Not Available
MMDBc0018515	Atromentin	C₁₈H₁₂O₆ 324.288	Not Available	3	Co-metabolite	Not Available
MMDBc0018513	Helvolinic acid	C₃₁H₄₂O₇ 526.67	Not Available	1	Co-metabolite	Not Available
MMDBc0018512	Fusaperazine C	C₁₇H₂₂N₂O₄ 318.373	Not Available	1	Co-metabolite	Not Available
MMDBc0018511	Burkholone	C₁₈H₂₃NO 269.388	Not Available	1	Co-metabolite	Not Available
MMDBc0018507	Conidiogenone B	C₂₀H₃₀O 286.459	Not Available	1	Co-metabolite	Not Available
MMDBc0018498	Hydroxy-fumonisin C1	C₃₃H₅₇NO₁₆ 723.81	Not Available	1	Co-metabolite	Not Available
MMDBc0018488	Polymyxin B6	C₅₆H₉₈N₁₆O₁₄ 1219.498	Not Available	1	Co-metabolite	Not Available
MMDBc0018464	Sterebin Q2	C₂₀H₃₆O₆ 372.502	Not Available	1	Co-metabolite	Not Available
MMDBc0018461	Brevianamide K	C₂₁H₂₁N₃O₂ 347.418	Not Available	1	Co-metabolite	Not Available
MMDBc0018451	Pestaloficiol E	C₁₇H₂₆O₅ 310.39	Not Available	1	Co-metabolite	Not Available
MMDBc0018448	Bk-1229	C₅₂H₈₃N₁₁O₂₃ 1230.29	Not Available	1	Co-metabolite	Not Available
MMDBc0018426	6-methoxyspirotryprostatin B	C₂₂H₂₃N₃O₄ 393.443	Not Available	3	Co-metabolite	Not Available
MMDBc0018424	Aspernigrin B	C₂₇H₂₄N₂O₅ 456.498	Not Available	1	Co-metabolite	Not Available
MMDBc0018422	Ergoptine	C₃₁H₃₉N₅O₅ 561.683	Not Available	1	Co-metabolite	Not Available
MMDBc0018413	10-Oxodihydrobotry-1(9),4(5)-diendial	C₁₅H₂₀O₂ 232.323	Not Available	1	Co-metabolite	Not Available
MMDBc0018403	Bromosphaerone	C₂₀H₃₀Br₂O₃ 478.265	Not Available	1	Co-metabolite	Not Available
MMDBc0018394	Terpeptin	C₂₈H₄₀N₄O₃ 480.653	Not Available	1	Co-metabolite	Not Available

Microbe ID	Organism	Kindgom	Phylum	Oxygen preference	Energy production	Host and body site	Pathogenicity and disease	# Related metabolites
MMDBm0000001	Bacteroides fragills NCTC 9343	Not Available	Microspora	Nanaerobe	Not Available	Human Gut	Non-pathogenic	0
MMDBm0000002	Micromonospora aurantiaca ATCC 27029	Eubacteria	Actinobacteria	Aerobe	Polyisoprene rubber degrader	Human Gut	Non-pathogenic	812
MMDBm0000003	Acidaminococcus fermentans DSM 20731	Eubacteria	Firmicutes	Anaerobe	Not Available	Pig Human Gut	Pathogenic	675
MMDBm0000004	Acidaminococcus intestini RyC-MR95	Eubacteria	Firmicutes	Anaerobe	Asaccharolytic, glutamate is fermented	Human Gut	Pathogenic	580
MMDBm0000005	Acidovorax sp. KKS102	Eubacteria	Proteobacteria	Not Available	Hydrocarbon Degradation	Human Gut	Pathogenic	0
MMDBm0000006	Acinetobacter baumannii	Eubacteria	Proteobacteria	Aerobe	Prototrophic	Human Human Thigh Human Lower respiratory tract Human Lung Human Trachea Human Gingiva	Pathogenic	39
MMDBm0000007	Acinetobacter pittii ANC 4052	Eubacteria	Proteobacteria	Aerobe	Asaccharolytic	Human Gut Human Lower respiratory tract	Non-pathogenic	837
MMDBm0000008	Acinetobacter radioresistens NIPH 2130	Eubacteria	Proteobacteria	Aerobe	Asaccharolytic	Human Gut	Non-pathogenic	791
MMDBm0000009	Adlercreutzia equolifaciens DSM 19450	Eubacteria	Actinobacteria	Anaerobe	Asaccharolytic, nonfermentative	Human Gut	Pathogenic	553
MMDBm0000010	Aeromonas jandaei Riv2	Eubacteria	Proteobacteria	Facultative anaerobe	Saccharolytic, fermentative	Human Gut Human Large intestine	Non-pathogenic	847
MMDBm0000011	Aggregatibacter aphrophilus NJ8700	Eubacteria	Proteobacteria	Facultative	Respiratory	Human Human Gut Human Lung Human Oral cavity dental cary Human Ovary Human Sinus	Non-pathogenic	706
MMDBm0000012	Agrobacterium tumefaciens F2	Eubacteria	Proteobacteria	Aerobe	Respiratory	Human Gut	Non-pathogenic	858
MMDBm0000013	Akkermansia	Eubacteria	Verrucomicrobia	Anaerobic	Fermentative, Mucin-degrading, Decarboxylation (arginine decarboxylase), Alkaline phosphatase activity, Short chain fatty acid production, Interaction with gut epithelial cells, Anti-inflammatory, Propionate production, Vitamin b12 synthesis	Human Large intestine Human Duodenum	Pathogenic	0
MMDBm0000014	Akkermansia muciniphila	Eubacteria	Verrucomicrobia	Anaerobe	Saccharolytic, fermentative	Human Gut Human Human Large intestine Human Bladder	Pathogenic	149
MMDBm0000015	Akkermansia muciniphila ATCC BAA-835	Eubacteria	Verrucomicrobia	Anaerobe	Saccharolytic, fermentative	Human Human Gut Human Large intestine	Pathogenic	718
MMDBm0000016	Alcaligenes faecalis subsp. faecalis NBRC 13111	Eubacteria	Proteobacteria	Aerobe	Respiratory	Human Gut Human Lower respiratory tract	Non-pathogenic	807
MMDBm0000017	Alistipes	Eubacteria	Bacteroidetes	Anaerobic	Fermentative, Scfa producer, Putrefaction, Indole production, Histidine degradation, Gaba production, Sulfonolipid production, Anaerobic respiration, Sulfonolipid biosynthesis	Human Large intestine Human Bladder	Pathogenic	0
MMDBm0000018	Alistipes finegoldii DSM 17242	Eubacteria	Bacteroidetes	Anaerobe	Saccharolytic, fermentative	Human Gut Human Appendix	Pathogenic	646
MMDBm0000019	Alistipes shahii WAL 8301	Eubacteria	Bacteroidetes	Anaerobe	Saccharolytic, fermentative	Human Gut Human Appendix	Pathogenic	598
MMDBm0000020	Anaerococcus prevotii DSM 20548	Eubacteria	Firmicutes	Anaerobe	Not Available	Human Human Gut	Pathogenic	631
MMDBm0000021	Anaerostipes caccae	Eubacteria	Firmicutes	Anaerobe	Saccharolytic, fermentative, acetate and lactate converted to butyrate	Human Large intestine	Pathogenic	602
MMDBm0000022	Anaerostipes hadrus	Eubacteria	Firmicutes	Anaerobe	Saccharolytic, fermentative	Human Gut Human Large intestine	Pathogenic	42
MMDBm0000023	Arcobacter butzleri RM4018	Eubacteria	Proteobacteria	Aerobe	Non-fermentative, asaccharolytic	Human Human Gut	Non-pathogenic	665
MMDBm0000024	Bacillus altitudinis 41KF2b	Eubacteria	Firmicutes	Facultative anaerobe	Respiration or fermentation of carbohydrates and central metabolism intermediates	Human Gut	Non-pathogenic	836
MMDBm0000025	Bacillus amyloliquefaciens subsp. amyloliquefaciens DC-12	Eubacteria	Firmicutes	Aerobe	Respiration or fermentation of carbohydrates and central metabolism intermediates	Human Gut	Non-pathogenic	844

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