MiMeDB: Host and Site

Metabolites
Microbes

Metabolite ID	Name	Formula MW	Host & Biospecimen (status - Q; D; E; P)	# Related Microbes	Metabolite Type	Additional sources
MMDBc0032159	Œ≤-D-glucose 1-phosphate	C₅H₉O₉P 244.093	Not Available	1	Co-metabolite	Not Available
MMDBc0032130	Œ±-D-glucose 6-phosphate	C₆H₁₁O₉P 258.12	Not Available	1	Co-metabolite
MMDBc0033214	{[(2S,3S,4R)-2-amino-3,4-dihydroxyicosyl]oxy}phosphonic acid	C₂₀H₄₄NO₆P 425.5402	Not Available	1	Co-metabolite	Not Available
MMDBc0010383	[Val7]lichenysin G14	C₅₁H₉₀N₈O₁₂ 1007.325	Not Available	2	Co-metabolite	Not Available
MMDBc0004621	[Val7]lichenysin G13	C₅₀H₈₈N₈O₁₂ 993.298	Not Available	2	Co-metabolite	Not Available
MMDBc0055094	[N-(C-5-[deoxy-beta-D-glucosyl]-2,3-dihydroxybenzoyl)-L-serine]3	C₄₈H₅₈N₃O₃₁ 1172.983	Not Available	1	Co-metabolite	Not Available
MMDBc0055093	[N-(2,3-dihydroxybenzoyl)-L-seryl]2-N-(C-5-[deoxy-beta-D-glucosyl]-2,3-dihydroxybenzoyl)-L-serine	C₃₆H₃₈N₃O₂₁ 848.701	Not Available	1	Co-metabolite	Not Available
MMDBc0007112	[Ile2,4]lichenysin G15	C₅₄H₉₆N₈O₁₂ 1049.406	Not Available	1	Co-metabolite	Not Available
MMDBc0010966	[Ile2,4,7]Surfactin	C₅₂H₉₁N₇O₁₃ 1022.336	Not Available	5	Co-metabolite	Not Available
MMDBc0060490	[Bile acid]Cholyl_sulfate	C₂₄H₄₀O₈S 488.64	Not Available	0	Co-metabolite	Not Available
MMDBc0060489	[Bile acid]Cholyl_Succinic-anhydride	C₂₈H₄₄O₈ 508.652	Not Available	6	Co-metabolite	Not Available
MMDBc0055091	[alpha-D-GalNAc-(1->4)]4-alpha-D-GalNAc-(1->3)-alpha-D-diNAcBac-tri-trans,hepta-cis-undecaprenyl diphosphate	C₁₀₅H₁₇₁N₇O₃₆P₂ 2169.485	Not Available	1	Co-metabolite	Not Available
MMDBc0055090	[alpha-D-GalNAc-(1->4)]2-[beta-D-Glc-(1->3)]-[alpha-D-GalNAc-(1->4)]2-alpha-D-GalNAc-(1->3)-alpha-D-diNAcBac-tri-trans,hepta-cis-undecaprenyl diphosphate	C₁₁₁H₁₈₁N₇O₄₁P₂ 2331.626	Not Available	1	Co-metabolite	Not Available
MMDBc0055089	[5-(aminomethyl)furan-3-yl]methyl diphosphate	C₆H₉NO₈P₂ 285.086	Not Available	2	Co-metabolite	Not Available
MMDBc0055085	[(2R)-3,3,4-trimethyl-6-oxo-3,6-dihydro-1H-pyran-2-yl]acetyl-CoA	C₃₁H₄₄N₇O₁₉P₃S 943.71	Not Available	1	Co-metabolite	Not Available
MMDBc0055083	[(1S)-1-acetamidoethyl]phosphonic acid	C₄H₉NO₄P 166.093	Not Available	2	Co-metabolite	Not Available
MMDBc0055082	[(1R)-2,2,3-trimethyl-5-oxocyclopent-3-enyl]acetyl-CoA	C₃₁H₄₄N₇O₁₈P₃S 927.71	Not Available	1	Co-metabolite	Not Available
MMDBc0033032	zymosteryl palmitoleate	C₄₃H₇₂O₂ 621.0306	Not Available	1	Co-metabolite	Not Available
MMDBc0033027	zymosteryl oleate	C₄₅H₇₆O₂ 649.0837	Not Available	1	Co-metabolite	Not Available
MMDBc0033051	zymosterol intermediate 2	C₂₇H₄₂O 382.6218	Human Feces	12	Co-metabolite
MMDBc0033050	zymosterol intermediate 1c	C₂₉H₄₆O₂ 426.6743	Not Available	1	Co-metabolite	Not Available
MMDBc0033056	zymosterol intermediate 1b	C₂₈H₄₄O₂ 412.6478	Not Available	1	Co-metabolite	Not Available
MMDBc0033055	zymosterol intermediate 1a	C₂₈H₄₆O₂ 414.6636	Not Available	1	Co-metabolite	Not Available
MMDBc0033026	zymosterol	C₂₇H₄₄O 384.6377	Human Blood Human Adipose Tissue Human Liver	12	Co-metabolite
MMDBc0003576	Zwittermicin A	C₁₃H₂₈N₆O₈ 396.401	Not Available	1	Co-metabolite	Not Available

Microbe ID	Organism	Kindgom	Phylum	Oxygen preference	Energy production	Host and body site	Pathogenicity and disease	# Related metabolites
MMDBm0016086	[Ulocladium] sp.	Fungi	Ascomycota	Not Available	Not Available	Not Available	Non-pathogenic	7
MMDBm0803020	[Ruminococcus] torques ATCC 27756	Eubacteria	Firmicutes	Anaerobe	Saccharolytic, fermentative	Human Gut	Non-pathogenic	603
MMDBm0803018	[Ruminococcus] lactaris ATCC 29176	Eubacteria	Firmicutes	Anaerobe	Saccharolytic, fermentative	Human Gut	Non-pathogenic	616
MMDBm0803014	[Ruminococcus] gnavus ATCC 29149	Eubacteria	Firmicutes	Anaerobe	Saccharolytic, fermentative	Human Gut	Non-pathogenic	769
MMDBm0803009	[Ruminococcus] faecis JCM 15917	Eubacteria	Firmicutes	Not Available	Fermentative	Not Available	Non-pathogenic	0
MMDBm0053606	[Malbranchea] flavorosea	Fungi	Ascomycota	Not Available	Not Available	Not Available	Non-pathogenic	2
MMDBm0060696	[Hypocrea] muroiana	Fungi	Ascomycota	Aerobic	Not Available	Not Available	Non-pathogenic	11
MMDBm0570939	[Haemophilus] ducreyi	Eubacteria	Proteobacteria	Not Available	Not Available	Human Human Arm	Pathogenic	0
MMDBm0581026	[Flavobacterium] lutescens	Eubacteria	Proteobacteria	Not Available	Not Available	Not Available	Non-pathogenic	0
MMDBm0806096	[Eubacterium] siraeum DSM 15702	Eubacteria	Firmicutes	Anaerobe	Saccharolytic, fermentative	Human Gut	Non-pathogenic	541
MMDBm0806716	[Eubacterium] nodatum	Eubacteria	Firmicutes	Not Available	Not Available	Human Gingiva	Pathogenic	0
MMDBm0806714	[Eubacterium] minutum	Eubacteria	Firmicutes	Not Available	Not Available	Human Tongue Human Gingiva	Pathogenic	0
MMDBm0801642	[Eubacterium] cellulosolvens 6	Eubacteria	Firmicutes	Anaerobe	Saccharolytic, fermentative	Human Gut	Non-pathogenic	696
MMDBm0724261	[Collinsella] massiliensis	Eubacteria	Actinobacteria	Not Available	Not Available	Human Large intestine	Pathogenic	0
MMDBm0806095	[Clostridium] viride DSM 6836	Eubacteria	Firmicutes	Anaerobe	Non-saccharolytic	Human Gut	Non-pathogenic	652
MMDBm0802903	[Clostridium] symbiosum WAL-14673	Eubacteria	Firmicutes	Anaerobe	Saccharolytic, fermentative	Human Gut	Non-pathogenic	731
MMDBm0802902	[Clostridium] symbiosum WAL-14163	Eubacteria	Firmicutes	Anaerobe	Saccharolytic, fermentative	Human Gut	Non-pathogenic	724
MMDBm0802901	[Clostridium] symbiosum ATCC 14940	Eubacteria	Firmicutes	Anaerobe	Saccharolytic, fermentative	Human Gut	Non-pathogenic	765
MMDBm0806093	[Clostridium] sporosphaeroides DSM 1294	Eubacteria	Firmicutes	Facultative anaerobe	Saccharolytic, respiratory or fermentative	Human Gut	Non-pathogenic	661
MMDBm0808657	[Clostridium] spiroforme DSM 1552	Eubacteria	Firmicutes	Anaerobe	Saccharolytic, fermentative	Human Gut	Non-pathogenic	578
MMDBm0802899	[Clostridium] scindens ATCC 35704	Eubacteria	Firmicutes	Aerotolerant	Saccharolytic, fermentative	Human Gut	Non-pathogenic	714
MMDBm0808655	[Clostridium] saccharogumia DSM 17460	Eubacteria	Firmicutes	Anaerobe	Saccharolytic, fermentative	Human Gut	Non-pathogenic	657
MMDBm0806091	[Clostridium] methylpentosum DSM 5476	Eubacteria	Firmicutes	Anaerobe	Not Available	Human Gut	Non-pathogenic	379
MMDBm0802894	[Clostridium] methoxybenzovorans SR3	Eubacteria	Firmicutes	Anaerobe	Saccharolytic, fermentative, utilizes methoxybenzoic acid	Human Gut	Non-pathogenic	807
MMDBm0806090	[Clostridium] leptum DSM 753	Eubacteria	Firmicutes	Anaerobe	Few carbohydrates weakly fermented	Human Gut	Non-pathogenic	607

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