| MMDBm0000036 | Bacteroides caccae | Bacteria | Bacteroidetes | Human Feces | Microbial culture | Not Available |
| MMDBm0000038 | Bacteroides cellulosilyticus | Bacteria | Bacteroidetes | Human Feces | Microbial culture | Not Available |
| MMDBm0000042 | Bacteroides eggerthii | Bacteria | Bacteroidetes | Human Stool | Microbial culture | Not Available |
| MMDBm0000043 | Bacteroides fragilis | Bacteria | Bacteroidetes | Human Feces | Not Available | VMH |
| MMDBm0000044 | Bacteroides fragilis 3_1_12 | Bacteria | Bacteroidetes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0000045 | Bacteroides fragilis 638R | Bacteria | Bacteroidetes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0000046 | Bacteroides fragilis NCTC 9343 | Bacteria | Bacteroidetes | Human | Metabolic reconstruction | VMH |
| MMDBm0000047 | Bacteroides fragilis YCH46 | Bacteria | Bacteroidetes | Human | Metabolic reconstruction | VMH |
| MMDBm0000049 | Bacteroides ovatus | Bacteria | Bacteroidetes | Human Feces | Not Available | VMH |
| MMDBm0000052 | Bacteroides stercoris | Bacteria | Bacteroidetes | Human Feces | Microbial culture | Not Available |
| MMDBm0000053 | Bacteroides stercoris ATCC 43183 | Bacteria | Bacteroidetes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0000054 | Bacteroides thetaiotaomicron | Bacteria | Bacteroidetes | Human Feces | Not Available | VMH |
| MMDBm0000055 | Bacteroides thetaiotaomicron VPI-5482 | Bacteria | Bacteroidetes | Human | Metabolic reconstruction | VMH |
| MMDBm0000056 | Bacteroides vulgatus | Bacteria | Bacteroidetes | Human Feces | Not Available | VMH |
| MMDBm0000057 | Bacteroides vulgatus ATCC 8482 | Bacteria | Bacteroidetes | Human | Metabolic reconstruction | VMH |
| MMDBm0000231 | Parabacteroides distasonis | Bacteria | Bacteroidetes | Human Feces | Microbial culture | Not Available |
| MMDBm0000325 | Psychroflexus gondwanensis | Bacteria | Bacteroidetes | Not Available | Microbial culture | Not Available |
| MMDBm0000376 | Bacteroides uniformis | Bacteria | Bacteroidetes | Human Feces | Not Available | VMH |
| MMDBm0000404 | Flavobacterium johnsoniae | Bacteria | Bacteroidetes | Not Available | Microbial culture | Not Available |
| MMDBm0000614 | Capnocytophaga canimorsus | Bacteria | Bacteroidetes | Human Saliva | Microbial culture | Not Available |
| MMDBm0000615 | Capnocytophaga cynodegmi | Bacteria | Bacteroidetes | Not Available | Microbial culture | Not Available |
| MMDBm0000710 | Parabacteroides merdae | Bacteria | Bacteroidetes | Human Feces | Microbial culture | Not Available |
| MMDBm0000731 | Flavobacterium branchiophilum | Bacteria | Bacteroidetes | Not Available | Microbial culture | Not Available |
| MMDBm0000841 | Bacteroides coprosuis | Bacteria | Bacteroidetes | Not Available | Microbial culture | Not Available |
| MMDBm0000859 | Dysgonomonas mossii | Bacteria | Bacteroidetes | Not Available | Microbial culture | Not Available |
