MiMeDB: Bacteroides fragilis 3_1

Microbe Identification

Microbe name

Bacteroides fragilis 3_1_12

NCBI Taxonomy ID

457424

Microbe Taxonomy

Superkingdom

Bacteria

Kingdom

Eubacteria

Phylum

Bacteroidetes

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Bacteroides

Species

fragilis

Strain

Microbe Properties

Gram staining properties

Positive

Shape

Bacilli

Mobility

Flagellar presence

Number of membranes

Oxygen preference

Anaerobe

Optimal temperature

Temperature range

Mesophilic

Habitat

HostAssociated

Biotic relationship

Free living

Cell arrangement

Singles

Sporulation

Not Available

Metabolism

Saccharolytic, fermentative

Energy source

Chemoorganotroph

Host and Biospecimens

Host	Body site	Biospecimen	Details	Data Source	Reference
Human	Gut	Feces	Unknown	VMH	30371894

Health Effects

Host	Related Health Condition	Biospecimen	Microbal response/effect	Data Source	Reference

Related Metabolites

Metabolic Reactions

Reactions

Reaction ID	Precursor	Product	Reaction Type	Data Source	Reference
MMDBr0007226	(R)-2,3-Dihydroxy-3-methylpentanoate	(R)-3-Hydroxy-3-methyl-2-oxopentanoate	Not Available	VMH	30371894
MMDBr0007227	2',3'-Cyclic UMP	3'-UMP	Not Available	VMH	30371894
MMDBr0006985	LL-2,6-Diaminoheptanedioate	L-Glutamic acid	Not Available	VMH	30371894
MMDBr0007038	3-Carboxy-3-hydroxy-4-methylpentanoate	alpha-Ketoisovaleric acid	Not Available	VMH	30371894
MMDBr0008045	4-Hydroxybenzoic acid	4-Hydroxybenzoic acid	Not Available	VMH	30371894
MMDBr0007683	5-Amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate	5-Aminoimidazole ribonucleotide	Not Available	VMH	30371894
MMDBr0007230	D-Ribulose 5-phosphate	D-Arabinose 5-phosphate	Not Available	VMH	30371894
MMDBr0008454	Allysine	2,3,4,5-Tetrahydro-2-pyridinecarboxylic acid	Not Available	VMH	30371894
MMDBr0008139	gamma-Aminobutyric acid	gamma-Aminobutyric acid	Not Available	VMH	30371894
MMDBr0006891	Adenosyl cobinamide phosphate	Adenosine-GDP-cobinamide	Not Available	VMH	30371894
MMDBr0007614	Hydrogen carbonate	Malonyl-CoA	Not Available	VMH	30371894
MMDBr0010968	N-Acetylgalactosamine	N-Acetylgalactosamine	Not Available	VMH	30371894
MMDBr0008066	N-Acetyl-D-glucosamine	N-Acetylmannosamine	Not Available	VMH	30371894
MMDBr0000175	N-Acetyl-D-glucosamine	N-Acetyl-D-Glucosamine 6-Phosphate	Not Available	VMH	10824116
MMDBr0008269	N-Acetyl-D-glucosamine	N-Acetyl-D-glucosamine	Not Available	VMH	30371894
MMDBr0007042	N-Acetylglutamic acid	N-Acetyl-L-glutamyl 5-phosphate	Not Available	VMH	30371894
MMDBr0007043	L-Glutamic acid	N-Acetylglutamic acid	Not Available	VMH	30371894
MMDBr0007240	Acetic acid	Acetyl phosphate	Not Available	VMH	30371894
MMDBr0008059	N-Acetylneuraminic acid	N-Acetylneuraminic acid	Not Available	VMH	30371894
MMDBr0008468	N-Acetylneuraminic acid	N-Acetylneuraminic acid	Not Available	VMH	30371894
MMDBr0006894	N-Acetylneuraminic acid	N-Acetylmannosamine	Not Available	VMH	30371894
MMDBr0008261	N2-Acetylornithine	N-Acetyl-L-citrulline	Not Available	VMH	30371894
MMDBr0007698	N2-Acetylornithine	Acetic acid	Not Available	VMH	30371894
MMDBr0007241	Citric acid	Isocitric acid	Not Available	VMH	30371894
MMDBr0007044	N2-Acetylornithine	N-Acetyl-L-glutamate 5-semialdehyde	Not Available	VMH	30371894
MMDBr0008183	(R)-acetoin	Acetaldehyde	Not Available	VMH	30371894
MMDBr0000209	Acetic acid	Acetic acid	Not Available	VMH	9651205
MMDBr0007243	4-Amino-4-deoxychorismate	4-Aminobenzoate	Not Available	VMH	30371894
MMDBr0006898	Adenosyl cobyrinate a,c diamide	Adenosyl cobinamide	Not Available	VMH	30371894
MMDBr0006899	Adenosyl cobyrinate a,c diamide	Adenosyl cobinamide phosphate	Not Available	VMH	30371894
MMDBr0007244	Chorismate	4-Amino-4-deoxychorismate	Not Available	VMH	30371894
MMDBr0006900	Adenosyl cobyrinate diamide	Adenosyl cobyrinate a,c diamide	Not Available	VMH	30371894
MMDBr0010873	Thymidine 5'-triphosphate	dTDP	Not Available	VMH	30371894
MMDBr0010874	Deoxyuridine triphosphate	dUDP	Not Available	VMH	30371894
MMDBr0000219	Guanosine triphosphate	Guanosine diphosphate	Not Available	VMH	9434148
MMDBr0010875	Cytidine triphosphate	CDP	Not Available	VMH	30371894
MMDBr0010877	dCTP	dCDP	Not Available	VMH	30371894
MMDBr0007247	Adenosine	Adenosine	Not Available	VMH	30371894
MMDBr0006901	Adenosyl cobinamide	Adenosyl cobinamide phosphate	Not Available	VMH	30371894
MMDBr0006902	Adenosyl cobinamide	Adenosyl cobinamide phosphate	Not Available	VMH	30371894
MMDBr0007701	Adenosylcobalamin	Adenosylcobalamin	Not Available	VMH	30371894
MMDBr0007653	Adenosine diphosphate ribose	D-Ribose-5-phosphate	Not Available	VMH	30371894
MMDBr0000240	Adenylylselenate	3'-Phosphoadenylylselenate	Not Available	VMH	10679223
MMDBr0000241	Adenosine phosphosulfate	Phosphoadenosine phosphosulfate	Not Available	VMH	11931637; 12716056
MMDBr0007249	Adenylsuccinic acid	Fumaric acid	Not Available	VMH	30371894
MMDBr0007250	SAICAR	AICAR	Not Available	VMH	30371894
MMDBr0007251	L-Aspartic acid	Adenylsuccinic acid	Not Available	VMH	30371894
MMDBr0007702	Ciliatine	L-Alanine	Not Available	VMH	30371894
MMDBr0007703	N-Acetyl-D-Glucosamine 6-Phosphate	Acetic acid	Not Available	VMH	30371894
MMDBr0007172	Agmatine	N-Carbamoylputrescine	Not Available	VMH	30371894
MMDBr0007252	ADP-D-Glycero-D-manno-heptose	ADP-L-Glycero-D-manno-heptose	Not Available	VMH	30371894
MMDBr0007047	N-Acetyl-L-glutamate 5-semialdehyde	N-Acetyl-L-glutamyl 5-phosphate	Not Available	VMH	30371894
MMDBr0008137	S-Adenosylhomocysteine	Adenosine	Not Available	VMH	30371894
MMDBr0007705	S-Adenosylhomocysteine	Adenine	Not Available	VMH	30371894
MMDBr0008065	5-Aminoimidazole ribonucleotide	4-Amino-5-hydroxymethyl-2-methylpyrimidine	Not Available	VMH	30371894
MMDBr0007048	O-Acetyl-L-homoserine	Acetic acid	Not Available	VMH	30371894
MMDBr0007706	10-Formyltetrahydrofolic acid	Phosphoribosyl formamidocarboxamide	Not Available	VMH	30371894
MMDBr0007707	5-Aminoimidazole ribonucleotide	5-Amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate	Not Available	VMH	30371894
MMDBr0007674	Dihydroneopterin triphosphate	Dihydroneopterin	Not Available	VMH	30371894
MMDBr0007253	D-Alanine	D-Alanyl-D-alanine	Not Available	VMH	30371894
MMDBr0007254	L-Alanyl-L-Glutamate	L-Alanine	Not Available	VMH	30371894
MMDBr0007256	Carnosine	L-Alanine	Not Available	VMH	30371894
MMDBr0007258	L-Alanine	D-Alanine	Not Available	VMH	30371894
MMDBr0007665	Methanol	Formaldehyde	Not Available	VMH	30371894
MMDBr0007259	D-Glyceraldehyde	Glycerol	Not Available	VMH	30371894
MMDBr0007260	Ethanol	Acetaldehyde	Not Available	VMH	30371894
MMDBr0007666	Formaldehyde	Formic acid	Not Available	VMH	30371894
MMDBr0000288	Dihydroxyacetone phosphate	Dihydroxyacetone	Not Available	VMH	3042787
MMDBr0008299	5-Hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate	Allantoin	Not Available	VMH	30371894
MMDBr0007714	D-Maltose	D-Glucose	Not Available	VMH	30371894
MMDBr0007715	D-Maltose	D-Glucose	Not Available	VMH	30371894
MMDBr0007716	D-Maltose	D-Glucose	Not Available	VMH	30371894
MMDBr0007717	D-Maltose	D-Glucose	Not Available	VMH	30371894
MMDBr0006904	N-Acetyl-D-mannosamine 6-phosphate	N-Acetyl-D-Glucosamine 6-Phosphate	Not Available	VMH	30371894
MMDBr0007718	N-Acetylmannosamine	N-Acetyl-D-mannosamine 6-phosphate	Not Available	VMH	30371894
MMDBr0007261	8-Amino-7-oxononanoate	S-Adenosyl-4-methylthio-2-oxobutanoate	Not Available	VMH	30371894
MMDBr0008520	2-Demethylmenaquinone 8	S-Adenosylhomocysteine	Not Available	VMH	30371894
MMDBr0008300	2-Amino-3-oxo-4-phosphonooxybutyrate	3-Amino-2-oxopropyl phosphate	Not Available	VMH	30371894
MMDBr0008043	5-Aminoimidazole ribonucleotide	4-Amino-2-methyl-5-phosphomethylpyrimidine	Not Available	VMH	30371894
MMDBr0007262	Cysteinylglycine	L-Cysteine	Not Available	VMH	30371894
MMDBr0000306	Starch, Structure 1 (1,6-{7[1,4-Glc], 4[1,4-Glc]})	D-Glucose	Not Available	VMH	30371894
MMDBr0008370	Amylopectin	Maltotriose	Not Available	VMH	30371894
MMDBr0007263	2-Aminobenzoic acid	N-(5-Phospho-D-ribosyl)anthranilate	Not Available	VMH	30371894
MMDBr0007264	Chorismate	2-Aminobenzoic acid	Not Available	VMH	30371894
MMDBr0007265	Chorismate	2-Aminobenzoic acid	Not Available	VMH	30371894
MMDBr0007266	L-2-Amino-3-oxobutanoic acid	Aminoacetone	Not Available	VMH	30371894
MMDBr0008301	2-Keto-6-aminocaproate	1-Piperideine-2-carboxylic acid	Not Available	VMH	30371894
MMDBr0007267	L-Alanine	8-Amino-7-oxononanoate	Not Available	VMH	30371894
MMDBr0007050	L-Arabinose	L-Arabinose	Not Available	VMH	30371894
MMDBr0008088	L-Arabinose	L-Arabinose	Not Available	VMH	30371894
MMDBr0007268	L-Arginine	Agmatine	Not Available	VMH	30371894
MMDBr0007722	Argininosuccinic acid	L-Arginine	Not Available	VMH	30371894
MMDBr0007051	L-Aspartic acid	Argininosuccinic acid	Not Available	VMH	30371894
MMDBr0007723	L-Arginine	L-Arginine	Not Available	VMH	30371894
MMDBr0008262	Arsenobetaine	Arsenobetaine	Not Available	VMH	30371894
MMDBr0000342	L-Aspartic acid	L-Asparagine	Not Available	VMH	2564390; 2886907
MMDBr0006906	L-Aspartic acid	L-Asparagine	Not Available	VMH	30371894
MMDBr0007270	L-Asparagine	L-Asparagine	Not Available	VMH	30371894
MMDBr0007271	L-Aspartic acid	beta-Alanine	Not Available	VMH	30371894
MMDBr0007272	L-Aspartic acid	Ureidosuccinic acid	Not Available	VMH	30371894
MMDBr0007724	L-Aspartic acid	Hydrogen peroxide	Not Available	VMH	30371894
MMDBr0008050	L-Aspartic acid	Iminoaspartate	Not Available	VMH	30371894
MMDBr0007725	L-Aspartic acid	Hydrogen peroxide	Not Available	VMH	30371894
MMDBr0007619	L-Aspartic acid	Reduced FMN	Not Available	VMH	30371894
MMDBr0007273	L-Aspartic acid	Fumaric acid	Not Available	VMH	30371894
MMDBr0007274	Oxoglutaric acid	L-Glutamic acid	Not Available	VMH	30371894
MMDBr0007052	Phosphoribosyl pyrophosphate	1-(5-phosphoribosyl)-ATP	Not Available	VMH	30371894
MMDBr0007277	Biotinyl-5'-AMP	Biotin	Not Available	VMH	30371894
MMDBr0007053	Cellobiose	D-Glucose	Not Available	VMH	30371894
MMDBr0008067	Biotin	Biotin	Not Available	VMH	30371894
MMDBr0007279	S-Adenosylmethionine	Biotin	Not Available	VMH	30371894
MMDBr0008186	Butyric acid	Butanoyl phosphate	Not Available	VMH	30371894
MMDBr0007281	Calcium	Calcium	Not Available	VMH	30371894
MMDBr0006909	Cobinamide	Adenosyl cobinamide	Not Available	VMH	30371894
MMDBr0007734	Cob(I)alamin	Cob(I)alamin	Not Available	VMH	30371894
MMDBr0007736	Cob(II)alamin	Cob(II)alamin	Not Available	VMH	30371894
MMDBr0006910	Cob(I)alamin	Adenosylcobalamin	Not Available	VMH	30371894
MMDBr0007282	L-Glutamine	Carbamoylphosphate	Not Available	VMH	30371894
MMDBr0007283	Cadmium	Cadmium	Not Available	VMH	30371894
MMDBr0007054	Cadmium	Cadmium	Not Available	VMH	30371894
MMDBr0007284	CMP-3-Deoxy-D-manno-octulosonate	Cytidine monophosphate	Not Available	VMH	30371894
MMDBr0007285	Cysteinylglycine	Cysteinylglycine	Not Available	VMH	30371894
MMDBr0007738	Chorismate	Prephenate	Not Available	VMH	30371894
MMDBr0007286	5-O-(1-Carboxyvinyl)-3-phosphoshikimate	Chorismate	Not Available	VMH	30371894
MMDBr0007739	Citric acid	Acetic acid	Not Available	VMH	30371894
MMDBr0000506	N-Acetylneuraminic acid	Cytidine 5'-monophosphate-N-acetylneuraminic acid	Not Available	VMH	9689047
MMDBr0007288	Cobalt	Cobalt	Not Available	VMH	30371894
MMDBr0006912	S-Adenosylmethionine	S-Adenosylhomocysteine	Not Available	VMH	30371894
MMDBr0006913	S-Adenosylmethionine	S-Adenosylhomocysteine	Not Available	VMH	30371894
MMDBr0006914	S-Adenosylmethionine	S-Adenosylhomocysteine	Not Available	VMH	30371894
MMDBr0006915	S-Adenosylmethionine	Acetaldehyde	Not Available	VMH	30371894
MMDBr0006916	S-Adenosylmethionine	S-Adenosylhomocysteine	Not Available	VMH	30371894
MMDBr0006917	Cobalt-precorrin 6	Cobalt-dihydro-precorrin 6	Not Available	VMH	30371894
MMDBr0006918	Cobalt-precorrin 8	Cobyrinate	Not Available	VMH	30371894
MMDBr0007182	S-Adenosylmethionine	5'-Deoxyadenosine	Not Available	VMH	30371894
MMDBr0008263	Crotonobetaine	Crotonobetaine	Not Available	VMH	30371894
MMDBr0007290	Uridine triphosphate	Cytidine triphosphate	Not Available	VMH	30371894
MMDBr0007291	L-Glutamine	Cytidine triphosphate	Not Available	VMH	30371894
MMDBr0006919	Cob(I)yrinate a,c diamide	Adenosyl cobyrinate diamide	Not Available	VMH	30371894
MMDBr0006920	Cobyrinate	Cob(II)yrinate a,c diamide	Not Available	VMH	30371894
MMDBr0006921	O-Acetyl-L-serine	Acetic acid	Not Available	VMH	30371894
MMDBr0007293	L-Cystathionine	2-Ketobutyric acid	Not Available	VMH	30371894
MMDBr0007294	Homocysteine	L-Cystathionine	Not Available	VMH	30371894
MMDBr0007625	L-Cysteine	L-Cysteine	Not Available	VMH	30371894
MMDBr0007184	Menaquinol 8	MK-8	Not Available	VMH	30371894
MMDBr0000574	Cytidine	Uridine	Not Available	VMH	14744791; 15087440; 7923172; 8001985; 8422236
MMDBr0000575	Cytidine	Cytidine monophosphate	Not Available	VMH	30371894
MMDBr0007742	Cytidine	Cytidine monophosphate	Not Available	VMH	30371894
MMDBr0006922	Cytidine	Cytidine monophosphate	Not Available	VMH	30371894
MMDBr0007743	Cytidine	Cytidine monophosphate	Not Available	VMH	30371894
MMDBr0007295	Cytidine	Cytidine	Not Available	VMH	30371894
MMDBr0007744	Cytidine monophosphate	CDP	Not Available	VMH	30371894
MMDBr0007745	dCMP	dCDP	Not Available	VMH	30371894
MMDBr0007296	Copper	Copper	Not Available	VMH	30371894
MMDBr0007297	Copper	Copper	Not Available	VMH	30371894
MMDBr0007298	Deoxyadenosine	Deoxyadenosine	Not Available	VMH	30371894
MMDBr0007299	Meso-2,6-Diaminoheptanedioate	L-Lysine	Not Available	VMH	30371894
MMDBr0007300	LL-2,6-Diaminoheptanedioate	Meso-2,6-Diaminoheptanedioate	Not Available	VMH	30371894
MMDBr0007301	7,8-Diaminononanoate	Dethiobiotin	Not Available	VMH	30371894
MMDBr0008069	dCMP	dUMP	Not Available	VMH	30371894
MMDBr0000638	Deoxycytidine	Deoxyuridine	Not Available	VMH	14744791; 15087440; 7923172; 8001985; 8422236
MMDBr0007186	Deoxycytidine	Deoxycytidine	Not Available	VMH	30371894
MMDBr0008420	Dodecanoic acid	Dodecanoic acid	Not Available	VMH	30371894
MMDBr0007304	D-Erythrose 4-phosphate	2-Dehydro-3-deoxy-D-arabino-heptonate 7-phosphate	Not Available	VMH	30371894
MMDBr0007305	4-Hydroxy-2-oxoglutaric acid	Glyoxylic acid	Not Available	VMH	30371894
MMDBr0007187	Deoxyguanosine	Deoxyguanosine	Not Available	VMH	30371894
MMDBr0007747	(R)-2,3-Dihydroxy-3-methylbutanoate	alpha-Ketoisovaleric acid	Not Available	VMH	30371894
MMDBr0007748	(R)-2,3-Dihydroxy-3-methylpentanoate	3-Methyl-2-oxovaleric acid	Not Available	VMH	30371894
MMDBr0007307	2,3-Dihydrodipicolinate	2,3,4,5-Tetrahydrodipicolinate	Not Available	VMH	30371894
MMDBr0007308	Dihydrofolic acid	Folic acid	Not Available	VMH	30371894
MMDBr0007309	Dihydrofolic acid	Tetrahydrofolic acid	Not Available	VMH	30371894
MMDBr0007310	Dihydropteroate	Dihydrofolic acid	Not Available	VMH	30371894
MMDBr0007615	Dihydroneopterin	6-Hydroxymethyl dihydropterin	Not Available	VMH	30371894
MMDBr0007311	4,5-Dihydroorotic acid	Menaquinol 8	Not Available	VMH	30371894
MMDBr0007657	4,5-Dihydroorotic acid	Orotic acid	Not Available	VMH	30371894
MMDBr0007312	4,5-Dihydroorotic acid	Hydrogen peroxide	Not Available	VMH	30371894
MMDBr0007313	4,5-Dihydroorotic acid	Ureidosuccinic acid	Not Available	VMH	30371894
MMDBr0007617	4-Aminobenzoate	Dihydropteroate	Not Available	VMH	30371894
MMDBr0007315	2-Dehydro-3-deoxy-D-arabino-heptonate 7-phosphate	3-Dehydroquinate	Not Available	VMH	30371894
MMDBr0007188	Deoxyinosine	Deoxyinosine	Not Available	VMH	30371894
MMDBr0007316	Dimethylallylpyrophosphate	Geranyl-PP	Not Available	VMH	30371894
MMDBr0007317	1-Hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate	Dimethylallylpyrophosphate	Not Available	VMH	30371894
MMDBr0007318	1-Hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate	Dimethylallylpyrophosphate	Not Available	VMH	30371894
MMDBr0007322	2-Dehydropantoate	(R)-Pantoate	Not Available	VMH	30371894
MMDBr0007754	Deoxyribose	Deoxyribose 5-phosphate	Not Available	VMH	30371894
MMDBr0007756	Deoxyribose 5-phosphate	Acetaldehyde	Not Available	VMH	30371894
MMDBr0007323	5-Thymidylic acid	dTDP	Not Available	VMH	30371894
MMDBr0000835	Deoxyuridine	dUMP	Not Available	VMH	12535661; 9342341
MMDBr0007324	Deoxyuridine	Deoxyribose 1-phosphate	Not Available	VMH	30371894
MMDBr0007189	Deoxyuridine	Deoxyuridine	Not Available	VMH	30371894
MMDBr0007325	Deoxyuridine triphosphate	dUMP	Not Available	VMH	30371894
MMDBr0007326	Glyceraldehyde 3-phosphate	1-Deoxy-D-xylulose 5-phosphate	Not Available	VMH	30371894
MMDBr0006926	Ferricytochrome c	Ferrocytochrome c	Not Available	VMH	30371894
MMDBr0000688	D-Lactic acid	D-Lactic acid	Not Available	VMH	10493836; 10510291; 11101640; 12739169; 7835905; 8476015; 9425115; 9508842; 9649795; 9786900; 9824713
MMDBr0007327	D-Erythrose 4-phosphate	4-Phospho-D-erythronate	Not Available	VMH	30371894
MMDBr0007328	Oxoglutaric acid	4-Hydroxy-2-oxoglutaric acid	Not Available	VMH	30371894
MMDBr0007329	2-Phospho-D-glyceric acid	Phosphoenolpyruvic acid	Not Available	VMH	30371894
MMDBr0007802	Myristic acid	Tetradecanoyl-CoA	Not Available	VMH	30371894
MMDBr0007803	Palmitic acid	Palmityl-CoA	Not Available	VMH	30371894
MMDBr0007804	Palmitoleic acid	Palmitoleyl-CoA	Not Available	VMH	30371894
MMDBr0007805	Stearic acid	Stearoyl-CoA	Not Available	VMH	30371894
MMDBr0007806	Oleic acid	oleoyl-CoA	Not Available	VMH	30371894
MMDBr0007396	Fructose 1,6-bisphosphate	Dihydroxyacetone phosphate	Not Available	VMH	30371894
MMDBr0007397	Fructose 1-phosphate	Dihydroxyacetone phosphate	Not Available	VMH	30371894
MMDBr0007398	Sedoheptulose 1,7-bisphosphate	Dihydroxyacetone phosphate	Not Available	VMH	30371894
MMDBr0007399	Fructose 1,6-bisphosphate	Fructose 6-phosphate	Not Available	VMH	30371894
MMDBr0007807	L-Fucose	L-Fuculose	Not Available	VMH	30371894
MMDBr0007808	L-Fuculose	L-Fuculose 1-phosphate	Not Available	VMH	30371894
MMDBr0007809	L-Fuculose 1-phosphate	Dihydroxyacetone phosphate	Not Available	VMH	30371894
MMDBr0007400	Protoporphyrin IX	Heme	Not Available	VMH	30371894
MMDBr0006933	Citric acid	Citric acid	Not Available	VMH	30371894
MMDBr0007060	Flavin mononucleotide	Reduced FMN	Not Available	VMH	30371894
MMDBr0008128	5-Formiminotetrahydrofolic acid	5,10-Methenyltetrahydrofolic acid	Not Available	VMH	30371894
MMDBr0007811	Formic acid	Formic acid	Not Available	VMH	30371894
MMDBr0007618	L-Glutamic acid	Pentaglutamyl Folate (Thf)	Not Available	VMH	30371894
MMDBr0007405	10-Formyltetrahydrofolic acid	10-Formyltetrahydrofolate-[Glu](5)	Not Available	VMH	30371894
MMDBr0007406	L-Glutamic acid	Tetrahydrofolyl-[Glu](2)	Not Available	VMH	30371894
MMDBr0007407	Fumaric acid	MK-8	Not Available	VMH	30371894
MMDBr0007408	2-Demethylmenaquinol 8	2-Demethylmenaquinone 8	Not Available	VMH	30371894
MMDBr0007164	D-Fructose	D-Fructose	Not Available	VMH	30371894
MMDBr0007411	Folinic acid	5,10-Methenyltetrahydrofolic acid	Not Available	VMH	30371894
MMDBr0008072	Formic acid	10-Formyltetrahydrofolic acid	Not Available	VMH	30371894
MMDBr0012666	L-Fucose	L-Fucose	Not Available	VMH	30371894
MMDBr0007412	Fumaric acid	(S)-malate(2-)	Not Available	VMH	30371894
MMDBr0007413	D-Glucosamine 1-phosphate	N-Acetyl-glucosamine 1-phosphate	Not Available	VMH	30371894
MMDBr0007813	Cytidine triphosphate	CDPglucose	Not Available	VMH	30371894
MMDBr0007815	Thymidine 5'-triphosphate	dTDP-D-Glucose	Not Available	VMH	30371894
MMDBr0007414	Glycerol 3-phosphate	Dihydroxyacetone phosphate	Not Available	VMH	30371894
MMDBr0007415	Glycerol 3-phosphate	Dihydroxyacetone phosphate	Not Available	VMH	30371894
MMDBr0007416	L-Glutamic-gamma-semialdehyde	L-D-1-Pyrroline-5-carboxylic acid	Not Available	VMH	30371894
MMDBr0007061	L-Glutamic acid 5-phosphate	L-Glutamic-gamma-semialdehyde	Not Available	VMH	30371894
MMDBr0007417	beta-D-Glucose 6-phosphate	6-Phosphonoglucono-D-lactone	Not Available	VMH	30371894
MMDBr0007819	Glucosamine 6-phosphate	Fructose 6-phosphate	Not Available	VMH	30371894
MMDBr0007418	Glucose 6-phosphate	6-Phosphonoglucono-D-lactone	Not Available	VMH	30371894
MMDBr0007419	Glucose 6-phosphate	beta-D-Glucose 6-phosphate	Not Available	VMH	30371894
MMDBr0007420	beta-D-Glucose 6-phosphate	Fructose 6-phosphate	Not Available	VMH	30371894
MMDBr0007822	D-Galactose	Galactose 1-phosphate	Not Available	VMH	30371894
MMDBr0007062	TG(18:4(6Z,9Z,12Z,15Z)/18:1(9Z)/20:5(5Z,8Z,11Z,14Z,17Z))	D-Galactose	Not Available	VMH	30371894
MMDBr0007823	Galactose 1-phosphate	Uridine diphosphategalactose	Not Available	VMH	30371894
MMDBr0007824	D-Galacturonate	D-Galacturonate	Not Available	VMH	30371894
MMDBr0007825	D-Galactose	D-Galactose	Not Available	VMH	30371894
MMDBr0001267	D-Galactose	D-Galactose	Not Available	VMH	10421229; 10821868; 10860996; 11247674; 11592815; 11882499; 12135767; 12750891; 1701966; 2182619; 3103217; 3170580; 3399500; 3839598; 7926364; 8504756; 9230074; 9770484
MMDBr0007422	D-Galactose	D-Galactose	Not Available	VMH	30371894
MMDBr0008057	Glucosamine	Glucosamine	Not Available	VMH	30371894
MMDBr0007423	Glyceraldehyde 3-phosphate	Glyceric acid 1,3-biphosphate	Not Available	VMH	30371894
MMDBr0006939	10-Formyltetrahydrofolic acid	5'-Phosphoribosyl-N-formylglycineamide	Not Available	VMH	30371894
MMDBr0007063	Formic acid	5'-Phosphoribosyl-N-formylglycineamide	Not Available	VMH	30371894
MMDBr0007669	Glycolaldehyde	Glycolic acid	Not Available	VMH	30371894
MMDBr0008364	Glycolaldehyde	Glycolaldehyde	Not Available	VMH	30371894
MMDBr0007424	Fructose 6-phosphate	Glucosamine 6-phosphate	Not Available	VMH	30371894
MMDBr0001281	GDP-4-Dehydro-6-deoxy-D-mannose	GDP-L-Fucose	Not Available	VMH	30371894
MMDBr0007427	L-Serine	Glycine	Not Available	VMH	30371894
MMDBr0007428	Guanosine monophosphate	Guanosine diphosphate	Not Available	VMH	30371894
MMDBr0007429	Deoxyadenosine triphosphate	Guanosine diphosphate	Not Available	VMH	30371894
MMDBr0007163	D-Glucuronic acid	D-Glucuronic acid	Not Available	VMH	30371894
MMDBr0007065	D-Glucose	D-Glucose	Not Available	VMH	30371894
MMDBr0007430	L-Glutamic acid	L-Glutamine	Not Available	VMH	30371894
MMDBr0007067	L-Glutamic acid	L-Glutamic acid 5-phosphate	Not Available	VMH	30371894
MMDBr0001335	L-Cysteine	gamma-Glutamylcysteine	Not Available	VMH	30371894
MMDBr0001336	L-Glutamic acid	gamma-Aminobutyric acid	Not Available	VMH	30371894
MMDBr0006942	L-Glutamic acid	Oxoglutaric acid	Not Available	VMH	30371894
MMDBr0007431	L-Glutamic acid	Oxoglutaric acid	Not Available	VMH	30371894
MMDBr0006943	5-Formiminotetrahydrofolic acid	Formiminoglutamic acid	Not Available	VMH	30371894
MMDBr0006944	L-Glutamine	L-Glutamic acid	Not Available	VMH	30371894
MMDBr0007068	L-Glutamic acid	Oxoglutaric acid	Not Available	VMH	30371894
MMDBr0007833	L-Glutamine	L-Glutamic acid	Not Available	VMH	30371894
MMDBr0007432	D-Glutamate	L-Glutamic acid	Not Available	VMH	30371894
MMDBr0008462	Oxoglutaric acid	L-Glutamic acid	Not Available	VMH	30371894
MMDBr0007671	Glyoxylic acid	2-Hydroxy-3-oxopropanoate	Not Available	VMH	30371894
MMDBr0007434	Glycyl-L-asparagine	L-Asparagine	Not Available	VMH	30371894
MMDBr0007436	Glycyl-L-aspartate	L-Aspartic acid	Not Available	VMH	30371894
MMDBr0007838	Glycine	L-2-Amino-3-oxobutanoic acid	Not Available	VMH	30371894
MMDBr0007194	Betaine	Betaine	Not Available	VMH	30371894
MMDBr0007841	Glycerol	Dihydroxyacetone	Not Available	VMH	30371894
MMDBr0007670	Glycolic acid	Glyoxylic acid	Not Available	VMH	30371894
MMDBr0007438	Glycyl-L-glutamine	L-Glutamine	Not Available	VMH	30371894
MMDBr0007440	Glycyl-L-glutamate	L-Glutamic acid	Not Available	VMH	30371894
MMDBr0007442	Glycylleucine	Glycine	Not Available	VMH	30371894
MMDBr0007444	Glycyl-L-methionine	Glycine	Not Available	VMH	30371894
MMDBr0007446	Glycyl-Phenylalanine	Glycine	Not Available	VMH	30371894
MMDBr0007448	Glycylproline	Glycine	Not Available	VMH	30371894
MMDBr0007450	Glycyl-L-tyrosine	Glycine	Not Available	VMH	30371894
MMDBr0007623	Glycine	Glycine	Not Available	VMH	30371894
MMDBr0007453	D-Glycero-D-manno-heptose 1-phosphate	ADP-D-Glycero-D-manno-heptose	Not Available	VMH	30371894
MMDBr0007454	D-Glycero-D-manno-heptose 7-phosphate	D-Glycero-D-manno-heptose 1,7-bisphosphate	Not Available	VMH	30371894
MMDBr0007455	D-Glycero-D-manno-heptose 1,7-bisphosphate	D-Glycero-D-manno-heptose 1-phosphate	Not Available	VMH	30371894
MMDBr0007457	L-Glutamine	L-Glutamic acid	Not Available	VMH	30371894
MMDBr0007845	6-Phosphogluconic acid	D-Ribulose 5-phosphate	Not Available	VMH	30371894
MMDBr0007846	Glycerophosphocholine	Choline	Not Available	VMH	30371894
MMDBr0007847	sn-glycero-3-phosphoethanolamine	Ethanolamine	Not Available	VMH	30371894
MMDBr0007848	Glycerophosphoglycerol	Glycerol	Not Available	VMH	30371894
MMDBr0007458	Geranyl-PP	Farnesyl pyrophosphate	Not Available	VMH	30371894
MMDBr0005655	Guanosine	Guanosine	Not Available	VMH	30371894
MMDBr0001389	gamma-Glutamylcysteine	Glutathione	Not Available	VMH	30371894
MMDBr0007459	Guanosine triphosphate	Dihydroneopterin triphosphate	Not Available	VMH	30371894
MMDBr0007460	Guanine	Guanosine monophosphate	Not Available	VMH	30371894
MMDBr0007853	D-Galacturonate	D-Tagaturonate	Not Available	VMH	30371894
MMDBr0007023	Hydrogen sulfide	Hydrogen sulfide	Not Available	VMH	30371894
MMDBr0008029	Hydrogen	Hydrogen	Not Available	VMH	30371894
MMDBr0001423	Palmitic acid	Palmitic acid	Not Available	VMH	11788354; 12864740
MMDBr0006946	Heme	Heme	Not Available	VMH	30371894
MMDBr0006947	Heptosyl-phospho-heptosyl-heptosyl-kdo2-lipidA	Phospho-heptosyl-phospho-heptosyl-heptosyl-kdo2-lipidA	Not Available	VMH	30371894
MMDBr0006948	ADP-L-Glycero-D-manno-heptose	Heptosyl-phospho-heptosyl-heptosyl-kdo2-lipidA	Not Available	VMH	30371894
MMDBr0007463	4-Methyl-5-(2-hydroxyethyl)-thiazole	4-Methyl-5-(2-phosphoethyl)-thiazole	Not Available	VMH	30371894
MMDBr0007464	D-Glucose	Glucose 6-phosphate	Not Available	VMH	30371894
MMDBr0001428	Glucosamine	Glucosamine 6-phosphate	Not Available	VMH	30371894
MMDBr0001429	D-Mannose	Mannose 6-phosphate	Not Available	VMH	30371894
MMDBr0007864	D-Fructose	Fructose 6-phosphate	Not Available	VMH	30371894
MMDBr0007867	L-Histidine	Urocanic acid	Not Available	VMH	30371894
MMDBr0007070	L-Histidinol	L-Histidine	Not Available	VMH	30371894
MMDBr0010852	L-Histidinol	L-Histidinal	Not Available	VMH	30371894
MMDBr0010853	L-Histidinal	L-Histidine	Not Available	VMH	30371894
MMDBr0001444	Potassium	Potassium	Not Available	VMH	2160952; 7900835
MMDBr0007465	Porphobilinogen	Hydroxymethylbilane	Not Available	VMH	30371894
MMDBr0007466	4-Amino-5-hydroxymethyl-2-methylpyrimidine	4-Amino-2-methyl-5-phosphomethylpyrimidine	Not Available	VMH	30371894
MMDBr0007616	6-Hydroxymethyl dihydropterin	6-Hydroxymethyl-dihydropterin pyrophosphate	Not Available	VMH	30371894
MMDBr0007467	L-Homoserine	O-Phosphohomoserine	Not Available	VMH	30371894
MMDBr0007071	L-Homoserine	O-Succinyl-L-homoserine	Not Available	VMH	30371894
MMDBr0007871	Hypoxanthine	Inosinic acid	Not Available	VMH	30371894
MMDBr0008270	Ornithine	N2-Succinyl-L-ornithine	Not Available	VMH	30371894
MMDBr0001493	Isocitric acid	Oxoglutaric acid	Not Available	VMH	10521434
MMDBr0007875	Chorismate	Isochorismate	Not Available	VMH	30371894
MMDBr0007072	D-erythro-1-(Imidazol-4-yl)glycerol 3-phosphate	3-(Imidazol-4-yl)-2-oxopropyl phosphate	Not Available	VMH	30371894
MMDBr0007468	Oxoglutaric acid	3-Methyl-2-oxovaleric acid	Not Available	VMH	30371894
MMDBr0007879	Inosinic acid	Phosphoribosyl formamidocarboxamide	Not Available	VMH	30371894
MMDBr0007470	Inosinic acid	Xanthylic acid	Not Available	VMH	30371894
MMDBr0007018	Indole	Indole	Not Available	VMH	30371894
MMDBr0007471	Inosine	Inosine	Not Available	VMH	30371894
MMDBr0005492	Isopentenyl pyrophosphate	Dimethylallylpyrophosphate	Not Available	VMH	30371894
MMDBr0007472	1-Hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate	Isopentenyl pyrophosphate	Not Available	VMH	30371894
MMDBr0007473	1-Hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate	Isopentenyl pyrophosphate	Not Available	VMH	30371894
MMDBr0007074	3-Carboxy-2-hydroxy-4-methylpentanoate	3-Carboxy-4-methyl-2-oxopentanoate	Not Available	VMH	30371894
MMDBr0007075	3-Carboxy-2-hydroxy-4-methylpentanoate	2-Isopropylmaleate	Not Available	VMH	30371894
MMDBr0007076	2-Isopropylmaleate	3-Carboxy-3-hydroxy-4-methylpentanoate	Not Available	VMH	30371894
MMDBr0008201	Isobutyric acid	Isobutyric acid	Not Available	VMH	30371894
MMDBr0008206	Isocaproic acid	Isocaproic acid	Not Available	VMH	30371894
MMDBr0008204	Isovaleric acid	Isovaleric acid	Not Available	VMH	30371894
MMDBr0007881	4-Imidazolone-5-propionic acid	Formiminoglutamic acid	Not Available	VMH	30371894
MMDBr0007474	(R)-2,3-Dihydroxy-3-methylbutanoate	(S)-2-Acetolactate	Not Available	VMH	30371894
MMDBr0007475	D-Arabinose 5-phosphate	3-Deoxy-D-manno-octulosonate 8-phosphate	Not Available	VMH	30371894
MMDBr0007882	Potassium	Potassium	Not Available	VMH	30371894
MMDBr0007077	Alpha-Lactose	D-Galactose	Not Available	VMH	30371894
MMDBr0007883	L-Arogenate	L-Aspartic acid	Not Available	VMH	30371894
MMDBr0007884	Lactaldehyde	L-Lactic acid	Not Available	VMH	30371894
MMDBr0007078	Lactaldehyde	(S)-Propane-1,2-diol	Not Available	VMH	30371894
MMDBr0007165	Alpha-Lactose	Alpha-Lactose	Not Available	VMH	30371894
MMDBr0008207	L-Leucine	Isocaproic acid	Not Available	VMH	30371894
MMDBr0007476	Oxoglutaric acid	Ketoleucine	Not Available	VMH	30371894
MMDBr0007477	L-Leucine	L-Leucine	Not Available	VMH	30371894
MMDBr0007889	Glutathione	S-Lactoylglutathione	Not Available	VMH	30371894
MMDBr0006950	L-Lysine	(3S)-3,6-Diaminohexanoate	Not Available	VMH	30371894
MMDBr0007480	L-Lysine	L-Lysine	Not Available	VMH	30371894
MMDBr0007119	L-Arogenate	L-Tyrosine	Not Available	VMH	30371894
MMDBr0007481	L-Lactic acid	L-Lactic acid	Not Available	VMH	30371894
MMDBr0007664	S-Adenosylmethionine	S-Adenosylhomocysteine	Not Available	VMH	30371894
MMDBr0007894	D-Maltose	D-Glucose	Not Available	VMH	30371894
MMDBr0007895	D-Maltose	Acetyl-maltose	Not Available	VMH	30371894
MMDBr0007122	Maltotriose	Maltotriose	Not Available	VMH	30371894
MMDBr0007123	D-Maltose	D-Maltose	Not Available	VMH	30371894
MMDBr0007483	Guanosine diphosphate	Guanosine diphosphate mannose	Not Available	VMH	30371894
MMDBr0007484	Mannose 6-phosphate	Fructose 6-phosphate	Not Available	VMH	30371894
MMDBr0008314	D-Mannose	D-Mannose	Not Available	VMH	30371894
MMDBr0007900	(S)-malate(2-)	Oxalacetic acid	Not Available	VMH	30371894
MMDBr0007485	2-C-Methyl-D-erythritol 2,4-cyclodiphosphate	1-Hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate	Not Available	VMH	30371894
MMDBr0007167	TG(18:4(6Z,9Z,12Z,15Z)/18:1(9Z)/20:5(5Z,8Z,11Z,14Z,17Z))	TG(18:4(6Z,9Z,12Z,15Z)/18:1(9Z)/20:5(5Z,8Z,11Z,14Z,17Z))	Not Available	VMH	30371894
MMDBr0007486	L-methionyl-L-alanine	L-Alanine	Not Available	VMH	30371894
MMDBr0001644	L-Methionine	S-Adenosylmethionine	Not Available	VMH	30371894
MMDBr0007126	5-Methyltetrahydrofolic acid	5,10-Methylene-THF	Not Available	VMH	30371894
MMDBr0001646	5-Methyltetrahydrofolic acid	L-Methionine	Not Available	VMH	30371894
MMDBr0007490	Magnesium	Magnesium	Not Available	VMH	30371894
MMDBr0001652	Dihydroxyacetone phosphate	BPG	Not Available	VMH	30371894
MMDBr0007491	Magnesium	Magnesium	Not Available	VMH	30371894
MMDBr0007902	myo-Inositol 6-phosphate	myo-Inositol	Not Available	VMH	30371894
MMDBr0007903	Myo-inositol 1-phosphate	myo-Inositol	Not Available	VMH	30371894
MMDBr0007904	D-Myo-inositol 4-phosphate	myo-Inositol	Not Available	VMH	30371894
MMDBr0001678	Maltotriose	D-Glucose	Not Available	VMH	12370436
MMDBr0001681	Methylmalonyl-CoA	Propionyl-CoA	Not Available	VMH	12123667; 12955715
MMDBr0008267	R-Methylmalonyl-CoA	Methylmalonyl-CoA	Not Available	VMH	30371894
MMDBr0008172	Succinyl-CoA	R-Methylmalonyl-CoA	Not Available	VMH	30371894
MMDBr0007912	D-Mannonate	2-Dehydro-3-deoxy-D-gluconate	Not Available	VMH	30371894
MMDBr0006954	CMP-3-Deoxy-D-manno-octulosonate	Cytidine monophosphate	Not Available	VMH	30371894
MMDBr0007202	alpha-Ketoisovaleric acid	2-Dehydropantoate	Not Available	VMH	30371894
MMDBr0007492	5,10-Methenyltetrahydrofolic acid	10-Formyltetrahydrofolic acid	Not Available	VMH	30371894
MMDBr0007493	5,10-Methylene-THF	5,10-Methenyltetrahydrofolic acid	Not Available	VMH	30371894
MMDBr0006991	Nicotinic acid	Nicotinic acid	Not Available	VMH	30371894
MMDBr0006955	MK-8	Menaquinol 8	Not Available	VMH	30371894
MMDBr0006956	2-Demethylmenaquinone 8	2-Demethylmenaquinol 8	Not Available	VMH	30371894
MMDBr0007495	Thymidine 5'-triphosphate	dTDP	Not Available	VMH	30371894
MMDBr0007650	Nicotinic acid adenine dinucleotide	L-Glutamic acid	Not Available	VMH	30371894
MMDBr0007646	Nicotinic acid	Nicotinic acid mononucleotide	Not Available	VMH	30371894
MMDBr0007204	N-Carbamoylputrescine	Putrescine	Not Available	VMH	30371894
MMDBr0007498	Guanosine diphosphate	Guanosine triphosphate	Not Available	VMH	30371894
MMDBr0007499	Uridine 5'-diphosphate	Uridine triphosphate	Not Available	VMH	30371894
MMDBr0007500	CDP	Cytidine triphosphate	Not Available	VMH	30371894
MMDBr0007501	dTDP	Thymidine 5'-triphosphate	Not Available	VMH	30371894
MMDBr0007503	dUDP	Deoxyuridine triphosphate	Not Available	VMH	30371894
MMDBr0007504	dCDP	dCTP	Not Available	VMH	30371894
MMDBr0007506	IDP	Inosine triphosphate	Not Available	VMH	30371894
MMDBr0007507	Nicotinic acid mononucleotide	Nicotinic acid adenine dinucleotide	Not Available	VMH	30371894
MMDBr0007508	Phosphoribosyl pyrophosphate	Nicotinic acid mononucleotide	Not Available	VMH	30371894
MMDBr0008022	Menaquinol 8	MK-8	Not Available	VMH	30371894
MMDBr0007509	Nicotinic acid	Nicotinic acid ribonucleoside	Not Available	VMH	30371894
MMDBr0007921	Nicotinic acid mononucleotide	Nicotinic acid ribonucleoside	Not Available	VMH	30371894
MMDBr0007510	dUMP	Deoxyuridine	Not Available	VMH	30371894
MMDBr0007644	Xanthylic acid	Xanthosine	Not Available	VMH	30371894
MMDBr0007645	Inosinic acid	Inosine	Not Available	VMH	30371894
MMDBr0007637	Uridine 5'-monophosphate	Uridine	Not Available	VMH	30371894
MMDBr0007922	dCMP	Deoxycytidine	Not Available	VMH	30371894
MMDBr0007638	Cytidine monophosphate	Cytidine	Not Available	VMH	30371894
MMDBr0007639	5-Thymidylic acid	Thymidine	Not Available	VMH	30371894
MMDBr0007923	Nicotinamide ribotide	Nicotinamide riboside	Not Available	VMH	30371894
MMDBr0007640	Deoxyadenosine monophosphate	Deoxyadenosine	Not Available	VMH	30371894
MMDBr0007642	2'-Deoxyguanosine 5'-monophosphate	Deoxyguanosine	Not Available	VMH	30371894
MMDBr0007643	Guanosine monophosphate	Guanosine	Not Available	VMH	30371894
MMDBr0007924	dGTP	Deoxyguanosine	Not Available	VMH	30371894
MMDBr0007927	Ferricytochrome c	Ferrocytochrome c	Not Available	VMH	30371894
MMDBr0001804	Starch, Structure 2 (1,6-{2[1,4-Glc], [1,4-Glc]})	D-Glucose	Not Available	VMH	30371894
MMDBr0007512	Citric acid	Oxalacetic acid	Not Available	VMH	30371894
MMDBr0007929	2-Ketobutyric acid	Formic acid	Not Available	VMH	30371894
MMDBr0001818	Stearic acid	Stearic acid	Not Available	VMH	11788354; 12864740
MMDBr0008123	3-Carboxy-4-methyl-2-oxopentanoate	Ketoleucine	Not Available	VMH	30371894
MMDBr0007514	Orotidylic acid	Uridine 5'-monophosphate	Not Available	VMH	30371894
MMDBr0007130	N2-Acetylornithine	N-Acetylglutamic acid	Not Available	VMH	30371894
MMDBr0007516	Orotic acid	Orotidylic acid	Not Available	VMH	30371894
MMDBr0007206	L-D-1-Pyrroline-5-carboxylic acid	L-Glutamic acid	Not Available	VMH	30371894
MMDBr0007517	L-Proline	L-D-1-Pyrroline-5-carboxylic acid	Not Available	VMH	30371894
MMDBr0008209	p-Hydroxyphenylacetic acid	4-Hydroxyphenylacetyl-CoA	Not Available	VMH	30371894
MMDBr0008208	Phenylacetic acid	Phenylacetyl-CoA	Not Available	VMH	30371894
MMDBr0007934	Phosphonoacetaldehyde	Acetaldehyde	Not Available	VMH	30371894
MMDBr0008210	Phenylacetic acid	Phenylacetic acid	Not Available	VMH	30371894
MMDBr0007207	beta-Alanine	Pantothenic acid	Not Available	VMH	30371894
MMDBr0008197	Butyryl-CoA	Butanoyl phosphate	Not Available	VMH	30371894
MMDBr0007518	Lead	Lead	Not Available	VMH	30371894
MMDBr0006960	Hydrogen carbonate	Oxalacetic acid	Not Available	VMH	30371894
MMDBr0006961	S-Adenosylmethionine	S-Adenosylhomocysteine	Not Available	VMH	30371894
MMDBr0006962	S-Adenosylmethionine	S-Adenosylhomocysteine	Not Available	VMH	30371894
MMDBr0006963	Precorrin 6A	Precorrin 6B	Not Available	VMH	30371894
MMDBr0006964	S-Adenosylmethionine	S-Adenosylhomocysteine	Not Available	VMH	30371894
MMDBr0006965	Precorrin 8	Hydrogenobyrinate	Not Available	VMH	30371894
MMDBr0007160	Lipoamide	S-Acetyldihydrolipoamide	Not Available	VMH	30371894
MMDBr0007131	S-Acetyldihydrolipoamide	Dihydrolipoamide	Not Available	VMH	30371894
MMDBr0007935	Dihydrolipoamide	Lipoamide	Not Available	VMH	30371894
MMDBr0001903	Pyridoxine 5'-phosphate	Hydrogen peroxide	Not Available	VMH	15182361; 6380540
MMDBr0008036	Pyridoxine 5'-phosphate	Pyridoxal 5'-phosphate	Not Available	VMH	30371894
MMDBr0008035	1-Deoxy-D-xylulose 5-phosphate	Pyridoxine 5'-phosphate	Not Available	VMH	30371894
MMDBr0007208	3-Amino-2-oxopropyl phosphate	Pyridoxine 5'-phosphate	Not Available	VMH	30371894
MMDBr0007936	Fructose 6-phosphate	Fructose 1,6-bisphosphate	Not Available	VMH	30371894
MMDBr0006966	D-Sedoheptulose 7-phosphate	Sedoheptulose 1,7-bisphosphate	Not Available	VMH	30371894
MMDBr0007519	D-Glucosamine 1-phosphate	Glucosamine 6-phosphate	Not Available	VMH	30371894
MMDBr0007520	3-Phospho-D-glycerate	Phosphohydroxypyruvic acid	Not Available	VMH	30371894
MMDBr0007521	Glucose 6-phosphate	Fructose 6-phosphate	Not Available	VMH	30371894
MMDBr0007522	3-Phospho-D-glycerate	Glyceric acid 1,3-biphosphate	Not Available	VMH	30371894
MMDBr0007523	6-Phosphonoglucono-D-lactone	6-Phosphogluconic acid	Not Available	VMH	30371894
MMDBr0007938	Phosphoglycolic acid	Glycolic acid	Not Available	VMH	30371894
MMDBr0007524	2-Phospho-D-glyceric acid	3-Phospho-D-glycerate	Not Available	VMH	30371894
MMDBr0007525	Glucose 1-phosphate	Glucose 6-phosphate	Not Available	VMH	30371894
MMDBr0007939	Oxoglutaric acid	L-Glutamic acid	Not Available	VMH	30371894
MMDBr0007634	L-Phenylalanine	L-Phenylalanine	Not Available	VMH	30371894
MMDBr0007526	O-Phospho-4-hydroxy-L-threonine	2-Amino-3-oxo-4-phosphonooxybutyrate	Not Available	VMH	30371894
MMDBr0007527	S-Adenosylmethionine	S-Adenosylhomocysteine	Not Available	VMH	30371894
MMDBr0007530	D-Mannose 1-phosphate	Mannose 6-phosphate	Not Available	VMH	30371894
MMDBr0007531	4-Amino-2-methyl-5-phosphomethylpyrimidine	2-Methyl-4-amino-5-hydroxymethylpyrimidine diphosphate	Not Available	VMH	30371894
MMDBr0007532	Nicotinamide riboside	Niacinamide	Not Available	VMH	30371894
MMDBr0007533	Pantothenic acid	D-4'-Phosphopantothenate	Not Available	VMH	30371894
MMDBr0007535	Propanoyl phosphate	Propionic acid	Not Available	VMH	30371894
MMDBr0007001	Propionic acid	Propionic acid	Not Available	VMH	30371894
MMDBr0007536	5-Aminolevulinic acid	Porphobilinogen	Not Available	VMH	30371894
MMDBr0007537	4-Phosphopantothenoylcysteine	Pantetheine 4'-phosphate	Not Available	VMH	30371894
MMDBr0007941	Oxalacetic acid	Phosphoenolpyruvic acid	Not Available	VMH	30371894
MMDBr0007540	D-4'-Phosphopantothenate	4-Phosphopantothenoylcysteine	Not Available	VMH	30371894
MMDBr0007209	Prephenate	4-Hydroxyphenylpyruvic acid	Not Available	VMH	30371894
MMDBr0007210	Prephenate	4-Hydroxyphenylpyruvic acid	Not Available	VMH	30371894
MMDBr0007134	Prephenate	Phenylpyruvic acid	Not Available	VMH	30371894
MMDBr0007942	Fumaric acid	Protoporphyrin IX	Not Available	VMH	30371894
MMDBr0008125	Protoporphyrinogen IX	Protoporphyrin IX	Not Available	VMH	30371894
MMDBr0007542	Glycine	Glycineamideribotide	Not Available	VMH	30371894
MMDBr0007944	Phosphoribosylformylglycineamidine	5-Aminoimidazole ribonucleotide	Not Available	VMH	30371894
MMDBr0007945	5-Amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate	SAICAR	Not Available	VMH	30371894
MMDBr0007135	1-(5-phosphoribosyl)-ATP	1-(5-Phosphoribosyl)-AMP	Not Available	VMH	30371894
MMDBr0007946	5'-Phosphoribosyl-N-formylglycineamide	Phosphoribosylformylglycineamidine	Not Available	VMH	30371894
MMDBr0007543	L-Proline	L-D-1-Pyrroline-5-carboxylic acid	Not Available	VMH	30371894
MMDBr0007544	L-Proline	L-D-1-Pyrroline-5-carboxylic acid	Not Available	VMH	30371894
MMDBr0007212	4-Hydroxyproline	Pyrroline hydroxycarboxylic acid	Not Available	VMH	30371894
MMDBr0007546	L-Proline	L-Proline	Not Available	VMH	30371894
MMDBr0007547	D-Ribose-5-phosphate	Phosphoribosyl pyrophosphate	Not Available	VMH	30371894
MMDBr0007548	Phosphohydroxypyruvic acid	Oxoglutaric acid	Not Available	VMH	30371894
MMDBr0007549	Phosphoserine	L-Serine	Not Available	VMH	30371894
MMDBr0007550	Propionyl-CoA	Propanoyl phosphate	Not Available	VMH	30371894
MMDBr0007552	Pantetheine 4'-phosphate	Dephospho-CoA	Not Available	VMH	30371894
MMDBr0006969	Putrescine	Putrescine	Not Available	VMH	30371894
MMDBr0007553	Adenosine	Adenine	Not Available	VMH	30371894
MMDBr0007554	Deoxyadenosine	Deoxyribose 1-phosphate	Not Available	VMH	30371894
MMDBr0007555	Guanosine	Guanine	Not Available	VMH	30371894
MMDBr0007556	Deoxyguanosine	Deoxyribose 1-phosphate	Not Available	VMH	30371894
MMDBr0007557	Inosine	Hypoxanthine	Not Available	VMH	30371894
MMDBr0007558	Deoxyinosine	Deoxyribose 1-phosphate	Not Available	VMH	30371894
MMDBr0007559	Xanthosine	Ribose-1-phosphate	Not Available	VMH	30371894
MMDBr0007214	L-Glutamic-gamma-semialdehyde	L-Glutamic acid	Not Available	VMH	30371894
MMDBr0002037	Pyridoxamine 5'-phosphate	Hydrogen peroxide	Not Available	VMH	6380540
MMDBr0007951	Pyridoxamine	Pyridoxamine 5'-phosphate	Not Available	VMH	30371894
MMDBr0008042	Pyridoxamine	Pyridoxamine	Not Available	VMH	30371894
MMDBr0002041	Pyridoxal	Pyridoxal 5'-phosphate	Not Available	VMH	30371894
MMDBr0007952	Pyridoxine	Pyridoxine 5'-phosphate	Not Available	VMH	30371894
MMDBr0008038	Pyridoxine	Pyridoxine	Not Available	VMH	30371894
MMDBr0008040	Pyridoxal	Pyridoxal	Not Available	VMH	30371894
MMDBr0007560	Dihydroxyacetone phosphate	Quinolinic acid	Not Available	VMH	30371894
MMDBr0006970	L-Glutamine	L-Glutamic acid	Not Available	VMH	30371894
MMDBr0007169	Raffinose	Raffinose	Not Available	VMH	30371894
MMDBr0007136	Raffinose	D-Galactose	Not Available	VMH	30371894
MMDBr0007137	Raffinose	D-Fructose	Not Available	VMH	30371894
MMDBr0007954	L-Ribulose 5-phosphate	L-Xylulose 5-phosphate	Not Available	VMH	30371894
MMDBr0007561	Riboflavin	Flavin mononucleotide	Not Available	VMH	30371894
MMDBr0007667	D-Ribose	D-Ribose-5-phosphate	Not Available	VMH	30371894
MMDBr0007955	(R)-Lipoic acid	Lipoyl-AMP	Not Available	VMH	30371894
MMDBr0004741	5-Hydroxyisourate	Allantoin	Not Available	VMH	11342423; 8248161
MMDBr0007563	D-Ribulose 5-phosphate	Xylulose 5-phosphate	Not Available	VMH	30371894
MMDBr0007564	D-Ribose-5-phosphate	D-Ribulose 5-phosphate	Not Available	VMH	30371894
MMDBr0007565	D-Sedoheptulose 7-phosphate	D-Glycero-D-manno-heptose 7-phosphate	Not Available	VMH	30371894
MMDBr0007961	Guanosine triphosphate	Adenosine phosphosulfate	Not Available	VMH	30371894
MMDBr0007142	Oxoglutaric acid	2-Succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate	Not Available	VMH	30371894
MMDBr0007215	L-Serine	O-Acetyl-L-serine	Not Available	VMH	30371894
MMDBr0007568	L-Serine	L-Serine	Not Available	VMH	30371894
MMDBr0006974	Cobalt	Cobalt-precorrin 2	Not Available	VMH	30371894
MMDBr0007144	Hydrogen sulfide	Homocysteine	Not Available	VMH	30371894
MMDBr0007965	Spermidine	N1-Acetylspermidine	Not Available	VMH	30371894
MMDBr0007966	Spermidine	N8-Acetylspermidine	Not Available	VMH	30371894
MMDBr0006976	Spermidine	Spermidine	Not Available	VMH	30371894
MMDBr0007571	superoxide	Hydrogen peroxide	Not Available	VMH	30371894
MMDBr0007146	Stachyose	D-Galactose	Not Available	VMH	30371894
MMDBr0010898	Stachyose	Stachyose	Not Available	VMH	30371894
MMDBr0007572	Succinic acid	Succinic acid	Not Available	VMH	30371894
MMDBr0007573	Succinic acid	Fumaric acid	Not Available	VMH	30371894
MMDBr0010895	MK-8	Fumaric acid	Not Available	VMH	30371894
MMDBr0007147	Succinic acid	Succinyl-CoA	Not Available	VMH	30371894
MMDBr0007170	Sucrose	D-Fructose	Not Available	VMH	30371894
MMDBr0007171	Sucrose	Sucrose	Not Available	VMH	30371894
MMDBr0007574	Glyceraldehyde 3-phosphate	D-Erythrose 4-phosphate	Not Available	VMH	30371894
MMDBr0007970	4,6-Dideoxy-4-oxo-dTDP-D-glucose	dTDP-4-Dehydro-6-deoxy-L-mannose	Not Available	VMH	30371894
MMDBr0007971	dTDP-4-Dehydro-6-deoxy-L-mannose	Deoxythymidine diphosphate-L-rhamnose	Not Available	VMH	30371894
MMDBr0007972	dTDP-D-Glucose	4,6-Dideoxy-4-oxo-dTDP-D-glucose	Not Available	VMH	30371894
MMDBr0007576	Thymidine	Thymidine	Not Available	VMH	30371894
MMDBr0007973	L-Threonine	Acetaldehyde	Not Available	VMH	30371894
MMDBr0007035	L-Threonine	L-2-Amino-3-oxobutanoic acid	Not Available	VMH	30371894
MMDBr0006977	L-Threonine O-3-phosphate	D-1-Aminopropan-2-ol O-phosphate	Not Available	VMH	30371894
MMDBr0007577	O-Phosphohomoserine	L-Threonine	Not Available	VMH	30371894
MMDBr0007631	L-Threonine	L-Threonine	Not Available	VMH	30371894
MMDBr0007578	D-Ribose-5-phosphate	Glyceraldehyde 3-phosphate	Not Available	VMH	30371894
MMDBr0007579	D-Erythrose 4-phosphate	Fructose 6-phosphate	Not Available	VMH	30371894
MMDBr0007580	Thymidine	5-Thymidylic acid	Not Available	VMH	30371894
MMDBr0007581	Thiamine	Thiamine pyrophosphate	Not Available	VMH	30371894
MMDBr0007980	dUMP	Dihydrofolic acid	Not Available	VMH	30371894
MMDBr0012620	Thiamine monophosphate	Thiamine pyrophosphate	Not Available	VMH	30371894
MMDBr0007583	2-Methyl-4-amino-5-hydroxymethylpyrimidine diphosphate	Thiamine monophosphate	Not Available	VMH	30371894
MMDBr0007584	Dihydroxyacetone phosphate	Glyceraldehyde 3-phosphate	Not Available	VMH	30371894
MMDBr0010964	L-Tryptophan	Indole	Not Available	VMH	30371894
MMDBr0012657	Indole	L-Tryptophan	Not Available	VMH	30371894
MMDBr0012658	Oxoglutaric acid	L-Glutamic acid	Not Available	VMH	30371894
MMDBr0007152	L-Tryptophan	L-Tryptophan	Not Available	VMH	30371894
MMDBr0007672	2-Hydroxy-3-oxopropanoate	Glyceric acid	Not Available	VMH	30371894
MMDBr0002287	Myristic acid	Myristic acid	Not Available	VMH	10811962; 11161786
MMDBr0007987	Oxoglutaric acid	4-Hydroxyphenylpyruvic acid	Not Available	VMH	30371894
MMDBr0007586	Meso-2,6-Diaminoheptanedioate	UDP-N-Acetylmuramoyl-L-alanyl-D-gamma-glutamyl-meso-2,6-diaminopimelate	Not Available	VMH	30371894
MMDBr0006980	Uridine diphosphate-N-acetylglucosamine	UDP-N-Acetyl-D-mannosamine	Not Available	VMH	30371894
MMDBr0006981	Uridine diphosphate-N-acetylglucosamine	N-Acetylmannosamine	Not Available	VMH	30371894
MMDBr0007587	Uridine diphosphate-N-acetylglucosamine	Uridine diphosphate-N-acetylgalactosamine	Not Available	VMH	30371894
MMDBr0007588	N-Acetyl-glucosamine 1-phosphate	Uridine diphosphate-N-acetylglucosamine	Not Available	VMH	30371894
MMDBr0007589	D-Glutamate	UDP-N-Acetylmuramoyl-L-alanyl-D-glutamate	Not Available	VMH	30371894
MMDBr0007590	Undecaprenyl diphosphate	Undecaprenyl phosphate	Not Available	VMH	30371894
MMDBr0007989	Farnesyl pyrophosphate	Undecaprenyl diphosphate	Not Available	VMH	30371894
MMDBr0007591	Uridine diphosphate glucose	Uridine diphosphategalactose	Not Available	VMH	30371894
MMDBr0007990	Uridine diphosphate glucose	UDP-Glucuronic acid	Not Available	VMH	30371894
MMDBr0008055	Galactose 1-phosphate	Glucose 1-phosphate	Not Available	VMH	30371894
MMDBr0007592	Uridine 5'-monophosphate	Uridine 5'-diphosphate	Not Available	VMH	30371894
MMDBr0007593	Hydroxymethylbilane	Uroporphyrinogen III	Not Available	VMH	30371894
MMDBr0007594	Uroporphyrinogen III	Coproporphyrinogen III	Not Available	VMH	30371894
MMDBr0007993	Phosphoribosyl pyrophosphate	Uridine 5'-monophosphate	Not Available	VMH	30371894
MMDBr0010881	Uracil	Uracil	Not Available	VMH	30371894
MMDBr0008058	Urocanic acid	4-Imidazolone-5-propionic acid	Not Available	VMH	30371894
MMDBr0007595	Urea	Urea	Not Available	VMH	30371894
MMDBr0007596	dUMP	dUDP	Not Available	VMH	30371894
MMDBr0002361	Uridine	Uridine 5'-monophosphate	Not Available	VMH	30371894
MMDBr0008002	Guanosine triphosphate	Guanosine diphosphate	Not Available	VMH	30371894
MMDBr0006748	Inosine triphosphate	IDP	Not Available	VMH	30371894
MMDBr0008008	Thymidine 5'-triphosphate	dTDP	Not Available	VMH	30371894
MMDBr0007597	Uridine	Uridine	Not Available	VMH	30371894
MMDBr0006983	UDP-2,3-Bis(3-hydroxytetradecanoyl)glucosamine	2,3-Bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate	Not Available	VMH	30371894
MMDBr0008503	Uridine triphosphate	Uridine 5'-diphosphate	Not Available	VMH	30371894
MMDBr0008202	L-Valine	Isobutyric acid	Not Available	VMH	30371894
MMDBr0007598	Oxoglutaric acid	alpha-Ketoisovaleric acid	Not Available	VMH	30371894
MMDBr0007599	L-Valine	L-Valine	Not Available	VMH	30371894
MMDBr0010883	Xanthine	Xanthine	Not Available	VMH	30371894
MMDBr0010884	Phosphoribosyl pyrophosphate	Xanthylic acid	Not Available	VMH	30371894
MMDBr0007157	D-Xylose	D-Xylulose	Not Available	VMH	30371894
MMDBr0007158	D-Glucose	D-Fructose	Not Available	VMH	30371894
MMDBr0002406	D-Xylulose	Xylulose 5-phosphate	Not Available	VMH	30371894
MMDBr0008082	D-Xylose	D-Xylose	Not Available	VMH	30371894
MMDBr0008012	D-Xylose	D-Xylose	Not Available	VMH	30371894
MMDBr0008113	Potassium	Potassium	Not Available	VMH	30371894
MMDBr0007601	Zinc	Zinc	Not Available	VMH	30371894
MMDBr0007604	Oxalosuccinic acid	Oxoglutaric acid	Not Available	VMH	30371894
MMDBr0002459	Guanosine triphosphate	Formamidopyrimidine nucleoside triphosphate	Not Available	VMH	10727395
MMDBr0007605	L-Asparagine	L-Aspartic acid	Not Available	VMH	30371894
MMDBr0007673	Glyceric acid	3-Phospho-D-glycerate	Not Available	VMH	30371894
MMDBr0007610	Isocitric acid	Oxalosuccinic acid	Not Available	VMH	30371894
MMDBr0007612	D-4'-Phosphopantothenate	4-Phosphopantothenoylcysteine	Not Available	VMH	30371894
MMDBr0002669	Dihydroneopterin triphosphate	2,5-Diamino-6-(5'-triphosphoryl-3',4'-trihydroxy-2'-oxopentyl)-amino-4-oxopyrimidine	Not Available	VMH	10727395
MMDBr0002705	Formamidopyrimidine nucleoside triphosphate	Formic acid	Not Available	VMH	10727395
MMDBr0002707	2,5-Diaminopyrimidine nucleoside triphosphate	2,5-Diamino-6-(5'-triphosphoryl-3',4'-trihydroxy-2'-oxopentyl)-amino-4-oxopyrimidine	Not Available	VMH	10727395
MMDBr0008016	5-Methyltetrahydrofolic acid	5,10-Methylene-THF	Not Available	VMH	30371894

Genome Data

Genome Link

MMDBm0000044

Genome Length

5577678 bp

# Predicted Proteins

4447

GenBank Sequence Modification Date

17-FEB-2022

MiMeDB Deposition Date

2022-08-28 03:46:28 UTC

Reference

PMID: 17704766

Source Links

GenBank

NZ_ABZX00000000

Bacteroides fragilis 3_1_12 (MMDBm0000044)