| MMDBm0002280 | Escherichia coli DH1 | Bacteria | Proteobacteria | Not Available | Not Available | RHEA |
| MMDBm0002404 | Pseudomonas aeruginosa PA7 | Bacteria | Proteobacteria | Human | Not Available | RHEA |
| MMDBm0001687 | Helicobacter pylori HPAG1 | Bacteria | Proteobacteria | Human | Not Available | RHEA |
| MMDBm0000007 | Acinetobacter pittii ANC 4052 | Bacteria | Proteobacteria | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0550879 | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2-4 | Bacteria | Proteobacteria | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0505749 | Methyloversatilis universalis Fam500 | Bacteria | Proteobacteria | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0001211 | Aliivibrio salmonicida LFI1238 | Bacteria | Proteobacteria | Not Available | Not Available | RHEA |
| MMDBm0002396 | Pseudomonas syringae pv. syringae B728a | Bacteria | Proteobacteria | Not Available | Not Available | RHEA |
| MMDBm0002435 | Rhizobium leguminosarum bv. viciae 3841 | Bacteria | Proteobacteria | Not Available | Not Available | RHEA |
| MMDBm0001932 | Neisseria meningitidis 053442 | Bacteria | Proteobacteria | Human | Not Available | RHEA |
| MMDBm0482767 | Bordetella hinzii OH87 BAL007II | Bacteria | Proteobacteria | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0000411 | Rhodobacter capsulatus | Bacteria | Proteobacteria | Human | Not Available | RHEA |
| MMDBm0558116 | Proteus mirabilis ATCC 29906 | Bacteria | Proteobacteria | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0515049 | Helicobacter canadensis MIT 98-5491 | Bacteria | Proteobacteria | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0001411 | Caulobacter crescentus NA1000 | Bacteria | Proteobacteria | Not Available | Not Available | RHEA |
| MMDBm0002512 | Shewanella sp. MR-4 | Bacteria | Proteobacteria | Not Available | Not Available | RHEA |
| MMDBm0543506 | Escherichia sp. 4_1_40B | Bacteria | Proteobacteria | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0610855 | Vibrio harveyi | Bacteria | Proteobacteria | Not Available | Not Available | RHEA |
| MMDBm0001592 | Escherichia coli O157:H7 str. EC4115 | Bacteria | Proteobacteria | Human | Not Available | RHEA |
| MMDBm0002342 | Paracoccus denitrificans PD1222 | Bacteria | Proteobacteria | Not Available | Not Available | RHEA |
| MMDBm0001660 | Haemophilus influenzae PittEE | Bacteria | Proteobacteria | Human | Not Available | RHEA |
| MMDBm0001144 | Burkholderiales bacterium 1_1_47 | Bacteria | Proteobacteria | Human Feces | Indirect association between microbiota composition and metabolites measured in host biospecimen | Not Available |
| MMDBm0002742 | Vibrio vulnificus YJ016 | Bacteria | Proteobacteria | Human | Not Available | RHEA |
| MMDBm0546994 | Kluyvera ascorbata ATCC 33433 | Bacteria | Proteobacteria | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0503548 | Eikenella corrodens ATCC 23834 | Bacteria | Proteobacteria | Human Feces | Metabolic reconstruction | VMH |
