Record Information
Version1.0
StatusDetected and Quantified
Creation Date2021-11-17 23:25:36 UTC
Update Date2024-10-11 01:33:12 UTC
Metabolite IDMMDBc0029518
Metabolite Identification
Common NamedGDP
DescriptionDeoxyguanosine diphosphate or dGDP is a member of the chemical class known as Purine 2'-deoxyribonucleoside Diphosphates. These are purine nucleotides with diphosphate group linked to the ribose moiety lacking an hydroxyl group at position 2. DGDP is invovled in Purine metabolism. It is related to the common nucleic acid GTP, or guanosine triphosphate, with the -OH (hydroxyl) group on the 2' carbon on the nucleotide's pentose removed (hence the deoxy- part of the name), and with one fewer phosphoryl group than GTP.
Structure
Synonyms
ValueSource
2'-Deoxyguanosine 5'-diphosphateChEBI
Deoxyguanosine diphosphateChEBI
2'-Deoxyguanosine 5'-diphosphoric acidGenerator
Deoxyguanosine diphosphoric acidGenerator
2'-Deoxy-GDPHMDB
2'-Deoxyguanosine-5'-diphosphateHMDB
5'-dGDPHMDB
Deoxyguanosine 5'-diphosphateHMDB
Deoxyguanosine-diphosphateHMDB
Molecular FormulaC10H15N5O10P2
Average Mass427.2011
Monoisotopic Mass427.029414749
IUPAC Name[({[(2R,3S,5R)-5-(2-amino-6-oxo-6,9-dihydro-1H-purin-9-yl)-3-hydroxyoxolan-2-yl]methoxy}(hydroxy)phosphoryl)oxy]phosphonic acid
Traditional NamedGDP
CAS Registry Number102783-74-4
SMILES
NC1=NC2=C(N=CN2[C@H]2C[C@H](O)[C@@H](COP(O)(=O)OP(O)(O)=O)O2)C(=O)N1
InChI Identifier
InChI=1S/C10H15N5O10P2/c11-10-13-8-7(9(17)14-10)12-3-15(8)6-1-4(16)5(24-6)2-23-27(21,22)25-26(18,19)20/h3-6,16H,1-2H2,(H,21,22)(H2,18,19,20)(H3,11,13,14,17)/t4-,5+,6+/m0/s1
InChI KeyCIKGWCTVFSRMJU-KVQBGUIXSA-N