| MMDBm0000015 | Akkermansia muciniphila ATCC BAA-835 | Bacteria | Verrucomicrobia | Human | Metabolic reconstruction | VMH |
| MMDBm0156399 | Ustilago maydis 521 | Fungi | Basidiomycota | Not Available | Not Available | RHEA |
| MMDBm0148780 | Cryptococcus neoformans var. grubii H99 | Fungi | Basidiomycota | Not Available | Not Available | RHEA |
| MMDBm0148857 | Cryptococcus neoformans var. neoformans JEC21 | Fungi | Basidiomycota | Not Available | Not Available | RHEA |
| MMDBm0148853 | Cryptococcus neoformans var. neoformans B-3501A | Fungi | Basidiomycota | Not Available | Not Available | RHEA |
| MMDBm0002358 | Petrotoga mobilis SJ95 | Bacteria | Thermotogae | Not Available | Not Available | RHEA |
| MMDBm0001714 | Ignicoccus hospitalis KIN4/I | Archaea | Crenarchaeota | Not Available | Not Available | RHEA |
| MMDBm0001952 | Aeropyrum pernix K1 | Archaea | Crenarchaeota | Not Available | Not Available | RHEA |
| MMDBm0002577 | Staphylothermus marinus F1 | Archaea | Crenarchaeota | Not Available | Not Available | RHEA |
| MMDBm0001709 | Hyperthermus butylicus DSM 5456 | Archaea | Crenarchaeota | Not Available | Not Available | RHEA |
| MMDBm0002641 | Sulfolobus solfataricus P2 | Archaea | Crenarchaeota | Not Available | Metabolic reconstruction | VMH |
| MMDBm0002423 | Pyrococcus abyssi GE5 | Archaea | Euryarchaeota | Not Available | Not Available | RHEA |
| MMDBm0002691 | Thermococcus onnurineus NA1 | Archaea | Euryarchaeota | Not Available | Not Available | RHEA |
| MMDBm0064156 | Fusarium graminearum PH-1 | Fungi | Ascomycota | Not Available | Not Available | RHEA |
| MMDBm0080659 | Chaetomium globosum CBS 148.51 | Fungi | Ascomycota | Not Available | Not Available | RHEA |
| MMDBm0082117 | Neurospora crassa OR74A | Fungi | Ascomycota | Not Available | Not Available | RHEA |
| MMDBm0101577 | Schizosaccharomyces pombe 972h- | Fungi | Ascomycota | Not Available | Not Available | RHEA |
| MMDBm0095324 | Candida albicans SC5314 | Fungi | Ascomycota | Not Available | Not Available | RHEA |
| MMDBm0098378 | Saccharomyces cerevisiae S288C | Fungi | Ascomycota | Not Available | Not Available | RHEA |
| MMDBm0098683 | Saccharomyces pastorianus | Fungi | Ascomycota | Human Feces | Not Available | RHEA |
| MMDBm0098246 | [Candida] glabrata CBS 138 | Fungi | Ascomycota | Not Available | Not Available | RHEA |
| MMDBm0098142 | Kluyveromyces lactis NRRL Y-1140 | Fungi | Ascomycota | Not Available | Not Available | RHEA |
| MMDBm0000583 | Saccharomyces cerevisiae | Fungi | Ascomycota | Human Feces | Unknown | YMDB |
| MMDBm0098044 | Eremothecium gossypii ATCC 10895 | Fungi | Ascomycota | Not Available | Not Available | RHEA |
| MMDBm0095460 | Debaryomyces hansenii CBS767 | Fungi | Ascomycota | Not Available | Not Available | RHEA |
