MiMeDB: Showing metabocard for Uroporphyrinogen III (MMDBc0029550)

Record Information

Version

1.0

Status

Detected and Quantified

Creation Date

2021-11-17 23:31:56 UTC

Update Date

2024-04-30 19:37:45 UTC

Metabolite ID

MMDBc0029550

Metabolite Identification

Common Name

Uroporphyrinogen III

Description

Uroporphyrinogens are porphyrinogen variants in which each pyrrole ring has one acetate side chain and one propionate side chain; it is formed by condensation 4 four molecules of porphobilinogen. 4 isomers are possible but only 2 commoly are found, types I and III. Uroporphyrinogen III is a functional intermediate in heme biosynthesis while Uroporphyrinogen I is produced in an abortive side reaction.

Structure

MOL 3D MOL SDF 3D SDF PDB 3D PDB SMILES InChI


  Mrv0541 02231218552D          

 60 64  0  0  0  0            999 V2000
    0.6394   -1.6259    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3647   -2.0177    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7941   -0.8181    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0963   -1.9353    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9593   -1.4540    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4437   -2.8358    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.6052   -0.7081    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8456   -1.6534    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7499   -1.2340    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1965   -3.1728    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9387    0.0515    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5778   -2.0315    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9797   -0.8387    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    3.3378   -1.8115    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2721   -3.9943    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.6327    0.8181    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1690   -1.4540    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5847   -2.8565    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7943   -0.7184    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1317   -1.5950    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.1315   -2.6090    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.5950   -4.4721    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.0318   -4.3380    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.9559    1.5778    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8146    0.8972    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9940   -1.4678    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3030   -3.2690    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1862    0.0309    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3474    2.1174    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7809    1.5812    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6325    1.7015    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3962   -2.1862    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3065   -4.0940    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7943    0.7941    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3441    2.9493    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1865    2.2961    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0963    2.0108    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2177   -2.1965    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9734   -2.8909    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0215   -4.5030    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5778   -4.5202    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1690    1.5365    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9762    0.9212    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    2.0556    3.3618    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.0355    2.2996    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8421    1.7255    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5743    2.1105    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9940    1.5434    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0521    4.1834    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.7672    2.9528    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.4549    3.0352    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.4618    1.5709    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5674    2.9321    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4030    2.2584    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2756    3.3549    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2246    2.2619    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9872    2.9665    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2619    4.2039    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5193    4.6164    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9905    4.6370    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  0  0  0  0
  1  3  1  0  0  0  0
  1  4  1  0  0  0  0
  2  5  1  0  0  0  0
  2  6  1  0  0  0  0
  3  7  1  0  0  0  0
  4  8  1  0  0  0  0
  5  9  1  0  0  0  0
  6 10  1  0  0  0  0
  7 11  1  0  0  0  0
  8 12  2  0  0  0  0
  8 13  1  0  0  0  0
  9 14  1  0  0  0  0
 10 15  1  0  0  0  0
 11 16  1  0  0  0  0
 12 17  1  0  0  0  0
 12 18  1  0  0  0  0
 13 19  1  0  0  0  0
 14 20  1  0  0  0  0
 14 21  2  0  0  0  0
 15 22  1  0  0  0  0
 15 23  2  0  0  0  0
 16 24  2  0  0  0  0
 16 25  1  0  0  0  0
 17 26  1  0  0  0  0
 18 27  1  0  0  0  0
 19 28  1  0  0  0  0
 24 29  1  0  0  0  0
 24 30  1  0  0  0  0
 25 31  1  0  0  0  0
 26 32  1  0  0  0  0
 27 33  1  0  0  0  0
 28 34  1  0  0  0  0
 29 35  1  0  0  0  0
 30 36  1  0  0  0  0
 31 37  1  0  0  0  0
 32 38  1  0  0  0  0
 32 39  2  0  0  0  0
 33 40  1  0  0  0  0
 33 41  2  0  0  0  0
 34 42  2  0  0  0  0
 34 43  1  0  0  0  0
 35 44  1  0  0  0  0
 36 45  1  0  0  0  0
 37 46  1  0  0  0  0
 42 47  1  0  0  0  0
 42 48  1  0  0  0  0
 44 49  1  0  0  0  0
 44 50  2  0  0  0  0
 45 51  1  0  0  0  0
 45 52  2  0  0  0  0
 47 53  1  0  0  0  0
 48 54  1  0  0  0  0
 53 55  1  0  0  0  0
 54 56  1  0  0  0  0
 54 57  2  0  0  0  0
 55 58  1  0  0  0  0
 58 59  1  0  0  0  0
 58 60  2  0  0  0  0
  5  7  2  0  0  0  0
 17 19  2  0  0  0  0
 29 31  2  0  0  0  0
 43 46  1  0  0  0  0
 46 47  2  0  0  0  0
M  END

HMDB0001086
     RDKit          3D
Uroporphyrinogen III
104108  0  0  0  0  0  0  0  0999 V2000
   -7.4541   -3.5761    0.0659 O   0  0  0  0  0  0  0  0  0  0  0  0
   -6.4162   -3.6853    0.7286 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.1117   -4.8505    1.4002 O   0  0  0  0  0  0  0  0  0  0  0  0
   -5.4776   -2.5328    0.8004 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6361   -2.4762   -0.4510 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7349   -1.2635   -0.3201 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6351   -1.1004    0.5182 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1247    0.1436    0.3413 N   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8615    0.7495   -0.5862 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8994   -0.0924   -1.0430 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.9166    0.1863   -2.0910 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.2004    0.5660   -1.5034 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.9490   -0.1446   -0.8277 O   0  0  0  0  0  0  0  0  0  0  0  0
   -6.6735    1.8942   -1.7115 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7055    2.1064   -1.2329 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2906    2.6325   -1.2965 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2052    2.0186   -1.7804 N   0  0  0  0  0  0  0  0  0  0  0  0
    0.8660    2.8386   -1.5120 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4158    3.9736   -0.8628 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1818    5.1700   -0.3376 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8027    4.8391    0.9461 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.6525    3.7034    1.4380 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.5552    5.7867    1.6119 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9538    3.8589   -0.7173 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8508    4.8615   -0.0341 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0532    4.3467    1.3724 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9379    5.2423    2.1610 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2245    4.9892    3.3575 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4771    6.3853    1.6072 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.3139    2.5582   -1.7470 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8826    1.4083   -0.9345 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3919    0.1589   -0.8267 N   0  0  0  0  0  0  0  0  0  0  0  0
    3.1349   -0.5019    0.0661 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1549    0.3542    0.5471 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.2149    0.0076    1.5473 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.2751   -0.8124    0.9730 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.2325   -1.1462   -0.2299 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.3399   -1.2342    1.7402 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.9804    1.5484   -0.0932 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.8651    2.7686    0.0864 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.8054    2.8848   -1.0986 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.6472    4.0800   -0.8869 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.5303    4.7741    0.1390 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.5681    4.3771   -1.8967 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.9591   -1.9017    0.6113 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5297   -2.3925    0.7330 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4675   -1.7543    1.2320 N   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6111   -2.5486    1.0538 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2233   -3.7225    0.4354 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0653   -4.9276    0.0488 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3757   -5.7819    1.2349 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1910   -6.9261    0.8018 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5131   -7.0489   -0.3906 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5970   -7.8628    1.7224 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.1287   -3.6472    0.2215 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9897   -4.6984   -0.4225 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2898   -4.2456   -1.7949 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8366   -3.1546   -2.2093 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.0692   -4.9901   -2.6685 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0684   -2.2033    1.3823 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.8545   -5.6522    0.8130 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7721   -2.7826    1.6531 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.0141   -1.6061    1.0503 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0524   -3.4099   -0.4951 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.2650   -2.3294   -1.3326 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2782    0.5779    0.9243 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5680    0.9438   -2.8257 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1054   -0.7966   -2.6474 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.8723    2.4808   -0.9215 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1697    2.1986   -2.2315 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3685    2.7481   -0.6239 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1515    1.0610   -2.3268 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.0148    5.3875   -1.0464 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.5013    6.0232   -0.3115 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.6074    6.7549    1.3663 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8301    4.7507   -0.5842 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4767    5.8743   -0.0880 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3472    3.2883    1.3937 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0626    4.3735    1.9296 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1105    7.2703    1.9174 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.8479    3.5140   -1.4528 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.6716    2.4509   -2.7739 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.5460   -0.2625   -1.4252 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.7086   -0.5572    2.3755 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.5710    0.9388    2.0322 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.0768   -1.8450    1.3829 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.3693    2.7015    1.0481 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.2244    3.6631    0.0845 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.1386    3.0155   -1.9923 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.3793    1.9693   -1.2312 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.5597    4.2283   -1.7869 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.5060   -2.0396    1.5928 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.5558   -2.5854   -0.0451 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4674   -0.7592    1.7448 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9662   -4.5277   -0.4410 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5086   -5.4887   -0.7268 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0060   -5.2149    1.9697 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4635   -6.1039    1.7827 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0501   -8.6914    1.9565 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.5273   -5.6838   -0.3590 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.9606   -4.6426    0.1423 H   0  0  0  0  0  0  0  0  0  0  0  0
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  1  2  2  0
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 60104  1  0
M  END


  Mrv0541 02231218552D          

 60 64  0  0  0  0            999 V2000
    0.6394   -1.6259    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3647   -2.0177    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7941   -0.8181    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0963   -1.9353    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9593   -1.4540    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
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    2.1965   -3.1728    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9387    0.0515    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
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  1  2  2  0  0  0  0
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  1  4  1  0  0  0  0
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  2  6  1  0  0  0  0
  3  7  1  0  0  0  0
  4  8  1  0  0  0  0
  5  9  1  0  0  0  0
  6 10  1  0  0  0  0
  7 11  1  0  0  0  0
  8 12  2  0  0  0  0
  8 13  1  0  0  0  0
  9 14  1  0  0  0  0
 10 15  1  0  0  0  0
 11 16  1  0  0  0  0
 12 17  1  0  0  0  0
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 13 19  1  0  0  0  0
 14 20  1  0  0  0  0
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 24 29  1  0  0  0  0
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 26 32  1  0  0  0  0
 27 33  1  0  0  0  0
 28 34  1  0  0  0  0
 29 35  1  0  0  0  0
 30 36  1  0  0  0  0
 31 37  1  0  0  0  0
 32 38  1  0  0  0  0
 32 39  2  0  0  0  0
 33 40  1  0  0  0  0
 33 41  2  0  0  0  0
 34 42  2  0  0  0  0
 34 43  1  0  0  0  0
 35 44  1  0  0  0  0
 36 45  1  0  0  0  0
 37 46  1  0  0  0  0
 42 47  1  0  0  0  0
 42 48  1  0  0  0  0
 44 49  1  0  0  0  0
 44 50  2  0  0  0  0
 45 51  1  0  0  0  0
 45 52  2  0  0  0  0
 47 53  1  0  0  0  0
 48 54  1  0  0  0  0
 53 55  1  0  0  0  0
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 54 57  2  0  0  0  0
 55 58  1  0  0  0  0
 58 59  1  0  0  0  0
 58 60  2  0  0  0  0
  5  7  2  0  0  0  0
 17 19  2  0  0  0  0
 29 31  2  0  0  0  0
 43 46  1  0  0  0  0
 46 47  2  0  0  0  0
M  END
> <DATABASE_ID>
MMDBc0029550

> <DATABASE_NAME>
MIME

> <SMILES>
OC(=O)CCC1=C2CC3=C(CCC(O)=O)C(CC(O)=O)=C(CC4=C(CC(O)=O)C(CCC(O)=O)=C(CC5=C(CC(O)=O)C(CCC(O)=O)=C(CC(N2)=C1CC(O)=O)N5)N4)N3

> <INCHI_IDENTIFIER>
InChI=1S/C40H44N4O16/c45-33(46)5-1-17-21(9-37(53)54)29-14-27-19(3-7-35(49)50)22(10-38(55)56)30(43-27)15-28-20(4-8-36(51)52)24(12-40(59)60)32(44-28)16-31-23(11-39(57)58)18(2-6-34(47)48)26(42-31)13-25(17)41-29/h41-44H,1-16H2,(H,45,46)(H,47,48)(H,49,50)(H,51,52)(H,53,54)(H,55,56)(H,57,58)(H,59,60)

> <INCHI_KEY>
HUHWZXWWOFSFKF-UHFFFAOYSA-N

> <FORMULA>
C40H44N4O16

> <MOLECULAR_WEIGHT>
836.7946

> <EXACT_MASS>
836.27523138

> <JCHEM_ACCEPTOR_COUNT>
16

> <JCHEM_AVERAGE_POLARIZABILITY>
81.5514750357378

> <JCHEM_BIOAVAILABILITY>
0

> <JCHEM_DONOR_COUNT>
12

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
3-[9,14,20-tris(2-carboxyethyl)-5,10,15,19-tetrakis(carboxymethyl)-21,22,23,24-tetraazapentacyclo[16.2.1.1³,⁶.1⁸,¹¹.1¹³,¹⁶]tetracosa-1(20),3,5,8,10,13,15,18-octaen-4-yl]propanoic acid

> <ALOGPS_LOGP>
0.67

> <JCHEM_LOGP>
1.3885468186666658

> <ALOGPS_LOGS>
-4.28

> <JCHEM_MDDR_LIKE_RULE>
1

> <JCHEM_NUMBER_OF_RINGS>
5

> <JCHEM_PHYSIOLOGICAL_CHARGE>
-8

> <JCHEM_PKA>
3.5861502444706224

> <JCHEM_PKA_STRONGEST_ACIDIC>
3.2116775904243284

> <JCHEM_POLAR_SURFACE_AREA>
361.55999999999995

> <JCHEM_REFRACTIVITY>
206.9264000000002

> <JCHEM_ROTATABLE_BOND_COUNT>
20

> <JCHEM_RULE_OF_FIVE>
0

> <ALOGPS_SOLUBILITY>
4.37e-02 g/l

> <JCHEM_TRADITIONAL_IUPAC>
uroporphyrinogen-III

> <JCHEM_VEBER_RULE>
0

$$$$

HMDB0001086
     RDKit          3D
Uroporphyrinogen III
104108  0  0  0  0  0  0  0  0999 V2000
   -7.4541   -3.5761    0.0659 O   0  0  0  0  0  0  0  0  0  0  0  0
   -6.4162   -3.6853    0.7286 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.1117   -4.8505    1.4002 O   0  0  0  0  0  0  0  0  0  0  0  0
   -5.4776   -2.5328    0.8004 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6361   -2.4762   -0.4510 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7349   -1.2635   -0.3201 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6351   -1.1004    0.5182 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1247    0.1436    0.3413 N   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8615    0.7495   -0.5862 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8994   -0.0924   -1.0430 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.9166    0.1863   -2.0910 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.2004    0.5660   -1.5034 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.9490   -0.1446   -0.8277 O   0  0  0  0  0  0  0  0  0  0  0  0
   -6.6735    1.8942   -1.7115 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7055    2.1064   -1.2329 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2906    2.6325   -1.2965 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2052    2.0186   -1.7804 N   0  0  0  0  0  0  0  0  0  0  0  0
    0.8660    2.8386   -1.5120 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4158    3.9736   -0.8628 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1818    5.1700   -0.3376 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8027    4.8391    0.9461 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.6525    3.7034    1.4380 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.5552    5.7867    1.6119 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9538    3.8589   -0.7173 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8508    4.8615   -0.0341 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0532    4.3467    1.3724 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9379    5.2423    2.1610 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2245    4.9892    3.3575 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4771    6.3853    1.6072 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.3139    2.5582   -1.7470 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8826    1.4083   -0.9345 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3919    0.1589   -0.8267 N   0  0  0  0  0  0  0  0  0  0  0  0
    3.1349   -0.5019    0.0661 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1549    0.3542    0.5471 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.2149    0.0076    1.5473 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.2751   -0.8124    0.9730 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.2325   -1.1462   -0.2299 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.3399   -1.2342    1.7402 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.9804    1.5484   -0.0932 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.8651    2.7686    0.0864 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.8054    2.8848   -1.0986 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.6472    4.0800   -0.8869 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.5303    4.7741    0.1390 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.5681    4.3771   -1.8967 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.9591   -1.9017    0.6113 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5297   -2.3925    0.7330 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4675   -1.7543    1.2320 N   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6111   -2.5486    1.0538 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2233   -3.7225    0.4354 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0653   -4.9276    0.0488 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3757   -5.7819    1.2349 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1910   -6.9261    0.8018 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5131   -7.0489   -0.3906 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5970   -7.8628    1.7224 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.1287   -3.6472    0.2215 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9897   -4.6984   -0.4225 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2898   -4.2456   -1.7949 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8366   -3.1546   -2.2093 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.0692   -4.9901   -2.6685 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0684   -2.2033    1.3823 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.8545   -5.6522    0.8130 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7721   -2.7826    1.6531 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.0141   -1.6061    1.0503 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0524   -3.4099   -0.4951 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.2650   -2.3294   -1.3326 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2782    0.5779    0.9243 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5680    0.9438   -2.8257 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1054   -0.7966   -2.6474 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.8723    2.4808   -0.9215 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1697    2.1986   -2.2315 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3685    2.7481   -0.6239 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1515    1.0610   -2.3268 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.0148    5.3875   -1.0464 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.5013    6.0232   -0.3115 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.6074    6.7549    1.3663 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8301    4.7507   -0.5842 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4767    5.8743   -0.0880 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3472    3.2883    1.3937 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0626    4.3735    1.9296 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1105    7.2703    1.9174 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.8479    3.5140   -1.4528 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.6716    2.4509   -2.7739 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.5460   -0.2625   -1.4252 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.7086   -0.5572    2.3755 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.5710    0.9388    2.0322 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.0768   -1.8450    1.3829 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.3693    2.7015    1.0481 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.2244    3.6631    0.0845 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.1386    3.0155   -1.9923 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.3793    1.9693   -1.2312 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.5597    4.2283   -1.7869 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.5060   -2.0396    1.5928 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.5558   -2.5854   -0.0451 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4674   -0.7592    1.7448 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9662   -4.5277   -0.4410 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5086   -5.4887   -0.7268 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0060   -5.2149    1.9697 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4635   -6.1039    1.7827 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0501   -8.6914    1.9565 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.5273   -5.6838   -0.3590 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.9606   -4.6426    0.1423 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.3615   -5.9317   -2.4033 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3131   -2.1751    2.4349 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6365   -3.1188    1.0589 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  0
  2  3  1  0
  2  4  1  0
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M  END

HEADER    PROTEIN                                 23-FEB-12   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   23-FEB-12         0                                  
HETATM    1  C   UNK     0       1.194  -3.035   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       2.547  -3.766   0.000  0.00  0.00           C+0
HETATM    3  N   UNK     0       1.482  -1.527   0.000  0.00  0.00           N+0
HETATM    4  C   UNK     0      -0.180  -3.613   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       3.657  -2.714   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       2.695  -5.293   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       2.996  -1.322   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0      -1.578  -3.086   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0       5.133  -2.303   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       4.100  -5.923   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       3.619   0.096   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0      -2.945  -3.792   0.000  0.00  0.00           C+0
HETATM   13  N   UNK     0      -1.829  -1.566   0.000  0.00  0.00           N+0
HETATM   14  C   UNK     0       6.231  -3.381   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0       4.241  -7.456   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0       3.048   1.527   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0      -4.049  -2.714   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0      -2.958  -5.332   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0      -3.349  -1.341   0.000  0.00  0.00           C+0
HETATM   20  O   UNK     0       7.713  -2.977   0.000  0.00  0.00           O+0
HETATM   21  O   UNK     0       5.845  -4.870   0.000  0.00  0.00           O+0
HETATM   22  O   UNK     0       2.977  -8.348   0.000  0.00  0.00           O+0
HETATM   23  O   UNK     0       5.659  -8.098   0.000  0.00  0.00           O+0
HETATM   24  C   UNK     0       3.651   2.945   0.000  0.00  0.00           C+0
HETATM   25  N   UNK     0       1.521   1.675   0.000  0.00  0.00           N+0
HETATM   26  C   UNK     0      -5.589  -2.740   0.000  0.00  0.00           C+0
HETATM   27  C   UNK     0      -4.299  -6.102   0.000  0.00  0.00           C+0
HETATM   28  C   UNK     0      -4.081   0.058   0.000  0.00  0.00           C+0
HETATM   29  C   UNK     0       2.515   3.952   0.000  0.00  0.00           C+0
HETATM   30  C   UNK     0       5.191   2.952   0.000  0.00  0.00           C+0
HETATM   31  C   UNK     0       1.181   3.176   0.000  0.00  0.00           C+0
HETATM   32  C   UNK     0      -6.340  -4.081   0.000  0.00  0.00           C+0
HETATM   33  C   UNK     0      -4.305  -7.642   0.000  0.00  0.00           C+0
HETATM   34  C   UNK     0      -3.349   1.482   0.000  0.00  0.00           C+0
HETATM   35  C   UNK     0       2.509   5.505   0.000  0.00  0.00           C+0
HETATM   36  C   UNK     0       5.948   4.286   0.000  0.00  0.00           C+0
HETATM   37  C   UNK     0      -0.180   3.753   0.000  0.00  0.00           C+0
HETATM   38  O   UNK     0      -7.873  -4.100   0.000  0.00  0.00           O+0
HETATM   39  O   UNK     0      -5.550  -5.396   0.000  0.00  0.00           O+0
HETATM   40  O   UNK     0      -5.640  -8.406   0.000  0.00  0.00           O+0
HETATM   41  O   UNK     0      -2.945  -8.438   0.000  0.00  0.00           O+0
HETATM   42  C   UNK     0      -4.049   2.868   0.000  0.00  0.00           C+0
HETATM   43  N   UNK     0      -1.822   1.720   0.000  0.00  0.00           N+0
HETATM   44  C   UNK     0       3.837   6.275   0.000  0.00  0.00           C+0
HETATM   45  C   UNK     0       7.533   4.293   0.000  0.00  0.00           C+0
HETATM   46  C   UNK     0      -1.572   3.221   0.000  0.00  0.00           C+0
HETATM   47  C   UNK     0      -2.939   3.940   0.000  0.00  0.00           C+0
HETATM   48  C   UNK     0      -5.589   2.881   0.000  0.00  0.00           C+0
HETATM   49  O   UNK     0       3.831   7.809   0.000  0.00  0.00           O+0
HETATM   50  O   UNK     0       5.165   5.512   0.000  0.00  0.00           O+0
HETATM   51  O   UNK     0       8.316   5.666   0.000  0.00  0.00           O+0
HETATM   52  O   UNK     0       8.329   2.932   0.000  0.00  0.00           O+0
HETATM   53  C   UNK     0      -2.926   5.473   0.000  0.00  0.00           C+0
HETATM   54  C   UNK     0      -6.352   4.216   0.000  0.00  0.00           C+0
HETATM   55  C   UNK     0      -4.248   6.262   0.000  0.00  0.00           C+0
HETATM   56  O   UNK     0      -7.886   4.222   0.000  0.00  0.00           O+0
HETATM   57  O   UNK     0      -5.576   5.537   0.000  0.00  0.00           O+0
HETATM   58  C   UNK     0      -4.222   7.847   0.000  0.00  0.00           C+0
HETATM   59  O   UNK     0      -2.836   8.617   0.000  0.00  0.00           O+0
HETATM   60  O   UNK     0      -5.582   8.656   0.000  0.00  0.00           O+0
CONECT    1    2    3    4                                                  
CONECT    2    1    5    6                                                  
CONECT    3    1    7                                                       
CONECT    4    1    8                                                       
CONECT    5    2    9    7                                                  
CONECT    6    2   10                                                       
CONECT    7    3   11    5                                                  
CONECT    8    4   12   13                                                  
CONECT    9    5   14                                                       
CONECT   10    6   15                                                       
CONECT   11    7   16                                                       
CONECT   12    8   17   18                                                  
CONECT   13    8   19                                                       
CONECT   14    9   20   21                                                  
CONECT   15   10   22   23                                                  
CONECT   16   11   24   25                                                  
CONECT   17   12   26   19                                                  
CONECT   18   12   27                                                       
CONECT   19   13   28   17                                                  
CONECT   20   14                                                            
CONECT   21   14                                                            
CONECT   22   15                                                            
CONECT   23   15                                                            
CONECT   24   16   29   30                                                  
CONECT   25   16   31                                                       
CONECT   26   17   32                                                       
CONECT   27   18   33                                                       
CONECT   28   19   34                                                       
CONECT   29   24   35   31                                                  
CONECT   30   24   36                                                       
CONECT   31   25   37   29                                                  
CONECT   32   26   38   39                                                  
CONECT   33   27   40   41                                                  
CONECT   34   28   42   43                                                  
CONECT   35   29   44                                                       
CONECT   36   30   45                                                       
CONECT   37   31   46                                                       
CONECT   38   32                                                            
CONECT   39   32                                                            
CONECT   40   33                                                            
CONECT   41   33                                                            
CONECT   42   34   47   48                                                  
CONECT   43   34   46                                                       
CONECT   44   35   49   50                                                  
CONECT   45   36   51   52                                                  
CONECT   46   37   43   47                                                  
CONECT   47   42   53   46                                                  
CONECT   48   42   54                                                       
CONECT   49   44                                                            
CONECT   50   44                                                            
CONECT   51   45                                                            
CONECT   52   45                                                            
CONECT   53   47   55                                                       
CONECT   54   48   56   57                                                  
CONECT   55   53   58                                                       
CONECT   56   54                                                            
CONECT   57   54                                                            
CONECT   58   55   59   60                                                  
CONECT   59   58                                                            
CONECT   60   58                                                            
MASTER        0    0    0    0    0    0    0    0   60    0  128    0
END

COMPND    HMDB0001086
HETATM    1  O1  UNL     1      -7.454  -3.576   0.066  1.00  0.00           O  
HETATM    2  C1  UNL     1      -6.416  -3.685   0.729  1.00  0.00           C  
HETATM    3  O2  UNL     1      -6.112  -4.850   1.400  1.00  0.00           O  
HETATM    4  C2  UNL     1      -5.478  -2.533   0.800  1.00  0.00           C  
HETATM    5  C3  UNL     1      -4.636  -2.476  -0.451  1.00  0.00           C  
HETATM    6  C4  UNL     1      -3.735  -1.264  -0.320  1.00  0.00           C  
HETATM    7  C5  UNL     1      -2.635  -1.100   0.518  1.00  0.00           C  
HETATM    8  N1  UNL     1      -2.125   0.144   0.341  1.00  0.00           N  
HETATM    9  C6  UNL     1      -2.862   0.750  -0.586  1.00  0.00           C  
HETATM   10  C7  UNL     1      -3.899  -0.092  -1.043  1.00  0.00           C  
HETATM   11  C8  UNL     1      -4.917   0.186  -2.091  1.00  0.00           C  
HETATM   12  C9  UNL     1      -6.200   0.566  -1.503  1.00  0.00           C  
HETATM   13  O3  UNL     1      -6.949  -0.145  -0.828  1.00  0.00           O  
HETATM   14  O4  UNL     1      -6.674   1.894  -1.711  1.00  0.00           O  
HETATM   15  C10 UNL     1      -2.706   2.106  -1.233  1.00  0.00           C  
HETATM   16  C11 UNL     1      -1.291   2.632  -1.297  1.00  0.00           C  
HETATM   17  N2  UNL     1      -0.205   2.019  -1.780  1.00  0.00           N  
HETATM   18  C12 UNL     1       0.866   2.839  -1.512  1.00  0.00           C  
HETATM   19  C13 UNL     1       0.416   3.974  -0.863  1.00  0.00           C  
HETATM   20  C14 UNL     1       1.182   5.170  -0.338  1.00  0.00           C  
HETATM   21  C15 UNL     1       1.803   4.839   0.946  1.00  0.00           C  
HETATM   22  O5  UNL     1       1.653   3.703   1.438  1.00  0.00           O  
HETATM   23  O6  UNL     1       2.555   5.787   1.612  1.00  0.00           O  
HETATM   24  C16 UNL     1      -0.954   3.859  -0.717  1.00  0.00           C  
HETATM   25  C17 UNL     1      -1.851   4.862  -0.034  1.00  0.00           C  
HETATM   26  C18 UNL     1      -2.053   4.347   1.372  1.00  0.00           C  
HETATM   27  C19 UNL     1      -2.938   5.242   2.161  1.00  0.00           C  
HETATM   28  O7  UNL     1      -3.225   4.989   3.357  1.00  0.00           O  
HETATM   29  O8  UNL     1      -3.477   6.385   1.607  1.00  0.00           O  
HETATM   30  C20 UNL     1       2.314   2.558  -1.747  1.00  0.00           C  
HETATM   31  C21 UNL     1       2.883   1.408  -0.934  1.00  0.00           C  
HETATM   32  N3  UNL     1       2.392   0.159  -0.827  1.00  0.00           N  
HETATM   33  C22 UNL     1       3.135  -0.502   0.066  1.00  0.00           C  
HETATM   34  C23 UNL     1       4.155   0.354   0.547  1.00  0.00           C  
HETATM   35  C24 UNL     1       5.215   0.008   1.547  1.00  0.00           C  
HETATM   36  C25 UNL     1       6.275  -0.812   0.973  1.00  0.00           C  
HETATM   37  O9  UNL     1       6.232  -1.146  -0.230  1.00  0.00           O  
HETATM   38  O10 UNL     1       7.340  -1.234   1.740  1.00  0.00           O  
HETATM   39  C26 UNL     1       3.980   1.548  -0.093  1.00  0.00           C  
HETATM   40  C27 UNL     1       4.865   2.769   0.086  1.00  0.00           C  
HETATM   41  C28 UNL     1       5.805   2.885  -1.099  1.00  0.00           C  
HETATM   42  C29 UNL     1       6.647   4.080  -0.887  1.00  0.00           C  
HETATM   43  O11 UNL     1       6.530   4.774   0.139  1.00  0.00           O  
HETATM   44  O12 UNL     1       7.568   4.377  -1.897  1.00  0.00           O  
HETATM   45  C30 UNL     1       2.959  -1.902   0.611  1.00  0.00           C  
HETATM   46  C31 UNL     1       1.530  -2.392   0.733  1.00  0.00           C  
HETATM   47  N4  UNL     1       0.468  -1.754   1.232  1.00  0.00           N  
HETATM   48  C32 UNL     1      -0.611  -2.549   1.054  1.00  0.00           C  
HETATM   49  C33 UNL     1      -0.223  -3.723   0.435  1.00  0.00           C  
HETATM   50  C34 UNL     1      -1.065  -4.928   0.049  1.00  0.00           C  
HETATM   51  C35 UNL     1      -1.376  -5.782   1.235  1.00  0.00           C  
HETATM   52  C36 UNL     1      -2.191  -6.926   0.802  1.00  0.00           C  
HETATM   53  O13 UNL     1      -2.513  -7.049  -0.391  1.00  0.00           O  
HETATM   54  O14 UNL     1      -2.597  -7.863   1.722  1.00  0.00           O  
HETATM   55  C37 UNL     1       1.129  -3.647   0.222  1.00  0.00           C  
HETATM   56  C38 UNL     1       1.990  -4.698  -0.423  1.00  0.00           C  
HETATM   57  C39 UNL     1       2.290  -4.246  -1.795  1.00  0.00           C  
HETATM   58  O15 UNL     1       1.837  -3.155  -2.209  1.00  0.00           O  
HETATM   59  O16 UNL     1       3.069  -4.990  -2.669  1.00  0.00           O  
HETATM   60  C40 UNL     1      -2.068  -2.203   1.382  1.00  0.00           C  
HETATM   61  H1  UNL     1      -5.854  -5.652   0.813  1.00  0.00           H  
HETATM   62  H2  UNL     1      -4.772  -2.783   1.653  1.00  0.00           H  
HETATM   63  H3  UNL     1      -6.014  -1.606   1.050  1.00  0.00           H  
HETATM   64  H4  UNL     1      -4.052  -3.410  -0.495  1.00  0.00           H  
HETATM   65  H5  UNL     1      -5.265  -2.329  -1.333  1.00  0.00           H  
HETATM   66  H6  UNL     1      -1.278   0.578   0.924  1.00  0.00           H  
HETATM   67  H7  UNL     1      -4.568   0.944  -2.826  1.00  0.00           H  
HETATM   68  H8  UNL     1      -5.105  -0.797  -2.647  1.00  0.00           H  
HETATM   69  H9  UNL     1      -6.872   2.481  -0.922  1.00  0.00           H  
HETATM   70  H10 UNL     1      -3.170   2.199  -2.232  1.00  0.00           H  
HETATM   71  H11 UNL     1      -3.368   2.748  -0.624  1.00  0.00           H  
HETATM   72  H12 UNL     1      -0.152   1.061  -2.327  1.00  0.00           H  
HETATM   73  H13 UNL     1       2.015   5.387  -1.046  1.00  0.00           H  
HETATM   74  H14 UNL     1       0.501   6.023  -0.312  1.00  0.00           H  
HETATM   75  H15 UNL     1       2.607   6.755   1.366  1.00  0.00           H  
HETATM   76  H16 UNL     1      -2.830   4.751  -0.584  1.00  0.00           H  
HETATM   77  H17 UNL     1      -1.477   5.874  -0.088  1.00  0.00           H  
HETATM   78  H18 UNL     1      -2.347   3.288   1.394  1.00  0.00           H  
HETATM   79  H19 UNL     1      -1.063   4.374   1.930  1.00  0.00           H  
HETATM   80  H20 UNL     1      -3.110   7.270   1.917  1.00  0.00           H  
HETATM   81  H21 UNL     1       2.848   3.514  -1.453  1.00  0.00           H  
HETATM   82  H22 UNL     1       2.672   2.451  -2.774  1.00  0.00           H  
HETATM   83  H23 UNL     1       1.546  -0.262  -1.425  1.00  0.00           H  
HETATM   84  H24 UNL     1       4.709  -0.557   2.376  1.00  0.00           H  
HETATM   85  H25 UNL     1       5.571   0.939   2.032  1.00  0.00           H  
HETATM   86  H26 UNL     1       8.077  -1.845   1.383  1.00  0.00           H  
HETATM   87  H27 UNL     1       5.369   2.701   1.048  1.00  0.00           H  
HETATM   88  H28 UNL     1       4.224   3.663   0.084  1.00  0.00           H  
HETATM   89  H29 UNL     1       5.139   3.015  -1.992  1.00  0.00           H  
HETATM   90  H30 UNL     1       6.379   1.969  -1.231  1.00  0.00           H  
HETATM   91  H31 UNL     1       8.560   4.228  -1.787  1.00  0.00           H  
HETATM   92  H32 UNL     1       3.506  -2.040   1.593  1.00  0.00           H  
HETATM   93  H33 UNL     1       3.556  -2.585  -0.045  1.00  0.00           H  
HETATM   94  H34 UNL     1       0.467  -0.759   1.745  1.00  0.00           H  
HETATM   95  H35 UNL     1      -1.966  -4.528  -0.441  1.00  0.00           H  
HETATM   96  H36 UNL     1      -0.509  -5.489  -0.727  1.00  0.00           H  
HETATM   97  H37 UNL     1      -2.006  -5.215   1.970  1.00  0.00           H  
HETATM   98  H38 UNL     1      -0.464  -6.104   1.783  1.00  0.00           H  
HETATM   99  H39 UNL     1      -2.050  -8.691   1.956  1.00  0.00           H  
HETATM  100  H40 UNL     1       1.527  -5.684  -0.359  1.00  0.00           H  
HETATM  101  H41 UNL     1       2.961  -4.643   0.142  1.00  0.00           H  
HETATM  102  H42 UNL     1       3.361  -5.932  -2.403  1.00  0.00           H  
HETATM  103  H43 UNL     1      -2.313  -2.175   2.435  1.00  0.00           H  
HETATM  104  H44 UNL     1      -2.636  -3.119   1.059  1.00  0.00           H  
CONECT    1    2    2
CONECT    2    3    4
CONECT    3   61
CONECT    4    5   62   63
CONECT    5    6   64   65
CONECT    6    7    7   10
CONECT    7    8   60
CONECT    8    9   66
CONECT    9   10   10   15
CONECT   10   11
CONECT   11   12   67   68
CONECT   12   13   13   14
CONECT   14   69
CONECT   15   16   70   71
CONECT   16   17   24   24
CONECT   17   18   72
CONECT   18   19   19   30
CONECT   19   20   24
CONECT   20   21   73   74
CONECT   21   22   22   23
CONECT   23   75
CONECT   24   25
CONECT   25   26   76   77
CONECT   26   27   78   79
CONECT   27   28   28   29
CONECT   29   80
CONECT   30   31   81   82
CONECT   31   32   39   39
CONECT   32   33   83
CONECT   33   34   34   45
CONECT   34   35   39
CONECT   35   36   84   85
CONECT   36   37   37   38
CONECT   38   86
CONECT   39   40
CONECT   40   41   87   88
CONECT   41   42   89   90
CONECT   42   43   43   44
CONECT   44   91
CONECT   45   46   92   93
CONECT   46   47   55   55
CONECT   47   48   94
CONECT   48   49   49   60
CONECT   49   50   55
CONECT   50   51   95   96
CONECT   51   52   97   98
CONECT   52   53   53   54
CONECT   54   99
CONECT   55   56
CONECT   56   57  100  101
CONECT   57   58   58   59
CONECT   59  102
CONECT   60  103  104
END

HMDB0001086
     RDKit          3D
Uroporphyrinogen III
104108  0  0  0  0  0  0  0  0999 V2000
   -7.4541   -3.5761    0.0659 O   0  0  0  0  0  0  0  0  0  0  0  0
   -6.4162   -3.6853    0.7286 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.1117   -4.8505    1.4002 O   0  0  0  0  0  0  0  0  0  0  0  0
   -5.4776   -2.5328    0.8004 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6361   -2.4762   -0.4510 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7349   -1.2635   -0.3201 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6351   -1.1004    0.5182 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1247    0.1436    0.3413 N   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8615    0.7495   -0.5862 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8994   -0.0924   -1.0430 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.9166    0.1863   -2.0910 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.2004    0.5660   -1.5034 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.9490   -0.1446   -0.8277 O   0  0  0  0  0  0  0  0  0  0  0  0
   -6.6735    1.8942   -1.7115 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7055    2.1064   -1.2329 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2906    2.6325   -1.2965 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2052    2.0186   -1.7804 N   0  0  0  0  0  0  0  0  0  0  0  0
    0.8660    2.8386   -1.5120 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4158    3.9736   -0.8628 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1818    5.1700   -0.3376 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8027    4.8391    0.9461 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.6525    3.7034    1.4380 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.5552    5.7867    1.6119 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9538    3.8589   -0.7173 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8508    4.8615   -0.0341 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0532    4.3467    1.3724 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9379    5.2423    2.1610 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2245    4.9892    3.3575 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4771    6.3853    1.6072 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.3139    2.5582   -1.7470 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8826    1.4083   -0.9345 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3919    0.1589   -0.8267 N   0  0  0  0  0  0  0  0  0  0  0  0
    3.1349   -0.5019    0.0661 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1549    0.3542    0.5471 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.2149    0.0076    1.5473 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.2751   -0.8124    0.9730 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.2325   -1.1462   -0.2299 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.3399   -1.2342    1.7402 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.9804    1.5484   -0.0932 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.8651    2.7686    0.0864 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.8054    2.8848   -1.0986 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.6472    4.0800   -0.8869 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.5303    4.7741    0.1390 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.5681    4.3771   -1.8967 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.9591   -1.9017    0.6113 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5297   -2.3925    0.7330 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4675   -1.7543    1.2320 N   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6111   -2.5486    1.0538 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2233   -3.7225    0.4354 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0653   -4.9276    0.0488 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3757   -5.7819    1.2349 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1910   -6.9261    0.8018 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5131   -7.0489   -0.3906 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5970   -7.8628    1.7224 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.1287   -3.6472    0.2215 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9897   -4.6984   -0.4225 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2898   -4.2456   -1.7949 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8366   -3.1546   -2.2093 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.0692   -4.9901   -2.6685 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0684   -2.2033    1.3823 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.8545   -5.6522    0.8130 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7721   -2.7826    1.6531 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.0141   -1.6061    1.0503 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0524   -3.4099   -0.4951 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.2650   -2.3294   -1.3326 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2782    0.5779    0.9243 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5680    0.9438   -2.8257 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1054   -0.7966   -2.6474 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.8723    2.4808   -0.9215 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1697    2.1986   -2.2315 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3685    2.7481   -0.6239 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1515    1.0610   -2.3268 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.0148    5.3875   -1.0464 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.5013    6.0232   -0.3115 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.6074    6.7549    1.3663 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8301    4.7507   -0.5842 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4767    5.8743   -0.0880 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3472    3.2883    1.3937 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0626    4.3735    1.9296 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1105    7.2703    1.9174 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.8479    3.5140   -1.4528 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.6716    2.4509   -2.7739 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.5460   -0.2625   -1.4252 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.7086   -0.5572    2.3755 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.5710    0.9388    2.0322 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.0768   -1.8450    1.3829 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.3693    2.7015    1.0481 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.2244    3.6631    0.0845 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.1386    3.0155   -1.9923 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.3793    1.9693   -1.2312 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.5597    4.2283   -1.7869 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.5060   -2.0396    1.5928 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.5558   -2.5854   -0.0451 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4674   -0.7592    1.7448 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9662   -4.5277   -0.4410 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5086   -5.4887   -0.7268 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0060   -5.2149    1.9697 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4635   -6.1039    1.7827 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0501   -8.6914    1.9565 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.5273   -5.6838   -0.3590 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.9606   -4.6426    0.1423 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.3615   -5.9317   -2.4033 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3131   -2.1751    2.4349 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6365   -3.1188    1.0589 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  0
  2  3  1  0
  2  4  1  0
  4  5  1  0
  5  6  1  0
  6  7  2  0
  7  8  1  0
  8  9  1  0
  9 10  2  0
 10 11  1  0
 11 12  1  0
 12 13  2  0
 12 14  1  0
  9 15  1  0
 15 16  1  0
 16 17  1  0
 17 18  1  0
 18 19  2  0
 19 20  1  0
 20 21  1  0
 21 22  2  0
 21 23  1  0
 19 24  1  0
 24 25  1  0
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 26 27  1  0
 27 28  2  0
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 18 30  1  0
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 31 32  1  0
 32 33  1  0
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 34 35  1  0
 35 36  1  0
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 17 72  1  0
 20 73  1  0
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 26 79  1  0
 29 80  1  0
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 32 83  1  0
 35 84  1  0
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 38 86  1  0
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 45 93  1  0
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 50 95  1  0
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 51 97  1  0
 51 98  1  0
 54 99  1  0
 56100  1  0
 56101  1  0
 59102  1  0
 60103  1  0
 60104  1  0
M  END

Synonyms

Value	Source
3,8,13,17-Tetrakis(carboxymethyl)-5,10,15,20,22,24-hexahydro-21H,23H-porphine-2,7,12,18-tetrapropanoic acid	ChEBI
3,8,13,17-Tetrakis(carboxymethyl)-5,10,15,20,22,24-hexahydroporphyrin-2,7,12,18-tetrapropionic acid	ChEBI
Uro'gen III	ChEBI
3,8,13,17-Tetrakis(carboxymethyl)-5,10,15,20,22,24-hexahydro-21H,23H-porphine-2,7,12,18-tetrapropanoate	Generator
3,8,13,17-Tetrakis(carboxymethyl)-5,10,15,20,22,24-hexahydroporphyrin-2,7,12,18-tetrapropionate	Generator
Uroporphyrinogens	MeSH
3,8,13,17-Tetrakis(carboxymethyl)-5,10,15,20,22,24-hexahydro-2,7,12,18-porphinetetrapropionate	HMDB
3,8,13,17-Tetrakis(carboxymethyl)-5,10,15,20,22,24-hexahydro-2,7,12,18-porphinetetrapropionic acid	HMDB
3,8,13,17-Tetrakis(carboxymethyl)-5,10,15,20,22,24-hexahydroporphyrin-2,7,12,18-tetrapropanoate	HMDB
3,8,13,17-Tetrakis(carboxymethyl)-5,10,15,20,22,24-hexahydroporphyrin-2,7,12,18-tetrapropanoic acid	HMDB
Urogen III	HMDB
Uroporphyrinogen-III	HMDB

Molecular Formula

C₄₀H₄₄N₄O₁₆

Average Mass

836.7946

Monoisotopic Mass

836.27523138

IUPAC Name

3-[9,14,20-tris(2-carboxyethyl)-5,10,15,19-tetrakis(carboxymethyl)-21,22,23,24-tetraazapentacyclo[16.2.1.1³,⁶.1⁸,¹¹.1¹³,¹⁶]tetracosa-1(20),3,5,8,10,13,15,18-octaen-4-yl]propanoic acid

Traditional Name

uroporphyrinogen-III

CAS Registry Number

1976-85-8

SMILES

OC(=O)CCC1=C2CC3=C(CCC(O)=O)C(CC(O)=O)=C(CC4=C(CC(O)=O)C(CCC(O)=O)=C(CC5=C(CC(O)=O)C(CCC(O)=O)=C(CC(N2)=C1CC(O)=O)N5)N4)N3

InChI Identifier

InChI=1S/C40H44N4O16/c45-33(46)5-1-17-21(9-37(53)54)29-14-27-19(3-7-35(49)50)22(10-38(55)56)30(43-27)15-28-20(4-8-36(51)52)24(12-40(59)60)32(44-28)16-31-23(11-39(57)58)18(2-6-34(47)48)26(42-31)13-25(17)41-29/h41-44H,1-16H2,(H,45,46)(H,47,48)(H,49,50)(H,51,52)(H,53,54)(H,55,56)(H,57,58)(H,59,60)

InChI Key

HUHWZXWWOFSFKF-UHFFFAOYSA-N

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as porphyrins. Porphyrins are compounds containing a fundamental skeleton of four pyrrole nuclei united through the alpha-positions by four methine groups to form a macrocyclic structure.

Kingdom

Organic compounds

Super Class

Organoheterocyclic compounds

Class

Tetrapyrroles and derivatives

Sub Class

Porphyrins

Direct Parent

Porphyrins

Alternative Parents

Substituents

Porphyrin
Substituted pyrrole
Pyrrole
Heteroaromatic compound
Carboxylic acid derivative
Carboxylic acid
Azacycle
Carbonyl group
Hydrocarbon derivative
Organic oxide
Organopnictogen compound
Organooxygen compound
Organonitrogen compound
Organic oxygen compound
Organic nitrogen compound
Aromatic heteropolycyclic compound

Molecular Framework

Aromatic heteropolycyclic compounds

External Descriptors

uroporphyrinogen (CHEBI:15437 )

Functional Ontology

Not Available

Physical Properties

State

Solid

Predicted Properties

Property	Value	Source
Water Solubility	0.044 g/L	ALOGPS
logP	0.67	ALOGPS
logP	1.39	ChemAxon
logS	-4.3	ALOGPS
pKa (Strongest Acidic)	3.21	ChemAxon
Physiological Charge	-8	ChemAxon
Hydrogen Acceptor Count	16	ChemAxon
Hydrogen Donor Count	12	ChemAxon
Polar Surface Area	361.56 Å²	ChemAxon
Rotatable Bond Count	20	ChemAxon
Refractivity	206.93 m³·mol⁻¹	ChemAxon
Polarizability	81.55 Å³	ChemAxon
Number of Rings	5	ChemAxon
Bioavailability	No	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	Yes	ChemAxon

Spectra

Spectrum Type	Description	Splash Key	Deposition Date	View
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 10V, Positive	splash10-106r-0000000980-8aa242b9a95e3ad92890	2015-09-15	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 20V, Positive	splash10-05fr-0000000910-5ea901953b2295eabfb6	2015-09-15	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 40V, Positive	splash10-0ab9-0000000900-fe3587925504317b1a70	2015-09-15	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 10V, Negative	splash10-00xr-0000000930-6a464d08b50b7b5e266c	2015-09-15	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 20V, Negative	splash10-00di-0000000910-22d2fcd94b453076587d	2015-09-15	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 40V, Negative	splash10-00di-2000000900-342f06471315f49e3deb	2015-09-15	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 10V, Positive	splash10-00xr-0000000950-9b8035c556d329d65d92	2021-09-22	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 20V, Positive	splash10-008a-0000000900-ca31eaf24646ca5e9004	2021-09-22	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 40V, Positive	splash10-0032-0000000900-42e2c47ece780e68ce9c	2021-09-22	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 10V, Negative	splash10-00dj-0000000900-efbf6751227445074375	2021-09-22	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 20V, Negative	splash10-0002-0000000900-1faa99e113ce7b175d67	2021-09-22	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 40V, Negative	splash10-00kb-0000000900-479f518906c52f496e89	2021-09-22	View Spectrum
MS	Mass Spectrum (Electron Ionization)	Not Available	2022-08-06	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 100 MHz, H₂O, predicted)		2022-08-23	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)		2022-08-23	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 1000 MHz, H₂O, predicted)		2022-08-23	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)		2022-08-23	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 200 MHz, H₂O, predicted)		2022-08-23	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)		2022-08-23	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 300 MHz, H₂O, predicted)		2022-08-23	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)		2022-08-23	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 400 MHz, H₂O, predicted)		2022-08-23	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)		2022-08-23	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 500 MHz, H₂O, predicted)		2022-08-23	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)		2022-08-23	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 600 MHz, H₂O, predicted)		2022-08-23	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)		2022-08-23	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 700 MHz, H₂O, predicted)		2022-08-23	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)		2022-08-23	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 800 MHz, H₂O, predicted)		2022-08-23	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)		2022-08-23	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 900 MHz, H₂O, predicted)		2022-08-23	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)		2022-08-23	View Spectrum

Biological Properties

Cellular Locations

Cytoplasm

Biospecimen Locations

Feces

Tissue Locations

Not Available

Associated OMIM IDs

114500 (Colorectal cancer)
610247 (Eosinophilic esophagitis)

Human Proteins and Enzymes

Protein ID	Protein Name	Protein Type	Uniprot ID	Species
MMDBp0191920	Uroporphyrinogen decarboxylase	Unknown	P06132	Homo sapiens
MMDBp0192025	Uroporphyrinogen-III synthase	Unknown	P10746	Homo sapiens

Human Pathways

Pathways

Name	SMPDB/PathBank

Metabolic Reactions

Reaction ID	Precursor	Product	Enzyme	Reaction Type	Data Source	Reference
MMDBr0004483	Uroporphyrinogen III	Uroporphyrin III	Not Available	RE3053C	VMH	11281297
MMDBr0004973	Uroporphyrinogen III	Uroporphyrin I	Not Available	RE3637C	VMH	11281297
MMDBr0007593	Hydroxymethylbilane	Water	Not Available	Uroporphyrinogen-Iii Synthase	VMH; KEGG	30371894
MMDBr0007594	Hydrogen Ion	Carbon dioxide	Not Available	Uroporphyrinogen Decarboxylase (Uroporphyrinogen Iii)	VMH; KEGG	30371894
MMDBr0010304	Hydrogen Ion	Uroporphyrinogen III	Not Available	HMR_4768	VMH	30371894
MMDBr0013822	Hydroxymethylbilane	Water	Putative uroporphyrinogen-III synthase	Synthesis	RHEA	34755880
MMDBr0013823	Hydroxymethylbilane	Water	Uroporphyrinogen-III synthase	Synthesis	RHEA	34755880
MMDBr0013838	S-Adenosylmethionine	Hydrogen Ion	Uroporphyrinogen-III C-methyltransferase	Methylation	RHEA	34755880
MMDBr0013839	S-Adenosylmethionine	Hydrogen Ion	Uroporphyrinogen-III C-methyltransferase	Methylation	RHEA	34755880
MMDBr0013929	Hydrogen Ion	Carbon dioxide	Uroporphyrinogen decarboxylase	Decarboxylation	RHEA	34755880
MMDBr0015149	S-Adenosylmethionine	Hydrogen Ion	Siroheme synthase	Methylation; Synthesis	RHEA	34755880
MMDBr0015150	S-Adenosylmethionine	Hydrogen Ion	Uroporphyrinogen-III C-methyltransferase	Methylation	RHEA	34755880
MMDBr0018568	Hydroxymethylbilane	Water	Uroporphyrinogen-III synthase	Synthesis	PathBank	31602464
MMDBr0018569	Hydrogen Ion	Carbon dioxide	Uroporphyrinogen decarboxylase	Carboxylation	PathBank	31602464
MMDBr0018578	Uroporphyrinogen III	Hydrogen Ion	Siroheme synthase	Synthesis	PathBank	31602464
MMDBr0019741	Hydroxymethylbilane	Water	Not Available		PathBank	31602464
MMDBr0019743	Uroporphyrinogen III	Carbon dioxide	Not Available		PathBank	31602464

Health Effects and Bioactivity

Health Outcome/Bioactivity	Metabolite Response/Effect	Evidence Type	Host and Biospecimen	Data Source	Reference

Microbial Sources

Superkingdom/Kingdom	Phylum	Total species	Hosts and Body Sites	Microbial Links
Bacteria	Proteobacteria	496	Human feces; Human sputum; Human ; Human unknown; Pig ; Human pleural fluid plaque; Human dental plaque; Human nasal swab; Human stool; Human feces; pleural fluid plaque; bal; Cattle ; River trout ; Sheep ; Lion ; Chicken ; American dog tick ; Turkey ; Human subgingival plaque	Unknown; Metabolic reconstruction
Bacteria	Firmicutes	293	Pig ; Human feces; Human ; Human urine; Human mucosa; Cattle ; Human stool; Human subgingival plaque; Human saliva; Catfish	Metabolic reconstruction
Bacteria	Actinobacteria	117	Human feces; Human sputum; Human bronchial brush; Human nasopharyngeal swab; Human pleural fluid plaque; Human dental plaque; Human ; Human mucosa; Human supragingival plaque; Human subgingival plaque; Human saliva; Cattle	Metabolic reconstruction
Bacteria	Verrucomicrobia	1	Human ; Human feces	Metabolic reconstruction
Bacteria	Bacteroidetes	59	Human feces; Human ; Human gastric fluid; Human saliva; Human subgingival plaque; Human supragingival plaque	Metabolic reconstruction
Archaea	Thaumarchaeota	1		Metabolic reconstruction
Bacteria	Fusobacteria	20	Human feces; Human	Metabolic reconstruction
Bacteria	Synergistetes	2	Human feces	Metabolic reconstruction
Archaea	Euryarchaeota	5		Metabolic reconstruction
Bacteria	Planctomycetes	1	Human feces	Metabolic reconstruction
Archaea	Crenarchaeota	1		Metabolic reconstruction
Archaea/Archaea	Euryarchaeota	6		Metabolic reconstruction
Bacteria	Chlorobi	11
Eukaryota/Fungi	Ascomycota	3	Human feces; Human saliva	Unknown
Bacteria	Cyanobacteria	32	Human
Archaea	nah	1
Bacteria/NULL	Proteobacteria	2	Human feces; Human sputum; Human ; Human unknown; Pig ; Human pleural fluid plaque; Human dental plaque; Human nasal swab; Human stool; Human feces; pleural fluid plaque; bal; Cattle ; River trout ; Sheep ; Lion ; Chicken ; American dog tick ; Turkey ; Human subgingival plaque	Unknown; Metabolic reconstruction
Bacteria	Aquificae	2
Bacteria	Chloroflexi	5
Bacteria	Chlamydiae	9	Human ; Sheep
Bacteria	Deinococcus-thermus	3
Bacteria	Acidobacteria	2
Bacteria	nah	1
Bacteria	Nitrospirae	1

Exposure Sources

Source Type	Species	Data Source	Reference
Animal	Chondrus crispus	FooDB	31437929
Animal	Laminaria	FooDB	31437929
Animal	Haliotis	FooDB	31437929
Animal	Strombidae	FooDB	31437929
Animal	Clupea harengus harengus	FooDB	31437929
Animal	Undaria pinnatifida	FooDB	31437929
Animal	Peprilus triacanthus	FooDB	31437929
Animal	Rhodophyta	FooDB	31437929
Animal	Myoxocephalus	FooDB	31437929
Animal	Eucheuma	FooDB	31437929
Animal	Saccharina japonica	FooDB	31437929
Animal	Spirulina	FooDB	31437929
Animal	Lota lota	FooDB	31437929
Animal	Porphyra umbilicalis	FooDB	31437929
Plant	Solanum lycopersicum	FooDB	31437929
Plant	Abelmoschus esculentus	FooDB	31437929
Plant	Moringa oleifera	FooDB	31437929
Plant	Pinus edulis	FooDB	31437929
Plant	Passiflora edulis	FooDB	31437929
Plant	Opuntia macrorhiza	FooDB	31437929
Plant	Vigna angularis	FooDB	31437929
Plant	Manilkara zapota	FooDB	31437929
Plant	Cucurbita pepo var. clypeata	FooDB	31437929
Plant	Helianthus annuus	FooDB	31437929
Plant	Mentha spicata	FooDB	31437929
Plant	Corylus	FooDB	31437929
Plant	Malus	FooDB	31437929
Plant	Pisum sativum	FooDB	31437929
Plant	Sambucus nigra	FooDB	31437929
Plant	Allium cepa	FooDB	31437929
Plant	Juglans	FooDB	31437929
Plant	Mangifera indica	FooDB	31437929
Plant	Petroselinum crispum	FooDB	31437929
Plant	Ribes nigrum	FooDB	31437929
Plant	Zingiber officinale	FooDB	31437929
Plant	Chamaemelum nobile	FooDB	31437929
Plant	Illicium verum	FooDB	31437929
Plant		FooDB	31437929
Plant	Laurus nobilis	FooDB	31437929
Plant	Auricularia auricula-judae	FooDB	31437929
Plant	Attalea speciosa	FooDB	31437929
Plant	Juglans ailanthifolia	FooDB	31437929
Plant	Melissa officinalis	FooDB	31437929
Plant	Hippophae rhamnoides	FooDB	31437929
Plant	Polygonum alpinum	FooDB	31437929
Plant	Brassica juncea	FooDB	31437929
Plant	Pediomelum esculentum	FooDB	31437929
Plant	Spinacia oleracea	FooDB	31437929
Plant	Auricularia polytricha	FooDB	31437929
Plant	Camellia oleifera	FooDB	31437929
Plant	Vaccinium corymbosum	FooDB	31437929
Plant	Chrysanthemum coronarium	FooDB	31437929
Plant	Eleocharis dulcis	FooDB	31437929
Plant	Thymus vulgaris	FooDB	31437929
Plant	Actinidia chinensis	FooDB	31437929
Plant	Carica papaya	FooDB	31437929
Plant	Pimenta dioica	FooDB	31437929
Plant	Medicago sativa	FooDB	31437929
Plant	Vigna mungo	FooDB	31437929
Plant	Rubus arcticus	FooDB	31437929
Plant	Agaricus bisporus	FooDB	31437929
Plant	Cajanus cajan	FooDB	31437929
Plant	Rumex articus	FooDB	31437929
Plant	Origanum majorana	FooDB	31437929
Plant	Armoracia rusticana	FooDB	31437929
Plant	Hibiscus sabdariffa	FooDB	31437929
Plant	Benincasa hispida	FooDB	31437929
Plant	Prunus persica	FooDB	31437929
Plant	Canarium ovatum	FooDB	31437929
Plant	Ribes aureum var. villosum	FooDB	31437929
Plant	Cucurbita pepo var. cylindrica	FooDB	31437929
Plant	Brassica oleracea var. gemmifera	FooDB	31437929
Plant	Foeniculum vulgare	FooDB	31437929
Plant	Phoenix dactylifera	FooDB	31437929
Plant	Vaccinium macrocarpon	FooDB	31437929
Plant	Arctium lappa	FooDB	31437929
Plant	Brassica oleracea var. gongylodes	FooDB	31437929
Plant		FooDB	31437929
Plant	Juglans cinerea	FooDB	31437929
Plant	Prunus cerasus	FooDB	31437929
Plant	Eruca vesicaria ssp. sativa	FooDB	31437929
Plant	Rosmarinus officinalis	FooDB	31437929
Plant	Artocarpus altilis	FooDB	31437929
Plant	Citrus x paradisi	FooDB	31437929
Plant	Vigna unguiculata	FooDB	31437929
Plant	Cynara scolymus	FooDB	31437929
Plant	Cyathea	FooDB	31437929
Plant	Metroxylon sagu	FooDB	31437929
Plant	Vitis rotundifolia	FooDB	31437929
Plant	Brosimum alicastrum	FooDB	31437929
Plant	Ficus carica	FooDB	31437929
Plant	Lentinus edodes	FooDB	31437929
Plant	Psidium cattleianum	FooDB	31437929
Plant	Beta vulgaris var. rubra	FooDB	31437929
Plant	Castanea mollissima	FooDB	31437929
Plant	Lepidium sativum	FooDB	31437929
Plant	Morus	FooDB	31437929
Plant	Helianthus tuberosus	FooDB	31437929
Plant	Phytolacca americana	FooDB	31437929
Plant	Grifola frondosa	FooDB	31437929
Plant	Vitis labrusca	FooDB	31437929
Plant	Tetragonia tetragonioides	FooDB	31437929
Plant	Artemisia vulgaris	FooDB	31437929
Plant	Cucumis metuliferus	FooDB	31437929
Plant	Nephelium lappaceum	FooDB	31437929
Plant	Myrica	FooDB	31437929
Plant	Castanea crenata	FooDB	31437929
Plant		FooDB	31437929
Plant	Corylus avellana	FooDB	31437929
Plant	Litchi chinensis	FooDB	31437929
Plant	Juglans regia	FooDB	31437929
Plant	Quercus	FooDB	31437929
Plant	Trigonella foenum-graecum	FooDB	31437929
Plant	Vaccinium angustifolium	FooDB	31437929
Plant	Malpighia emarginata	FooDB	31437929
Plant	Physalis	FooDB	31437929
Plant	Brassica oleracea var. sabauda	FooDB	31437929
Plant	Thelesperma	FooDB	31437929
Plant	Brassica napus	FooDB	31437929
Plant	Asparagus officinalis	FooDB	31437929
Plant	Chamerion angustifolium	FooDB	31437929
Plant	Levisticum officinale	FooDB	31437929
Plant	Pimpinella anisum	FooDB	31437929
Plant	Vaccinium elliottii	FooDB	31437929
Plant	Artemisia dracunculus	FooDB	31437929
Plant	Matricaria recutita	FooDB	31437929
Plant	Citrus aurantiifolia	FooDB	31437929
Plant	Ziziphus zizyphus	FooDB	31437929
Plant	Lactuca sativa	FooDB	31437929
Plant	Dimocarpus longan	FooDB	31437929
Plant	Eragrostis tef	FooDB	31437929
Plant	Salvia hispanica	FooDB	31437929
Plant	Pistacia vera	FooDB	31437929
Plant	Cynara cardunculus	FooDB	31437929
Plant	Vitellaria paradoxa	FooDB	31437929
Plant	Pangium edule	FooDB	31437929
Plant	Malus pumila	FooDB	31437929
Plant	Allium	FooDB	31437929
Plant	Brassica oleracea var. viridis	FooDB	31437929
Plant	Punica granatum	FooDB	31437929
Plant	Agave	FooDB	31437929
Plant	Hedysarum alpinum	FooDB	31437929
Plant	Diospyros	FooDB	31437929
Plant	Vigna aconitifolia	FooDB	31437929
Plant	Amaranthus	FooDB	31437929
Plant	Gossypium	FooDB	31437929
Plant		FooDB	31437929
Plant	Beta vulgaris	FooDB	31437929
Plant	Mammea americana	FooDB	31437929
Plant	Brassica alboglabra	FooDB	31437929
Plant	Annona squamosa	FooDB	31437929
Plant	Apium graveolens var. dulce	FooDB	31437929
Plant	Vitis	FooDB	31437929
Plant	Xanthosoma sagittifolium	FooDB	31437929
Plant	Basella alba	FooDB	31437929
Plant	Cucumis sativus	FooDB	31437929
Plant	Citrus latifolia	FooDB	31437929
Plant	Carya illinoinensis	FooDB	31437929
Plant	Capsicum baccatum var. baccatum	FooDB	31437929
Plant	Byrsonima crassifolia	FooDB	31437929
Plant	Capsicum pubescens	FooDB	31437929
Plant	Cinnamomum aromaticum	FooDB	31437929
Plant	Ribes rubrum	FooDB	31437929
Plant	Crateva religiosa	FooDB	31437929
Plant		FooDB	31437929
Plant	Vitis aestivalis	FooDB	31437929
Plant	Brassica rapa var. chinensis	FooDB	31437929
Plant	Eugenia javanica	FooDB	31437929
Plant	Portulaca oleracea	FooDB	31437929
Plant	Ipomoea batatas	FooDB	31437929
Plant	Mentha arvensis	FooDB	31437929
Plant	Pastinaca sativa	FooDB	31437929
Plant	Cucurbita maxima	FooDB	31437929
Plant	Vaccinium stamineum	FooDB	31437929
Plant	Solanum lycopersicum var. cerasiforme	FooDB	31437929
Plant	Chenopodium album	FooDB	31437929
Plant	Psophocarpus tetragonolobus	FooDB	31437929
Plant	Allium ampeloprasum	FooDB	31437929
Plant	Brassica oleracea	FooDB	31437929
Plant	Sechium edule	FooDB	31437929
Plant	Lactuca sativa l. var. longifolia	FooDB	31437929
Plant	Grataegosorbus mitschurinii	FooDB	31437929
Plant	Diospyros virginiana	FooDB	31437929
Plant	Origanum x majoricum	FooDB	31437929
Plant	Rubus x loganobaccus	FooDB	31437929
Plant	Tragopogon porrifolius	FooDB	31437929
Plant	Taraxacum officinale	FooDB	31437929
Plant	Rumex	FooDB	31437929
Plant	Allium ascalonicum	FooDB	31437929
Plant	Curcuma longa	FooDB	31437929
Plant	Rubus chamaemorus	FooDB	31437929
Plant	Elettaria cardamomum	FooDB	31437929
Plant	Citrullus lanatus var. fistulosus	FooDB	31437929
Plant	Ananas comosus	FooDB	31437929
Plant	Persea americana	FooDB	31437929
Plant	Amelanchier alnifolia	FooDB	31437929
Plant	Eugenia uniflora	FooDB	31437929
Plant	Annona reticulata	FooDB	31437929
Plant	Cichorium intybus	FooDB	31437929
Plant	Sesbania bispinosa	FooDB	31437929
Plant	Chenopodium quinoa	FooDB	31437929
Plant	Brassica oleracea var. botrytis	FooDB	31437929
Plant	Ribes x nidigrolaria	FooDB	31437929
Plant	Garcinia mangostana	FooDB	31437929
Plant	Cucumis melo	FooDB	31437929
Plant	Dioscorea pentaphylla	FooDB	31437929
Plant	Corchorus olitorius	FooDB	31437929
Plant	Juglans nigra	FooDB	31437929
Plant	Lathyrus sativus	FooDB	31437929
Plant	Allium tuberosum	FooDB	31437929
Plant	Cinnamomum verum	FooDB	31437929
Plant	Glycine max	FooDB	31437929
Plant	Gaylussacia baccata	FooDB	31437929
Plant	Petasites japonicus	FooDB	31437929
Plant	Prunus tomentosa	FooDB	31437929
Plant	Ocimum basilicum	FooDB	31437929
Plant	Mentha x piperita	FooDB	31437929
Plant	Maranta arundinacea	FooDB	31437929
Plant	Matteuccia struthiopteris	FooDB	31437929
Plant	Cucurbita moschata	FooDB	31437929
Plant	Macadamia	FooDB	31437929
Plant	Tilia	FooDB	31437929
Plant	Citrus limon	FooDB	31437929
Plant	Vaccinium myrtilloides	FooDB	31437929
Plant	Capsicum annuum var. annuum	FooDB	31437929
Plant	Apium graveolens var. rapaceum	FooDB	31437929
Plant	Papaver	FooDB	31437929
Plant	Rosa	FooDB	31437929
Plant	Nelumbo	FooDB	31437929
Plant	Brassica oleracea var. conica	FooDB	31437929
Plant	Sesamum orientale	FooDB	31437929
Plant	Annona cherimola	FooDB	31437929
Plant	Brassica rapa var. pekinensis	FooDB	31437929
Plant	Brassica rapa	FooDB	31437929
Plant	Lippia graveolens	FooDB	31437929
Plant	Prunus	FooDB	31437929
Plant	Capparis spinosa	FooDB	31437929
Plant	Citrus sinensis	FooDB	31437929
Plant	Lens culinaris	FooDB	31437929
Plant	Vaccinium deliciosum	FooDB	31437929
Plant	Phaseolus lunatus	FooDB	31437929
Plant	Artocarpus heterophyllus	FooDB	31437929
Plant	Prunus virginiana	FooDB	31437929
Plant	Musa acuminata	FooDB	31437929
Plant	Citrullus lanatus	FooDB	31437929
Plant	Linum usitatissimum	FooDB	31437929
Plant	Vigna unguiculata ssp. unguiculata	FooDB	31437929
Plant	Macadamia tetraphylla	FooDB	31437929
Plant	Phyllostachys edulis	FooDB	31437929
Plant	Lagenaria siceraria	FooDB	31437929
Plant	Prunus domestica	FooDB	31437929
Plant	Prunus armeniaca	FooDB	31437929
Plant	Carum carvi	FooDB	31437929
Plant	Allium schoenoprasum	FooDB	31437929
Plant	Carissa macrocarpa	FooDB	31437929
Plant	Citrus reticulata	FooDB	31437929
Plant	Satureja hortensis	FooDB	31437929
Plant	Averrhoa carambola	FooDB	31437929
Plant	Brassica rapa var. rapa	FooDB	31437929
Plant	Sorbus aucuparia	FooDB	31437929
Plant	Anethum graveolens	FooDB	31437929
Plant	Nelumbo nucifera	FooDB	31437929
Plant	Coriandrum sativum	FooDB	31437929
Plant	Bertholletia excelsa	FooDB	31437929
Plant	Brassica oleracea var. costata	FooDB	31437929
Plant	Panax	FooDB	31437929
Plant	Ceratonia siliqua	FooDB	31437929
Plant	Cymbopogon citratus	FooDB	31437929
Plant	Luffa aegyptiaca	FooDB	31437929
Plant	Anacardium occidentale	FooDB	31437929
Plant	Carthamus tinctorius	FooDB	31437929
Plant	Rubus occidentalis	FooDB	31437929
Plant	Vigna umbellata	FooDB	31437929
Plant	Cicer arietinum	FooDB	31437929
Plant	Allium fistulosum	FooDB	31437929
Plant	Capsicum	FooDB	31437929
Plant	Vaccinium alaskaense	FooDB	31437929
Plant	Lupinus	FooDB	31437929
Plant	Tilia cordata	FooDB	31437929
Plant	Prunus persica var. nucipersica	FooDB	31437929
Plant	Camellia sinensis	FooDB	31437929
Plant	Durio zibethinus	FooDB	31437929
Plant	Eriobotrya japonica	FooDB	31437929
Plant	Solanum lycopersicum var. lycopersicum	FooDB	31437929
Plant	Brassica napus var. pabularia	FooDB	31437929
Plant	Oenothera biennis	FooDB	31437929
Plant	Diospyros kaki	FooDB	31437929
Plant	Ribes glandulosum	FooDB	31437929
Plant	Virola surinamensis	FooDB	31437929
Plant	Verbena officinalis	FooDB	31437929
Plant	Phaseolus vulgaris	FooDB	31437929
Plant	Theobroma cacao	FooDB	31437929
Plant	Daucus carota ssp. sativus	FooDB	31437929
Plant	Vaccinium oxycoccos	FooDB	31437929
Plant	Rumex acetosa	FooDB	31437929
Plant	Syzygium aromaticum	FooDB	31437929
Plant	Pyrus pyrifolia	FooDB	31437929
Plant	Vaccinium myrtillus	FooDB	31437929
Plant	Vaccinium parvifolium	FooDB	31437929
Plant	Aloysia triphylla	FooDB	31437929
Plant	Brassica oleracea var. capitata	FooDB	31437929
Plant	Capsicum chinense	FooDB	31437929
Plant	Vicia faba	FooDB	31437929
Plant	Vaccinium reticulatum	FooDB	31437929
Plant	Solanum quitoense	FooDB	31437929
Plant	Ginkgo biloba	FooDB	31437929
Plant	Theobroma grandiflorum	FooDB	31437929
Plant	Vigna unguiculata ssp. cylindrica	FooDB	31437929
Plant	Flammulina velutipes	FooDB	31437929
Plant	Satureja montana	FooDB	31437929
Plant		FooDB	31437929
Plant	Vitis vinifera	FooDB	31437929
Plant	Citrus japonica	FooDB	31437929
Plant	Prunus avium	FooDB	31437929
Plant	Perideridia oregana	FooDB	31437929
Plant	Vaccinium arboreum	FooDB	31437929
Plant	Pouteria sapota	FooDB	31437929
Plant	Wasabia japonica	FooDB	31437929
Plant	Piper nigrum	FooDB	31437929
Plant	Origanum onites	FooDB	31437929
Plant	Capsicum annuum	FooDB	31437929
Plant	Origanum vulgare	FooDB	31437929
Plant	Viburnum edule	FooDB	31437929
Plant	Dioscorea	FooDB	31437929
Plant	Brassica oleracea var. italica	FooDB	31437929
Plant	Momordica charantia	FooDB	31437929
Plant	Vaccinium uliginosum	FooDB	31437929
Plant	Castanea	FooDB	31437929
Plant	Rubus ursinus x idaeus	FooDB	31437929
Plant	Pleurotus ostreatus	FooDB	31437929
Plant	Cirsium	FooDB	31437929
Plant	Solanum melongena	FooDB	31437929
Plant	Opuntia	FooDB	31437929
Plant	Raphanus sativus var. sativus	FooDB	31437929
Plant	Colocasia esculenta	FooDB	31437929
Plant	Prunus persica var. persica	FooDB	31437929
Plant	Anthriscus cerefolium	FooDB	31437929
Plant	Nuphar lutea	FooDB	31437929
Plant	Myristica fragrans	FooDB	31437929
Plant	Pachyrhizus erosus	FooDB	31437929
Plant	Lupinus albus	FooDB	31437929
Plant	Cichorium endivia	FooDB	31437929
Plant	Apium graveolens	FooDB	31437929
Plant	Elaeis	FooDB	31437929
Plant	Cinnamomum	FooDB	31437929
Plant	Ribes uva-crispa	FooDB	31437929
Plant	Feijoa sellowiana	FooDB	31437929
Plant	Dysphania ambrosioides	FooDB	31437929
Plant	Raphanus sativus var. niger	FooDB	31437929
Plant	Photinia melanocarpa	FooDB	31437929
Plant	Salvia officinalis	FooDB	31437929
Plant	Rheum rhabarbarum	FooDB	31437929
Plant	Vaccinium	FooDB	31437929
Plant	Lablab purpureus	FooDB	31437929
Plant	Crocus sativus	FooDB	31437929
Plant	Citrus maxima	FooDB	31437929
Plant	Syzygium jambos	FooDB	31437929
Plant	Salix pulchra	FooDB	31437929
Plant	Castanea sativa	FooDB	31437929
Plant	Cydonia oblonga	FooDB	31437929
Plant	Annona muricata	FooDB	31437929
Plant	Fagus	FooDB	31437929
Plant	Cucurbita	FooDB	31437929
Plant	Opuntia cochenillifera	FooDB	31437929
Plant	Vaccinium ovatum	FooDB	31437929
Plant	Cocos nucifera	FooDB	31437929
Plant	Phaseolus coccineus	FooDB	31437929
Plant	Thymus pulegioides	FooDB	31437929
Plant	Tamarindus indica	FooDB	31437929
Plant	Mespilus germanica	FooDB	31437929
Plant	Brassica rapa var. perviridis	FooDB	31437929
Plant	Cucurbita pepo var. cylindrica	FooDB	31437929
Plant	Mentha aquatica	FooDB	31437929
Plant	Salvia elegans	FooDB	31437929
Plant	Mentha	FooDB	31437929
Plant	Sagittaria latifolia	FooDB	31437929
Plant	Solanum tuberosum	FooDB	31437929
Plant	Olea europaea	FooDB	31437929
Plant	Sambucus	FooDB	31437929
Plant	Pinus	FooDB	31437929
Plant	Psidium guajava	FooDB	31437929
Plant	Syzygium cumini	FooDB	31437929
Plant	Tilia tomentosa	FooDB	31437929
Plant	Typha angustifolia	FooDB	31437929
Plant	Daucus carota	FooDB	31437929
Plant	Empetrum nigrum	FooDB	31437929
Plant	Valerianella locusta	FooDB	31437929
Plant	Myrica rubra	FooDB	31437929
Plant	Vaccinium vitis-idaea	FooDB	31437929
Plant	Vaccinium angustifolium x vaccinium corymbosum	FooDB	31437929
Plant	Sisymbrium	FooDB	31437929
Plant	Vanilla	FooDB	31437929
Plant	Carya	FooDB	31437929
Plant	Brassica oleracea l. var. capitata l. f. alba dc.	FooDB	31437929
Plant	Physalis philadelphica var. immaculata	FooDB	31437929
Plant	Vigna radiata	FooDB	31437929
Plant	Borago officinalis	FooDB	31437929
Plant	Raphanus sativus	FooDB	31437929
Plant	Prunus dulcis	FooDB	31437929
Plant	Hyssopus officinalis	FooDB	31437929
Plant	Manihot esculenta	FooDB	31437929
Plant	Beta vulgaris ssp. cicla	FooDB	31437929
Plant	Scorzonera hispanica	FooDB	31437929
Plant	Vigna unguiculata ssp. sesquipedalis	FooDB	31437929
Plant	Angelica keiskei	FooDB	31437929
Plant	Ipomoea aquatica	FooDB	31437929
Plant	Musa x paradisiaca	FooDB	31437929
Plant	Cuminum cyminum	FooDB	31437929
Plant	Rubus spectabilis	FooDB	31437929
Plant	Allium sativum	FooDB	31437929
Plant	Arachis hypogaea	FooDB	31437929
Plant	Rubus idaeus	FooDB	31437929
Plant	Cantharellus cibarius	FooDB	31437929
Plant	Sinapis alba	FooDB	31437929
Plant	Fragaria x ananassa	FooDB	31437929
Plant	Pyrus communis	FooDB	31437929
Plant	Brassica ruvo	FooDB	31437929
Plant	Apium graveolens var. secalinum	FooDB	31437929
Plant	Morus nigra	FooDB	31437929

Host Biospecimen and Location

Host and Biospecimen	Status	Mean	Std	Min	Max	Units	Age	Sex	Health Condition	Data Source	Reference
Human Feces	Detected but not Quantified									HMDB

External Links

HMDB ID

HMDB0001086

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FooDB ID

KNApSAcK ID

Chemspider ID

KEGG Compound ID

BioCyc ID

BiGG ID

Wikipedia Link

METLIN ID

PubChem Compound

1179

PDB ID

Not Available

ChEBI ID

15437

Food Biomarker Ontology

Not Available

References

Synthesis Reference

Not Available

General References

Aizencang G, Solis C, Bishop DF, Warner C, Desnick RJ: Human uroporphyrinogen-III synthase: genomic organization, alternative promoters, and erythroid-specific expression. Genomics. 2000 Dec 1;70(2):223-31. doi: 10.1006/geno.2000.6373. [PubMed:11112350 ]
Martins BM, Grimm B, Mock HP, Huber R, Messerschmidt A: Crystal structure and substrate binding modeling of the uroporphyrinogen-III decarboxylase from Nicotiana tabacum. Implications for the catalytic mechanism. J Biol Chem. 2001 Nov 23;276(47):44108-16. doi: 10.1074/jbc.M104759200. Epub 2001 Aug 27. [PubMed:11524417 ]

Showing metabocard for Uroporphyrinogen III (MMDBc0029550)

MOL for #<Metabolite:0x00007fa4b9fe6f90>

3D MOL for #<Metabolite:0x00007fa4b9fe6f90>

3D SDF for #<Metabolite:0x00007fa4b9fe6f90>

3D-SDF for #<Metabolite:0x00007fa4b9fe6f90>

PDB for #<Metabolite:0x00007fa4b9fe6f90>

3D PDB for #<Metabolite:0x00007fa4b9fe6f90>

SMILES for #<Metabolite:0x00007fa4b9fe6f90>

INCHI for #<Metabolite:0x00007fa4b9fe6f90>

Structure for #<Metabolite:0x00007fa4b9fe6f90>

3D Structure for #<Metabolite:0x00007fa4b9fe6f90>