| MMDBm0000585 | Candida tropicalis | Fungi | Ascomycota | Human Feces | Not Available | RHEA |
| MMDBm0008619 | Zymoseptoria tritici IPO323 | Fungi | Ascomycota | Not Available | Not Available | RHEA |
| MMDBm0000583 | Saccharomyces cerevisiae | Fungi | Ascomycota | Human Feces | Unknown | YMDB |
| MMDBm0098684 | Saccharomyces pastorianus CBS 1503 | Fungi | Ascomycota | Not Available | Not Available | RHEA |
| MMDBm0101577 | Schizosaccharomyces pombe 972h- | Fungi | Ascomycota | Not Available | Not Available | RHEA |
| MMDBm0029026 | Aspergillus fumigatus Af293 | Fungi | Ascomycota | Not Available | Not Available | RHEA |
| MMDBm0096592 | Yarrowia lipolytica CLIB122 | Fungi | Ascomycota | Not Available | Not Available | RHEA |
| MMDBm0098378 | Saccharomyces cerevisiae S288C | Fungi | Ascomycota | Not Available | Not Available | RHEA |
| MMDBm0095324 | Candida albicans SC5314 | Fungi | Ascomycota | Not Available | Not Available | RHEA |
| MMDBm0064895 | Fusarium sp. | Fungi | Ascomycota | Not Available | Not Available | RHEA |
| MMDBm0138596 | Ganoderma lucidum | Fungi | Basidiomycota | Not Available | Not Available | RHEA |
| MMDBm0156399 | Ustilago maydis 521 | Fungi | Basidiomycota | Not Available | Not Available | RHEA |
| MMDBm0079093 | Pyricularia oryzae 70-15 | Fungi | Ascomycota | Not Available | Not Available | RHEA |
| MMDBm0064156 | Fusarium graminearum PH-1 | Fungi | Ascomycota | Not Available | Not Available | RHEA |
| MMDBm0029023 | Aspergillus fumigatus A1163 | Fungi | Ascomycota | Not Available | Not Available | RHEA |
| MMDBm0001673 | Haloferax volcanii DS2 | Archaea | Euryarchaeota | Not Available | Not Available | RHEA |
| MMDBm0766911 | Brevibacillus agri BAB-2500 | Bacteria | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0000068 | Bifidobacterium bifidum S17 | Bacteria | Actinobacteria | Human | Metabolic reconstruction | VMH |
| MMDBm0000153 | Enterococcus faecalis | Bacteria | Firmicutes | Human | Metabolic reconstruction | VMH |
| MMDBm0501236 | Sutterella parvirubra YIT 11816 | Bacteria | Proteobacteria | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0802657 | Dorea longicatena DSM 13814 | Bacteria | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0798946 | Clostridium sporogenes ATCC 15579 | Bacteria | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0416185 | Fusobacterium gonidiaformans 3-1-5R | Bacteria | Fusobacteria | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0645922 | Actinomyces urogenitalis DSM 15434 | Bacteria | Actinobacteria | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0001794 | Lysinibacillus sphaericus C3-41 | Bacteria | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
