| MMDBm0156399 | Ustilago maydis 521 | Fungi | Basidiomycota | Not Available | Not Available | RHEA |
| MMDBm0148853 | Cryptococcus neoformans var. neoformans B-3501A | Fungi | Basidiomycota | Not Available | Not Available | RHEA |
| MMDBm0148857 | Cryptococcus neoformans var. neoformans JEC21 | Fungi | Basidiomycota | Not Available | Not Available | RHEA |
| MMDBm0002642 | Sulfolobus tokodaii str. 7 | Archaea | Crenarchaeota | Not Available | Not Available | RHEA |
| MMDBm0064354 | Fusarium vanettenii 77-13-4 | Fungi | Ascomycota | Not Available | Not Available | RHEA |
| MMDBm0082238 | Sordaria macrospora k-hell | Fungi | Ascomycota | Not Available | Not Available | RHEA |
| MMDBm0056931 | Verticillium alfalfae VaMs.102 | Fungi | Ascomycota | Not Available | Not Available | RHEA |
| MMDBm0079093 | Pyricularia oryzae 70-15 | Fungi | Ascomycota | Not Available | Not Available | RHEA |
| MMDBm0081377 | Podospora anserina S mat+ | Fungi | Ascomycota | Not Available | Not Available | RHEA |
| MMDBm0082117 | Neurospora crassa OR74A | Fungi | Ascomycota | Not Available | Not Available | RHEA |
| MMDBm0080658 | Chaetomium globosum | Fungi | Ascomycota | Human Feces | Not Available | RHEA |
| MMDBm0881918 | Candidatus Nitrososphaera gargensis Ga9.2 | Archaea | Thaumarchaeota | Not Available | Metabolic reconstruction | VMH |
| MMDBm0050478 | Botrytis cinerea B05.10 | Fungi | Ascomycota | Not Available | Not Available | RHEA |
| MMDBm0050750 | Sclerotinia sclerotiorum 1980 UF-70 | Fungi | Ascomycota | Not Available | Not Available | RHEA |
| MMDBm0560533 | Serratia marcescens | Bacteria | Proteobacteria | Human | Metabolic reconstruction | VMH |
| MMDBm0002164 | Acinetobacter calcoaceticus PHEA-2 | Bacteria | Proteobacteria | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0002675 | Teredinibacter turnerae T7901 | Bacteria | Proteobacteria | Not Available | Not Available | RHEA |
| MMDBm0580585 | Pseudomonas monteilii NBRC 103158 = DSM 14164 | Bacteria | Proteobacteria | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0557502 | Hafnia alvei ATCC 51873 | Bacteria | Proteobacteria | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0002506 | Serratia proteamaculans 568 | Bacteria | Proteobacteria | Human | Not Available | RHEA |
| MMDBm0560557 | Serratia marcescens subsp. marcescens Db11 | Bacteria | Proteobacteria | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0558544 | Providencia rettgeri DSM 1131 | Bacteria | Proteobacteria | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0001593 | Escherichia coli SE11 | Bacteria | Proteobacteria | Human | Metabolic reconstruction | VMH |
| MMDBm0002398 | Pseudomonas entomophila L48 | Bacteria | Proteobacteria | Not Available | Not Available | RHEA |
| MMDBm0001589 | Escherichia coli HS | Bacteria | Proteobacteria | Human | Not Available | RHEA |
