MiMeDB: Showing metabocard for Uroporphyrinogen I (MMDBc0029688)

Record Information

Version

1.0

Status

Detected and Quantified

Creation Date

2021-11-17 23:37:37 UTC

Update Date

2024-04-30 19:40:42 UTC

Metabolite ID

MMDBc0029688

Metabolite Identification

Common Name

Uroporphyrinogen I

Description

Uroporphyrinogens are porphyrinogen variants in which each pyrrole ring has one acetate side chain and one propionate side chain; it is formed by condensation 4 four molecules of porphobilinogen. 4 isomers are possible but only 2 commoly are found, types and I. Uroporphyrinogen I is a functional intermediate in heme biosynthesis while Uroporphyrinogen is produced in an abortive side reaction.

Structure

MOL 3D MOL SDF 3D SDF PDB 3D PDB SMILES InChI


  Mrv0541 02231219262D          

 60 64  0  0  0  0            999 V2000
   29.3550   -4.7999    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   29.9995  -11.4693    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   22.7651   -5.4043    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   23.2438  -11.7544    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   30.9574   -7.3317    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   25.2888   -3.9167    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   27.4367  -12.9617    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   21.7262   -9.2786    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   28.1865   -3.9774    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   30.8598  -10.3283    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   21.8999   -6.5414    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   24.3035  -12.7128    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   22.4407   -8.0411    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   26.1278  -12.3885    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   26.5978   -4.4899    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   30.4054   -8.6497    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   26.3490   -7.3231    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   27.6155   -8.4530    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   25.1362   -8.4530    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   26.3766   -9.5828    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   24.6037  -11.3157    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   23.3174   -6.7221    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   29.4416  -10.1539    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   28.0585   -5.4006    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   27.2368   -5.3267    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   29.5423   -9.3350    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   23.2131   -7.5405    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   25.4103  -11.4890    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   23.1552   -9.2785    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   27.2786  -11.5415    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   25.4470   -5.3369    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   29.5400   -7.5127    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   24.9166   -9.8577    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   24.8891   -7.0207    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   27.8642   -9.8577    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   27.8365   -7.0207    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   24.0504  -11.9276    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   22.6608   -6.2226    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   30.1003  -10.6505    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   28.5333   -4.7260    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   30.3010   -7.8314    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   25.7779   -4.5812    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   26.9477  -12.2972    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   22.4408   -8.8661    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   27.0382   -6.7720    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   28.1114   -9.0594    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   24.6680   -7.8190    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   25.7150  -10.1064    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   28.0838   -7.7914    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   25.6874   -6.7997    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   27.0382  -10.0787    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   24.6680   -9.0870    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   26.7620   -6.0013    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   28.8835   -8.8383    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   23.8697   -8.0401    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   25.9636  -10.8771    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   23.8697   -8.8660    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   26.7896  -10.8771    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   25.9360   -6.0013    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   28.8835   -8.0124    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1 40  1  0  0  0  0
  2 39  1  0  0  0  0
  3 38  1  0  0  0  0
  4 37  1  0  0  0  0
  5 41  1  0  0  0  0
  6 42  1  0  0  0  0
  7 43  1  0  0  0  0
  8 44  1  0  0  0  0
  9 40  2  0  0  0  0
 10 39  2  0  0  0  0
 11 38  2  0  0  0  0
 12 37  2  0  0  0  0
 13 44  2  0  0  0  0
 14 43  2  0  0  0  0
 15 42  2  0  0  0  0
 16 41  2  0  0  0  0
 17 45  1  0  0  0  0
 17 50  1  0  0  0  0
 18 46  1  0  0  0  0
 18 49  1  0  0  0  0
 19 47  1  0  0  0  0
 19 52  1  0  0  0  0
 20 48  1  0  0  0  0
 20 51  1  0  0  0  0
 21 28  1  0  0  0  0
 21 37  1  0  0  0  0
 22 27  1  0  0  0  0
 22 38  1  0  0  0  0
 23 26  1  0  0  0  0
 23 39  1  0  0  0  0
 24 25  1  0  0  0  0
 24 40  1  0  0  0  0
 25 53  1  0  0  0  0
 26 54  1  0  0  0  0
 27 55  1  0  0  0  0
 28 56  1  0  0  0  0
 29 44  1  0  0  0  0
 29 57  1  0  0  0  0
 30 43  1  0  0  0  0
 30 58  1  0  0  0  0
 31 42  1  0  0  0  0
 31 59  1  0  0  0  0
 32 41  1  0  0  0  0
 32 60  1  0  0  0  0
 33 48  1  0  0  0  0
 33 52  1  0  0  0  0
 34 47  1  0  0  0  0
 34 50  1  0  0  0  0
 35 46  1  0  0  0  0
 35 51  1  0  0  0  0
 36 45  1  0  0  0  0
 36 49  1  0  0  0  0
 45 53  2  0  0  0  0
 46 54  2  0  0  0  0
 47 55  2  0  0  0  0
 48 56  2  0  0  0  0
 49 60  2  0  0  0  0
 50 59  2  0  0  0  0
 51 58  2  0  0  0  0
 52 57  2  0  0  0  0
 53 59  1  0  0  0  0
 54 60  1  0  0  0  0
 55 57  1  0  0  0  0
 56 58  1  0  0  0  0
M  END

HMDB0002211
     RDKit          3D
Uroporphyrinogen I
104108  0  0  0  0  0  0  0  0999 V2000
    7.0854    1.2739    1.9971 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.2840    0.8761    0.8229 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.5059    1.0883    0.2477 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.1581    0.1744    0.0892 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.9460    0.0804    0.9909 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7875   -0.6077    0.3068 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9260   -0.1076   -0.6618 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0321   -1.0678   -0.9957 N   0  0  0  0  0  0  0  0  0  0  0  0
    2.2951   -2.1512   -0.2629 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4025   -1.9058    0.5758 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.0588   -2.8225    1.5552 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.2636   -3.4759    1.0741 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.7189   -3.3346   -0.0867 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.0127   -4.3309    1.9045 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.5263   -3.4677   -0.2019 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0312   -3.2865   -0.0211 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6360   -2.4743    0.8094 N   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9520   -2.5975    0.4971 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1318   -3.5017   -0.5365 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4058   -3.9477   -1.2189 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8866   -2.9615   -2.1866 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2244   -1.8992   -2.3384 O   0  0  0  0  0  0  0  0  0  0  0  0
   -5.0486   -3.2421   -2.8899 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8695   -3.9490   -0.8737 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6278   -4.9790   -1.9222 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5435   -6.3273   -1.2617 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5150   -6.4718   -0.2613 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7069   -6.7689   -0.5478 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.2184   -6.2751    1.0879 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1068   -1.8147    1.1019 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1155   -0.3421    0.7002 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0876    0.5281    0.7882 N   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4815    1.6758    0.2358 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8154    1.5504   -0.2191 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6525    2.6092   -0.8962 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2584    2.7811   -2.3043 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3542    2.1301   -2.8515 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.9484    3.7287   -3.0424 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2022    0.2785    0.0805 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.5851   -0.2617   -0.1702 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.4732   -0.1608    1.0361 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.0010   -0.8595    2.2192 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.2264   -0.2812    3.0202 O   0  0  0  0  0  0  0  0  0  0  0  0
   -6.3974   -2.1616    2.4740 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7074    2.9590    0.0069 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2218    2.8220   -0.1928 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4663    1.8753   -0.8488 N   0  0  0  0  0  0  0  0  0  0  0  0
    1.7735    2.1511   -0.6694 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9183    3.3014    0.1069 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1812    4.0099    0.5266 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7575    4.8030   -0.5466 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2224    4.8563   -1.6703 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.9149    5.5207   -0.3533 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.6594    3.7446    0.4220 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3039    4.9553    1.2334 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1561    6.0867    0.3817 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4968    7.2604    1.2295 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3658    7.1848    2.4714 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9618    8.4516    0.6888 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.9579    1.3219   -1.1377 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.3270    0.9385    0.8520 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.5971   -0.7976   -0.1828 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.9864    0.8273   -0.7915 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.6858    1.0715    1.3430 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.2934   -0.5959    1.8192 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2425   -0.9578   -1.7840 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.3200   -3.6034    1.8063 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.3608   -2.2498    2.4726 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.0435   -5.3230    1.6736 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.7682   -4.0812   -1.1233 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.9297   -4.1504    0.5780 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2092   -1.8511    1.6153 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2373   -4.9379   -1.6816 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1204   -4.1263   -0.3778 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.5916   -2.4616   -3.2854 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.3563   -4.7998   -2.4017 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4562   -5.0236   -2.6480 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4035   -7.1455   -2.0089 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5078   -6.5981   -0.7512 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.9373   -6.0943    1.7769 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0666   -2.2683    0.6820 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2787   -2.0097    2.1620 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1103    0.3311    1.2906 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4769    3.5419   -0.3325 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.7219    2.3442   -0.7833 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3892    4.3423   -3.6470 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.0665    0.3350   -0.9793 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.4561   -1.3079   -0.4894 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.6715    0.9179    1.3062 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.4843   -0.5291    0.6901 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.4100   -2.4667    3.4437 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9513    3.6254    0.8638 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1492    3.5623   -0.8449 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.0419    1.0520   -1.4662 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.9434    4.5529    1.4571 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.8925    3.1996    0.8627 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.3127    6.1581   -1.0293 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5159    4.6133    1.9209 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.1383    5.2159    1.8939 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.6974    6.4112   -0.2601 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9773    5.8278   -0.3036 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3987    8.9608    0.0175 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.8692    1.8142   -0.6802 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.2185    1.4920   -2.1883 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  0
  2  3  1  0
  2  4  1  0
  4  5  1  0
  5  6  1  0
  6  7  2  0
  7  8  1  0
  8  9  1  0
  9 10  2  0
 10 11  1  0
 11 12  1  0
 12 13  2  0
 12 14  1  0
  9 15  1  0
 15 16  1  0
 16 17  1  0
 17 18  1  0
 18 19  2  0
 19 20  1  0
 20 21  1  0
 21 22  2  0
 21 23  1  0
 19 24  1  0
 24 25  1  0
 25 26  1  0
 26 27  1  0
 27 28  2  0
 27 29  1  0
 18 30  1  0
 30 31  1  0
 31 32  1  0
 32 33  1  0
 33 34  2  0
 34 35  1  0
 35 36  1  0
 36 37  2  0
 36 38  1  0
 34 39  1  0
 39 40  1  0
 40 41  1  0
 41 42  1  0
 42 43  2  0
 42 44  1  0
 33 45  1  0
 45 46  1  0
 46 47  1  0
 47 48  1  0
 48 49  2  0
 49 50  1  0
 50 51  1  0
 51 52  2  0
 51 53  1  0
 49 54  1  0
 54 55  1  0
 55 56  1  0
 56 57  1  0
 57 58  2  0
 57 59  1  0
 48 60  1  0
 10  6  1  0
 24 16  2  0
 39 31  2  0
 54 46  2  0
 60  7  1  0
  3 61  1  0
  4 62  1  0
  4 63  1  0
  5 64  1  0
  5 65  1  0
  8 66  1  0
 11 67  1  0
 11 68  1  0
 14 69  1  0
 15 70  1  0
 15 71  1  0
 17 72  1  0
 20 73  1  0
 20 74  1  0
 23 75  1  0
 25 76  1  0
 25 77  1  0
 26 78  1  0
 26 79  1  0
 29 80  1  0
 30 81  1  0
 30 82  1  0
 32 83  1  0
 35 84  1  0
 35 85  1  0
 38 86  1  0
 40 87  1  0
 40 88  1  0
 41 89  1  0
 41 90  1  0
 44 91  1  0
 45 92  1  0
 45 93  1  0
 47 94  1  0
 50 95  1  0
 50 96  1  0
 53 97  1  0
 55 98  1  0
 55 99  1  0
 56100  1  0
 56101  1  0
 59102  1  0
 60103  1  0
 60104  1  0
M  END


  Mrv0541 02231219262D          

 60 64  0  0  0  0            999 V2000
   29.3550   -4.7999    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   29.9995  -11.4693    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   22.7651   -5.4043    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   23.2438  -11.7544    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   30.9574   -7.3317    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   25.2888   -3.9167    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   27.4367  -12.9617    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   21.7262   -9.2786    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   28.1865   -3.9774    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   30.8598  -10.3283    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   21.8999   -6.5414    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   24.3035  -12.7128    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   22.4407   -8.0411    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   26.1278  -12.3885    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   26.5978   -4.4899    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   30.4054   -8.6497    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   26.3490   -7.3231    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   27.6155   -8.4530    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   25.1362   -8.4530    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   26.3766   -9.5828    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   24.6037  -11.3157    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   23.3174   -6.7221    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   29.4416  -10.1539    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   28.0585   -5.4006    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   27.2368   -5.3267    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   29.5423   -9.3350    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   23.2131   -7.5405    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   25.4103  -11.4890    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   23.1552   -9.2785    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   27.2786  -11.5415    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   25.4470   -5.3369    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   29.5400   -7.5127    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   24.9166   -9.8577    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   24.8891   -7.0207    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   27.8642   -9.8577    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   27.8365   -7.0207    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   24.0504  -11.9276    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   22.6608   -6.2226    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   30.1003  -10.6505    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   28.5333   -4.7260    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   30.3010   -7.8314    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   25.7779   -4.5812    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   26.9477  -12.2972    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   22.4408   -8.8661    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   27.0382   -6.7720    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   28.1114   -9.0594    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   24.6680   -7.8190    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   25.7150  -10.1064    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   28.0838   -7.7914    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   25.6874   -6.7997    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   27.0382  -10.0787    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   24.6680   -9.0870    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   26.7620   -6.0013    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   28.8835   -8.8383    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   23.8697   -8.0401    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   25.9636  -10.8771    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   23.8697   -8.8660    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   26.7896  -10.8771    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   25.9360   -6.0013    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   28.8835   -8.0124    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1 40  1  0  0  0  0
  2 39  1  0  0  0  0
  3 38  1  0  0  0  0
  4 37  1  0  0  0  0
  5 41  1  0  0  0  0
  6 42  1  0  0  0  0
  7 43  1  0  0  0  0
  8 44  1  0  0  0  0
  9 40  2  0  0  0  0
 10 39  2  0  0  0  0
 11 38  2  0  0  0  0
 12 37  2  0  0  0  0
 13 44  2  0  0  0  0
 14 43  2  0  0  0  0
 15 42  2  0  0  0  0
 16 41  2  0  0  0  0
 17 45  1  0  0  0  0
 17 50  1  0  0  0  0
 18 46  1  0  0  0  0
 18 49  1  0  0  0  0
 19 47  1  0  0  0  0
 19 52  1  0  0  0  0
 20 48  1  0  0  0  0
 20 51  1  0  0  0  0
 21 28  1  0  0  0  0
 21 37  1  0  0  0  0
 22 27  1  0  0  0  0
 22 38  1  0  0  0  0
 23 26  1  0  0  0  0
 23 39  1  0  0  0  0
 24 25  1  0  0  0  0
 24 40  1  0  0  0  0
 25 53  1  0  0  0  0
 26 54  1  0  0  0  0
 27 55  1  0  0  0  0
 28 56  1  0  0  0  0
 29 44  1  0  0  0  0
 29 57  1  0  0  0  0
 30 43  1  0  0  0  0
 30 58  1  0  0  0  0
 31 42  1  0  0  0  0
 31 59  1  0  0  0  0
 32 41  1  0  0  0  0
 32 60  1  0  0  0  0
 33 48  1  0  0  0  0
 33 52  1  0  0  0  0
 34 47  1  0  0  0  0
 34 50  1  0  0  0  0
 35 46  1  0  0  0  0
 35 51  1  0  0  0  0
 36 45  1  0  0  0  0
 36 49  1  0  0  0  0
 45 53  2  0  0  0  0
 46 54  2  0  0  0  0
 47 55  2  0  0  0  0
 48 56  2  0  0  0  0
 49 60  2  0  0  0  0
 50 59  2  0  0  0  0
 51 58  2  0  0  0  0
 52 57  2  0  0  0  0
 53 59  1  0  0  0  0
 54 60  1  0  0  0  0
 55 57  1  0  0  0  0
 56 58  1  0  0  0  0
M  END
> <DATABASE_ID>
MMDBc0029688

> <DATABASE_NAME>
MIME

> <SMILES>
OC(=O)CCC1=C2CC3=C(CC(O)=O)C(CCC(O)=O)=C(CC4=C(CC(O)=O)C(CCC(O)=O)=C(CC5=C(CC(O)=O)C(CCC(O)=O)=C(CC(N2)=C1CC(O)=O)N5)N4)N3

> <INCHI_IDENTIFIER>
InChI=1S/C40H44N4O16/c45-33(46)5-1-17-21(9-37(53)54)29-14-26-19(3-7-35(49)50)23(11-39(57)58)31(43-26)16-28-20(4-8-36(51)52)24(12-40(59)60)32(44-28)15-27-18(2-6-34(47)48)22(10-38(55)56)30(42-27)13-25(17)41-29/h41-44H,1-16H2,(H,45,46)(H,47,48)(H,49,50)(H,51,52)(H,53,54)(H,55,56)(H,57,58)(H,59,60)

> <INCHI_KEY>
QTTNOSKSLATGQB-UHFFFAOYSA-N

> <FORMULA>
C40H44N4O16

> <MOLECULAR_WEIGHT>
836.7946

> <EXACT_MASS>
836.27523138

> <JCHEM_ACCEPTOR_COUNT>
16

> <JCHEM_AVERAGE_POLARIZABILITY>
84.04885896753298

> <JCHEM_BIOAVAILABILITY>
0

> <JCHEM_DONOR_COUNT>
12

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
3-[9,14,19-tris(2-carboxyethyl)-5,10,15,20-tetrakis(carboxymethyl)-21,22,23,24-tetraazapentacyclo[16.2.1.1³,⁶.1⁸,¹¹.1¹³,¹⁶]tetracosa-1(20),3,5,8,10,13,15,18-octaen-4-yl]propanoic acid

> <ALOGPS_LOGP>
0.67

> <JCHEM_LOGP>
1.3885468186666658

> <ALOGPS_LOGS>
-4.28

> <JCHEM_MDDR_LIKE_RULE>
1

> <JCHEM_NUMBER_OF_RINGS>
5

> <JCHEM_PHYSIOLOGICAL_CHARGE>
-8

> <JCHEM_PKA>
3.637787417773223

> <JCHEM_PKA_STRONGEST_ACIDIC>
3.2696010339864108

> <JCHEM_POLAR_SURFACE_AREA>
361.56000000000006

> <JCHEM_REFRACTIVITY>
206.92640000000011

> <JCHEM_ROTATABLE_BOND_COUNT>
20

> <JCHEM_RULE_OF_FIVE>
0

> <ALOGPS_SOLUBILITY>
4.37e-02 g/l

> <JCHEM_TRADITIONAL_IUPAC>
uroporphyrinogen I

> <JCHEM_VEBER_RULE>
0

$$$$

HMDB0002211
     RDKit          3D
Uroporphyrinogen I
104108  0  0  0  0  0  0  0  0999 V2000
    7.0854    1.2739    1.9971 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.2840    0.8761    0.8229 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.5059    1.0883    0.2477 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.1581    0.1744    0.0892 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.9460    0.0804    0.9909 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7875   -0.6077    0.3068 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9260   -0.1076   -0.6618 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0321   -1.0678   -0.9957 N   0  0  0  0  0  0  0  0  0  0  0  0
    2.2951   -2.1512   -0.2629 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4025   -1.9058    0.5758 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.0588   -2.8225    1.5552 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.2636   -3.4759    1.0741 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.7189   -3.3346   -0.0867 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.0127   -4.3309    1.9045 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.5263   -3.4677   -0.2019 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0312   -3.2865   -0.0211 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6360   -2.4743    0.8094 N   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9520   -2.5975    0.4971 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1318   -3.5017   -0.5365 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4058   -3.9477   -1.2189 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8866   -2.9615   -2.1866 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2244   -1.8992   -2.3384 O   0  0  0  0  0  0  0  0  0  0  0  0
   -5.0486   -3.2421   -2.8899 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8695   -3.9490   -0.8737 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6278   -4.9790   -1.9222 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5435   -6.3273   -1.2617 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5150   -6.4718   -0.2613 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7069   -6.7689   -0.5478 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.2184   -6.2751    1.0879 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1068   -1.8147    1.1019 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1155   -0.3421    0.7002 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0876    0.5281    0.7882 N   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4815    1.6758    0.2358 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8154    1.5504   -0.2191 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6525    2.6092   -0.8962 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2584    2.7811   -2.3043 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3542    2.1301   -2.8515 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.9484    3.7287   -3.0424 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2022    0.2785    0.0805 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.5851   -0.2617   -0.1702 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.4732   -0.1608    1.0361 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.0010   -0.8595    2.2192 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.2264   -0.2812    3.0202 O   0  0  0  0  0  0  0  0  0  0  0  0
   -6.3974   -2.1616    2.4740 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7074    2.9590    0.0069 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2218    2.8220   -0.1928 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4663    1.8753   -0.8488 N   0  0  0  0  0  0  0  0  0  0  0  0
    1.7735    2.1511   -0.6694 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9183    3.3014    0.1069 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1812    4.0099    0.5266 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7575    4.8030   -0.5466 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2224    4.8563   -1.6703 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.9149    5.5207   -0.3533 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.6594    3.7446    0.4220 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3039    4.9553    1.2334 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1561    6.0867    0.3817 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4968    7.2604    1.2295 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3658    7.1848    2.4714 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9618    8.4516    0.6888 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.9579    1.3219   -1.1377 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.3270    0.9385    0.8520 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.5971   -0.7976   -0.1828 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.9864    0.8273   -0.7915 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.6858    1.0715    1.3430 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.2934   -0.5959    1.8192 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2425   -0.9578   -1.7840 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.3200   -3.6034    1.8063 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.3608   -2.2498    2.4726 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.0435   -5.3230    1.6736 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.7682   -4.0812   -1.1233 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.9297   -4.1504    0.5780 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2092   -1.8511    1.6153 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2373   -4.9379   -1.6816 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1204   -4.1263   -0.3778 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.5916   -2.4616   -3.2854 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.3563   -4.7998   -2.4017 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4562   -5.0236   -2.6480 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4035   -7.1455   -2.0089 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5078   -6.5981   -0.7512 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.9373   -6.0943    1.7769 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0666   -2.2683    0.6820 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2787   -2.0097    2.1620 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1103    0.3311    1.2906 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4769    3.5419   -0.3325 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.7219    2.3442   -0.7833 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3892    4.3423   -3.6470 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.0665    0.3350   -0.9793 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.4561   -1.3079   -0.4894 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.6715    0.9179    1.3062 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.4843   -0.5291    0.6901 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.4100   -2.4667    3.4437 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9513    3.6254    0.8638 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1492    3.5623   -0.8449 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.0419    1.0520   -1.4662 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.9434    4.5529    1.4571 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.8925    3.1996    0.8627 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.3127    6.1581   -1.0293 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5159    4.6133    1.9209 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.1383    5.2159    1.8939 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.6974    6.4112   -0.2601 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9773    5.8278   -0.3036 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3987    8.9608    0.0175 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.8692    1.8142   -0.6802 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.2185    1.4920   -2.1883 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  0
  2  3  1  0
  2  4  1  0
  4  5  1  0
  5  6  1  0
  6  7  2  0
  7  8  1  0
  8  9  1  0
  9 10  2  0
 10 11  1  0
 11 12  1  0
 12 13  2  0
 12 14  1  0
  9 15  1  0
 15 16  1  0
 16 17  1  0
 17 18  1  0
 18 19  2  0
 19 20  1  0
 20 21  1  0
 21 22  2  0
 21 23  1  0
 19 24  1  0
 24 25  1  0
 25 26  1  0
 26 27  1  0
 27 28  2  0
 27 29  1  0
 18 30  1  0
 30 31  1  0
 31 32  1  0
 32 33  1  0
 33 34  2  0
 34 35  1  0
 35 36  1  0
 36 37  2  0
 36 38  1  0
 34 39  1  0
 39 40  1  0
 40 41  1  0
 41 42  1  0
 42 43  2  0
 42 44  1  0
 33 45  1  0
 45 46  1  0
 46 47  1  0
 47 48  1  0
 48 49  2  0
 49 50  1  0
 50 51  1  0
 51 52  2  0
 51 53  1  0
 49 54  1  0
 54 55  1  0
 55 56  1  0
 56 57  1  0
 57 58  2  0
 57 59  1  0
 48 60  1  0
 10  6  1  0
 24 16  2  0
 39 31  2  0
 54 46  2  0
 60  7  1  0
  3 61  1  0
  4 62  1  0
  4 63  1  0
  5 64  1  0
  5 65  1  0
  8 66  1  0
 11 67  1  0
 11 68  1  0
 14 69  1  0
 15 70  1  0
 15 71  1  0
 17 72  1  0
 20 73  1  0
 20 74  1  0
 23 75  1  0
 25 76  1  0
 25 77  1  0
 26 78  1  0
 26 79  1  0
 29 80  1  0
 30 81  1  0
 30 82  1  0
 32 83  1  0
 35 84  1  0
 35 85  1  0
 38 86  1  0
 40 87  1  0
 40 88  1  0
 41 89  1  0
 41 90  1  0
 44 91  1  0
 45 92  1  0
 45 93  1  0
 47 94  1  0
 50 95  1  0
 50 96  1  0
 53 97  1  0
 55 98  1  0
 55 99  1  0
 56100  1  0
 56101  1  0
 59102  1  0
 60103  1  0
 60104  1  0
M  END

HEADER    PROTEIN                                 23-FEB-12   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   23-FEB-12         0                                  
HETATM    1  O   UNK     0      54.796  -8.960   0.000  0.00  0.00           O+0
HETATM    2  O   UNK     0      55.999 -21.409   0.000  0.00  0.00           O+0
HETATM    3  O   UNK     0      42.495 -10.088   0.000  0.00  0.00           O+0
HETATM    4  O   UNK     0      43.388 -21.942   0.000  0.00  0.00           O+0
HETATM    5  O   UNK     0      57.787 -13.686   0.000  0.00  0.00           O+0
HETATM    6  O   UNK     0      47.206  -7.311   0.000  0.00  0.00           O+0
HETATM    7  O   UNK     0      51.215 -24.195   0.000  0.00  0.00           O+0
HETATM    8  O   UNK     0      40.556 -17.320   0.000  0.00  0.00           O+0
HETATM    9  O   UNK     0      52.615  -7.424   0.000  0.00  0.00           O+0
HETATM   10  O   UNK     0      57.605 -19.279   0.000  0.00  0.00           O+0
HETATM   11  O   UNK     0      40.880 -12.211   0.000  0.00  0.00           O+0
HETATM   12  O   UNK     0      45.367 -23.731   0.000  0.00  0.00           O+0
HETATM   13  O   UNK     0      41.889 -15.010   0.000  0.00  0.00           O+0
HETATM   14  O   UNK     0      48.772 -23.125   0.000  0.00  0.00           O+0
HETATM   15  O   UNK     0      49.649  -8.381   0.000  0.00  0.00           O+0
HETATM   16  O   UNK     0      56.757 -16.146   0.000  0.00  0.00           O+0
HETATM   17  N   UNK     0      49.185 -13.670   0.000  0.00  0.00           N+0
HETATM   18  N   UNK     0      51.549 -15.779   0.000  0.00  0.00           N+0
HETATM   19  N   UNK     0      46.921 -15.779   0.000  0.00  0.00           N+0
HETATM   20  N   UNK     0      49.236 -17.888   0.000  0.00  0.00           N+0
HETATM   21  C   UNK     0      45.927 -21.123   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0      43.526 -12.548   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0      54.958 -18.954   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0      52.376 -10.081   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0      50.842  -9.943   0.000  0.00  0.00           C+0
HETATM   26  C   UNK     0      55.146 -17.425   0.000  0.00  0.00           C+0
HETATM   27  C   UNK     0      43.331 -14.076   0.000  0.00  0.00           C+0
HETATM   28  C   UNK     0      47.433 -21.446   0.000  0.00  0.00           C+0
HETATM   29  C   UNK     0      43.223 -17.320   0.000  0.00  0.00           C+0
HETATM   30  C   UNK     0      50.920 -21.544   0.000  0.00  0.00           C+0
HETATM   31  C   UNK     0      47.501  -9.962   0.000  0.00  0.00           C+0
HETATM   32  C   UNK     0      55.141 -14.024   0.000  0.00  0.00           C+0
HETATM   33  C   UNK     0      46.511 -18.401   0.000  0.00  0.00           C+0
HETATM   34  C   UNK     0      46.460 -13.105   0.000  0.00  0.00           C+0
HETATM   35  C   UNK     0      52.013 -18.401   0.000  0.00  0.00           C+0
HETATM   36  C   UNK     0      51.961 -13.105   0.000  0.00  0.00           C+0
HETATM   37  C   UNK     0      44.894 -22.265   0.000  0.00  0.00           C+0
HETATM   38  C   UNK     0      42.300 -11.616   0.000  0.00  0.00           C+0
HETATM   39  C   UNK     0      56.187 -19.881   0.000  0.00  0.00           C+0
HETATM   40  C   UNK     0      53.262  -8.822   0.000  0.00  0.00           C+0
HETATM   41  C   UNK     0      56.562 -14.619   0.000  0.00  0.00           C+0
HETATM   42  C   UNK     0      48.119  -8.552   0.000  0.00  0.00           C+0
HETATM   43  C   UNK     0      50.302 -22.955   0.000  0.00  0.00           C+0
HETATM   44  C   UNK     0      41.889 -16.550   0.000  0.00  0.00           C+0
HETATM   45  C   UNK     0      50.471 -12.641   0.000  0.00  0.00           C+0
HETATM   46  C   UNK     0      52.475 -16.911   0.000  0.00  0.00           C+0
HETATM   47  C   UNK     0      46.047 -14.595   0.000  0.00  0.00           C+0
HETATM   48  C   UNK     0      48.001 -18.865   0.000  0.00  0.00           C+0
HETATM   49  C   UNK     0      52.423 -14.544   0.000  0.00  0.00           C+0
HETATM   50  C   UNK     0      47.950 -12.693   0.000  0.00  0.00           C+0
HETATM   51  C   UNK     0      50.471 -18.814   0.000  0.00  0.00           C+0
HETATM   52  C   UNK     0      46.047 -16.962   0.000  0.00  0.00           C+0
HETATM   53  C   UNK     0      49.956 -11.202   0.000  0.00  0.00           C+0
HETATM   54  C   UNK     0      53.916 -16.498   0.000  0.00  0.00           C+0
HETATM   55  C   UNK     0      44.557 -15.008   0.000  0.00  0.00           C+0
HETATM   56  C   UNK     0      48.465 -20.304   0.000  0.00  0.00           C+0
HETATM   57  C   UNK     0      44.557 -16.550   0.000  0.00  0.00           C+0
HETATM   58  C   UNK     0      50.007 -20.304   0.000  0.00  0.00           C+0
HETATM   59  C   UNK     0      48.414 -11.202   0.000  0.00  0.00           C+0
HETATM   60  C   UNK     0      53.916 -14.956   0.000  0.00  0.00           C+0
CONECT    1   40                                                            
CONECT    2   39                                                            
CONECT    3   38                                                            
CONECT    4   37                                                            
CONECT    5   41                                                            
CONECT    6   42                                                            
CONECT    7   43                                                            
CONECT    8   44                                                            
CONECT    9   40                                                            
CONECT   10   39                                                            
CONECT   11   38                                                            
CONECT   12   37                                                            
CONECT   13   44                                                            
CONECT   14   43                                                            
CONECT   15   42                                                            
CONECT   16   41                                                            
CONECT   17   45   50                                                       
CONECT   18   46   49                                                       
CONECT   19   47   52                                                       
CONECT   20   48   51                                                       
CONECT   21   28   37                                                       
CONECT   22   27   38                                                       
CONECT   23   26   39                                                       
CONECT   24   25   40                                                       
CONECT   25   24   53                                                       
CONECT   26   23   54                                                       
CONECT   27   22   55                                                       
CONECT   28   21   56                                                       
CONECT   29   44   57                                                       
CONECT   30   43   58                                                       
CONECT   31   42   59                                                       
CONECT   32   41   60                                                       
CONECT   33   48   52                                                       
CONECT   34   47   50                                                       
CONECT   35   46   51                                                       
CONECT   36   45   49                                                       
CONECT   37    4   12   21                                                  
CONECT   38    3   11   22                                                  
CONECT   39    2   10   23                                                  
CONECT   40    1    9   24                                                  
CONECT   41    5   16   32                                                  
CONECT   42    6   15   31                                                  
CONECT   43    7   14   30                                                  
CONECT   44    8   13   29                                                  
CONECT   45   17   36   53                                                  
CONECT   46   18   35   54                                                  
CONECT   47   19   34   55                                                  
CONECT   48   20   33   56                                                  
CONECT   49   18   36   60                                                  
CONECT   50   17   34   59                                                  
CONECT   51   20   35   58                                                  
CONECT   52   19   33   57                                                  
CONECT   53   25   45   59                                                  
CONECT   54   26   46   60                                                  
CONECT   55   27   47   57                                                  
CONECT   56   28   48   58                                                  
CONECT   57   29   52   55                                                  
CONECT   58   30   51   56                                                  
CONECT   59   31   50   53                                                  
CONECT   60   32   49   54                                                  
MASTER        0    0    0    0    0    0    0    0   60    0  128    0
END

COMPND    HMDB0002211
HETATM    1  O1  UNL     1       7.085   1.274   1.997  1.00  0.00           O  
HETATM    2  C1  UNL     1       7.284   0.876   0.823  1.00  0.00           C  
HETATM    3  O2  UNL     1       8.506   1.088   0.248  1.00  0.00           O  
HETATM    4  C2  UNL     1       6.158   0.174   0.089  1.00  0.00           C  
HETATM    5  C3  UNL     1       4.946   0.080   0.991  1.00  0.00           C  
HETATM    6  C4  UNL     1       3.787  -0.608   0.307  1.00  0.00           C  
HETATM    7  C5  UNL     1       2.926  -0.108  -0.662  1.00  0.00           C  
HETATM    8  N1  UNL     1       2.032  -1.068  -0.996  1.00  0.00           N  
HETATM    9  C6  UNL     1       2.295  -2.151  -0.263  1.00  0.00           C  
HETATM   10  C7  UNL     1       3.402  -1.906   0.576  1.00  0.00           C  
HETATM   11  C8  UNL     1       4.059  -2.822   1.555  1.00  0.00           C  
HETATM   12  C9  UNL     1       5.264  -3.476   1.074  1.00  0.00           C  
HETATM   13  O3  UNL     1       5.719  -3.335  -0.087  1.00  0.00           O  
HETATM   14  O4  UNL     1       6.013  -4.331   1.904  1.00  0.00           O  
HETATM   15  C10 UNL     1       1.526  -3.468  -0.202  1.00  0.00           C  
HETATM   16  C11 UNL     1       0.031  -3.286  -0.021  1.00  0.00           C  
HETATM   17  N2  UNL     1      -0.636  -2.474   0.809  1.00  0.00           N  
HETATM   18  C12 UNL     1      -1.952  -2.597   0.497  1.00  0.00           C  
HETATM   19  C13 UNL     1      -2.132  -3.502  -0.537  1.00  0.00           C  
HETATM   20  C14 UNL     1      -3.406  -3.948  -1.219  1.00  0.00           C  
HETATM   21  C15 UNL     1      -3.887  -2.961  -2.187  1.00  0.00           C  
HETATM   22  O5  UNL     1      -3.224  -1.899  -2.338  1.00  0.00           O  
HETATM   23  O6  UNL     1      -5.049  -3.242  -2.890  1.00  0.00           O  
HETATM   24  C16 UNL     1      -0.870  -3.949  -0.874  1.00  0.00           C  
HETATM   25  C17 UNL     1      -0.628  -4.979  -1.922  1.00  0.00           C  
HETATM   26  C18 UNL     1      -0.544  -6.327  -1.262  1.00  0.00           C  
HETATM   27  C19 UNL     1       0.515  -6.472  -0.261  1.00  0.00           C  
HETATM   28  O7  UNL     1       1.707  -6.769  -0.548  1.00  0.00           O  
HETATM   29  O8  UNL     1       0.218  -6.275   1.088  1.00  0.00           O  
HETATM   30  C20 UNL     1      -3.107  -1.815   1.102  1.00  0.00           C  
HETATM   31  C21 UNL     1      -3.116  -0.342   0.700  1.00  0.00           C  
HETATM   32  N3  UNL     1      -2.088   0.528   0.788  1.00  0.00           N  
HETATM   33  C22 UNL     1      -2.481   1.676   0.236  1.00  0.00           C  
HETATM   34  C23 UNL     1      -3.815   1.550  -0.219  1.00  0.00           C  
HETATM   35  C24 UNL     1      -4.653   2.609  -0.896  1.00  0.00           C  
HETATM   36  C25 UNL     1      -4.258   2.781  -2.304  1.00  0.00           C  
HETATM   37  O9  UNL     1      -3.354   2.130  -2.852  1.00  0.00           O  
HETATM   38  O10 UNL     1      -4.948   3.729  -3.042  1.00  0.00           O  
HETATM   39  C26 UNL     1      -4.202   0.279   0.081  1.00  0.00           C  
HETATM   40  C27 UNL     1      -5.585  -0.262  -0.170  1.00  0.00           C  
HETATM   41  C28 UNL     1      -6.473  -0.161   1.036  1.00  0.00           C  
HETATM   42  C29 UNL     1      -6.001  -0.860   2.219  1.00  0.00           C  
HETATM   43  O11 UNL     1      -5.226  -0.281   3.020  1.00  0.00           O  
HETATM   44  O12 UNL     1      -6.397  -2.162   2.474  1.00  0.00           O  
HETATM   45  C30 UNL     1      -1.707   2.959   0.007  1.00  0.00           C  
HETATM   46  C31 UNL     1      -0.222   2.822  -0.193  1.00  0.00           C  
HETATM   47  N4  UNL     1       0.466   1.875  -0.849  1.00  0.00           N  
HETATM   48  C32 UNL     1       1.774   2.151  -0.669  1.00  0.00           C  
HETATM   49  C33 UNL     1       1.918   3.301   0.107  1.00  0.00           C  
HETATM   50  C34 UNL     1       3.181   4.010   0.527  1.00  0.00           C  
HETATM   51  C35 UNL     1       3.758   4.803  -0.547  1.00  0.00           C  
HETATM   52  O13 UNL     1       3.222   4.856  -1.670  1.00  0.00           O  
HETATM   53  O14 UNL     1       4.915   5.521  -0.353  1.00  0.00           O  
HETATM   54  C36 UNL     1       0.659   3.745   0.422  1.00  0.00           C  
HETATM   55  C37 UNL     1       0.304   4.955   1.233  1.00  0.00           C  
HETATM   56  C38 UNL     1      -0.156   6.087   0.382  1.00  0.00           C  
HETATM   57  C39 UNL     1      -0.497   7.260   1.230  1.00  0.00           C  
HETATM   58  O15 UNL     1      -0.366   7.185   2.471  1.00  0.00           O  
HETATM   59  O16 UNL     1      -0.962   8.452   0.689  1.00  0.00           O  
HETATM   60  C40 UNL     1       2.958   1.322  -1.138  1.00  0.00           C  
HETATM   61  H1  UNL     1       9.327   0.938   0.852  1.00  0.00           H  
HETATM   62  H2  UNL     1       6.597  -0.798  -0.183  1.00  0.00           H  
HETATM   63  H3  UNL     1       5.986   0.827  -0.791  1.00  0.00           H  
HETATM   64  H4  UNL     1       4.686   1.071   1.343  1.00  0.00           H  
HETATM   65  H5  UNL     1       5.293  -0.596   1.819  1.00  0.00           H  
HETATM   66  H6  UNL     1       1.242  -0.958  -1.784  1.00  0.00           H  
HETATM   67  H7  UNL     1       3.320  -3.603   1.806  1.00  0.00           H  
HETATM   68  H8  UNL     1       4.361  -2.250   2.473  1.00  0.00           H  
HETATM   69  H9  UNL     1       6.043  -5.323   1.674  1.00  0.00           H  
HETATM   70  H10 UNL     1       1.768  -4.081  -1.123  1.00  0.00           H  
HETATM   71  H11 UNL     1       1.930  -4.150   0.578  1.00  0.00           H  
HETATM   72  H12 UNL     1      -0.209  -1.851   1.615  1.00  0.00           H  
HETATM   73  H13 UNL     1      -3.237  -4.938  -1.682  1.00  0.00           H  
HETATM   74  H14 UNL     1      -4.120  -4.126  -0.378  1.00  0.00           H  
HETATM   75  H15 UNL     1      -5.592  -2.462  -3.285  1.00  0.00           H  
HETATM   76  H16 UNL     1       0.356  -4.800  -2.402  1.00  0.00           H  
HETATM   77  H17 UNL     1      -1.456  -5.024  -2.648  1.00  0.00           H  
HETATM   78  H18 UNL     1      -0.404  -7.145  -2.009  1.00  0.00           H  
HETATM   79  H19 UNL     1      -1.508  -6.598  -0.751  1.00  0.00           H  
HETATM   80  H20 UNL     1       0.937  -6.094   1.777  1.00  0.00           H  
HETATM   81  H21 UNL     1      -4.067  -2.268   0.682  1.00  0.00           H  
HETATM   82  H22 UNL     1      -3.279  -2.010   2.162  1.00  0.00           H  
HETATM   83  H23 UNL     1      -1.110   0.331   1.291  1.00  0.00           H  
HETATM   84  H24 UNL     1      -4.477   3.542  -0.333  1.00  0.00           H  
HETATM   85  H25 UNL     1      -5.722   2.344  -0.783  1.00  0.00           H  
HETATM   86  H26 UNL     1      -4.389   4.342  -3.647  1.00  0.00           H  
HETATM   87  H27 UNL     1      -6.066   0.335  -0.979  1.00  0.00           H  
HETATM   88  H28 UNL     1      -5.456  -1.308  -0.489  1.00  0.00           H  
HETATM   89  H29 UNL     1      -6.672   0.918   1.306  1.00  0.00           H  
HETATM   90  H30 UNL     1      -7.484  -0.529   0.690  1.00  0.00           H  
HETATM   91  H31 UNL     1      -6.410  -2.467   3.444  1.00  0.00           H  
HETATM   92  H32 UNL     1      -1.951   3.625   0.864  1.00  0.00           H  
HETATM   93  H33 UNL     1      -2.149   3.562  -0.845  1.00  0.00           H  
HETATM   94  H34 UNL     1       0.042   1.052  -1.466  1.00  0.00           H  
HETATM   95  H35 UNL     1       2.943   4.553   1.457  1.00  0.00           H  
HETATM   96  H36 UNL     1       3.893   3.200   0.863  1.00  0.00           H  
HETATM   97  H37 UNL     1       5.313   6.158  -1.029  1.00  0.00           H  
HETATM   98  H38 UNL     1      -0.516   4.613   1.921  1.00  0.00           H  
HETATM   99  H39 UNL     1       1.138   5.216   1.894  1.00  0.00           H  
HETATM  100  H40 UNL     1       0.697   6.411  -0.260  1.00  0.00           H  
HETATM  101  H41 UNL     1      -0.977   5.828  -0.304  1.00  0.00           H  
HETATM  102  H42 UNL     1      -0.399   8.961   0.017  1.00  0.00           H  
HETATM  103  H43 UNL     1       3.869   1.814  -0.680  1.00  0.00           H  
HETATM  104  H44 UNL     1       3.218   1.492  -2.188  1.00  0.00           H  
CONECT    1    2    2
CONECT    2    3    4
CONECT    3   61
CONECT    4    5   62   63
CONECT    5    6   64   65
CONECT    6    7    7   10
CONECT    7    8   60
CONECT    8    9   66
CONECT    9   10   10   15
CONECT   10   11
CONECT   11   12   67   68
CONECT   12   13   13   14
CONECT   14   69
CONECT   15   16   70   71
CONECT   16   17   24   24
CONECT   17   18   72
CONECT   18   19   19   30
CONECT   19   20   24
CONECT   20   21   73   74
CONECT   21   22   22   23
CONECT   23   75
CONECT   24   25
CONECT   25   26   76   77
CONECT   26   27   78   79
CONECT   27   28   28   29
CONECT   29   80
CONECT   30   31   81   82
CONECT   31   32   39   39
CONECT   32   33   83
CONECT   33   34   34   45
CONECT   34   35   39
CONECT   35   36   84   85
CONECT   36   37   37   38
CONECT   38   86
CONECT   39   40
CONECT   40   41   87   88
CONECT   41   42   89   90
CONECT   42   43   43   44
CONECT   44   91
CONECT   45   46   92   93
CONECT   46   47   54   54
CONECT   47   48   94
CONECT   48   49   49   60
CONECT   49   50   54
CONECT   50   51   95   96
CONECT   51   52   52   53
CONECT   53   97
CONECT   54   55
CONECT   55   56   98   99
CONECT   56   57  100  101
CONECT   57   58   58   59
CONECT   59  102
CONECT   60  103  104
END

HMDB0002211
     RDKit          3D
Uroporphyrinogen I
104108  0  0  0  0  0  0  0  0999 V2000
    7.0854    1.2739    1.9971 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.2840    0.8761    0.8229 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.5059    1.0883    0.2477 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.1581    0.1744    0.0892 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.9460    0.0804    0.9909 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7875   -0.6077    0.3068 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9260   -0.1076   -0.6618 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0321   -1.0678   -0.9957 N   0  0  0  0  0  0  0  0  0  0  0  0
    2.2951   -2.1512   -0.2629 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4025   -1.9058    0.5758 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.0588   -2.8225    1.5552 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.2636   -3.4759    1.0741 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.7189   -3.3346   -0.0867 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.0127   -4.3309    1.9045 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.5263   -3.4677   -0.2019 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0312   -3.2865   -0.0211 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6360   -2.4743    0.8094 N   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9520   -2.5975    0.4971 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1318   -3.5017   -0.5365 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4058   -3.9477   -1.2189 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8866   -2.9615   -2.1866 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2244   -1.8992   -2.3384 O   0  0  0  0  0  0  0  0  0  0  0  0
   -5.0486   -3.2421   -2.8899 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8695   -3.9490   -0.8737 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6278   -4.9790   -1.9222 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5435   -6.3273   -1.2617 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5150   -6.4718   -0.2613 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7069   -6.7689   -0.5478 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.2184   -6.2751    1.0879 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1068   -1.8147    1.1019 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1155   -0.3421    0.7002 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0876    0.5281    0.7882 N   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4815    1.6758    0.2358 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8154    1.5504   -0.2191 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6525    2.6092   -0.8962 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2584    2.7811   -2.3043 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3542    2.1301   -2.8515 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.9484    3.7287   -3.0424 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2022    0.2785    0.0805 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.5851   -0.2617   -0.1702 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.4732   -0.1608    1.0361 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.0010   -0.8595    2.2192 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.2264   -0.2812    3.0202 O   0  0  0  0  0  0  0  0  0  0  0  0
   -6.3974   -2.1616    2.4740 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7074    2.9590    0.0069 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2218    2.8220   -0.1928 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4663    1.8753   -0.8488 N   0  0  0  0  0  0  0  0  0  0  0  0
    1.7735    2.1511   -0.6694 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9183    3.3014    0.1069 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1812    4.0099    0.5266 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7575    4.8030   -0.5466 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2224    4.8563   -1.6703 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.9149    5.5207   -0.3533 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.6594    3.7446    0.4220 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3039    4.9553    1.2334 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1561    6.0867    0.3817 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4968    7.2604    1.2295 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3658    7.1848    2.4714 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9618    8.4516    0.6888 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.9579    1.3219   -1.1377 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.3270    0.9385    0.8520 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.5971   -0.7976   -0.1828 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.9864    0.8273   -0.7915 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.6858    1.0715    1.3430 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.2934   -0.5959    1.8192 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2425   -0.9578   -1.7840 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.3200   -3.6034    1.8063 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.3608   -2.2498    2.4726 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.0435   -5.3230    1.6736 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.7682   -4.0812   -1.1233 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.9297   -4.1504    0.5780 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2092   -1.8511    1.6153 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2373   -4.9379   -1.6816 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1204   -4.1263   -0.3778 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.5916   -2.4616   -3.2854 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.3563   -4.7998   -2.4017 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4562   -5.0236   -2.6480 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4035   -7.1455   -2.0089 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5078   -6.5981   -0.7512 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.9373   -6.0943    1.7769 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0666   -2.2683    0.6820 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2787   -2.0097    2.1620 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1103    0.3311    1.2906 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4769    3.5419   -0.3325 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.7219    2.3442   -0.7833 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3892    4.3423   -3.6470 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.0665    0.3350   -0.9793 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.4561   -1.3079   -0.4894 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.6715    0.9179    1.3062 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.4843   -0.5291    0.6901 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.4100   -2.4667    3.4437 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9513    3.6254    0.8638 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1492    3.5623   -0.8449 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.0419    1.0520   -1.4662 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.9434    4.5529    1.4571 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.8925    3.1996    0.8627 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.3127    6.1581   -1.0293 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5159    4.6133    1.9209 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.1383    5.2159    1.8939 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.6974    6.4112   -0.2601 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9773    5.8278   -0.3036 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3987    8.9608    0.0175 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.8692    1.8142   -0.6802 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.2185    1.4920   -2.1883 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  0
  2  3  1  0
  2  4  1  0
  4  5  1  0
  5  6  1  0
  6  7  2  0
  7  8  1  0
  8  9  1  0
  9 10  2  0
 10 11  1  0
 11 12  1  0
 12 13  2  0
 12 14  1  0
  9 15  1  0
 15 16  1  0
 16 17  1  0
 17 18  1  0
 18 19  2  0
 19 20  1  0
 20 21  1  0
 21 22  2  0
 21 23  1  0
 19 24  1  0
 24 25  1  0
 25 26  1  0
 26 27  1  0
 27 28  2  0
 27 29  1  0
 18 30  1  0
 30 31  1  0
 31 32  1  0
 32 33  1  0
 33 34  2  0
 34 35  1  0
 35 36  1  0
 36 37  2  0
 36 38  1  0
 34 39  1  0
 39 40  1  0
 40 41  1  0
 41 42  1  0
 42 43  2  0
 42 44  1  0
 33 45  1  0
 45 46  1  0
 46 47  1  0
 47 48  1  0
 48 49  2  0
 49 50  1  0
 50 51  1  0
 51 52  2  0
 51 53  1  0
 49 54  1  0
 54 55  1  0
 55 56  1  0
 56 57  1  0
 57 58  2  0
 57 59  1  0
 48 60  1  0
 10  6  1  0
 24 16  2  0
 39 31  2  0
 54 46  2  0
 60  7  1  0
  3 61  1  0
  4 62  1  0
  4 63  1  0
  5 64  1  0
  5 65  1  0
  8 66  1  0
 11 67  1  0
 11 68  1  0
 14 69  1  0
 15 70  1  0
 15 71  1  0
 17 72  1  0
 20 73  1  0
 20 74  1  0
 23 75  1  0
 25 76  1  0
 25 77  1  0
 26 78  1  0
 26 79  1  0
 29 80  1  0
 30 81  1  0
 30 82  1  0
 32 83  1  0
 35 84  1  0
 35 85  1  0
 38 86  1  0
 40 87  1  0
 40 88  1  0
 41 89  1  0
 41 90  1  0
 44 91  1  0
 45 92  1  0
 45 93  1  0
 47 94  1  0
 50 95  1  0
 50 96  1  0
 53 97  1  0
 55 98  1  0
 55 99  1  0
 56100  1  0
 56101  1  0
 59102  1  0
 60103  1  0
 60104  1  0
M  END

Synonyms

Value	Source
3,8,13,18-Tetrakis(carboxymethyl)-5,10,15,20,22,24-hexahydroporphyrin-2,7,12,17-tetrapropionic acid	ChEBI
Uro'gen I	ChEBI
Uroporphyrinogen-I	ChEBI
3,8,13,18-Tetrakis(carboxymethyl)-5,10,15,20,22,24-hexahydroporphyrin-2,7,12,17-tetrapropionate	Generator
3,8,13,18-Tetrakis(carboxymethyl)-5,10,15,20,22,24-hexahydro-(8ci)-2,7,12,17-porphinetetrapropionate	HMDB
3,8,13,18-Tetrakis(carboxymethyl)-5,10,15,20,22,24-hexahydro-(8ci)-2,7,12,17-porphinetetrapropionic acid	HMDB
3,8,13,18-Tetrakis(carboxymethyl)-5,10,15,20,22,24-hexahydro-21H,23H-porphine-2,7,12,17-tetrapropanoate	HMDB
3,8,13,18-Tetrakis(carboxymethyl)-5,10,15,20,22,24-hexahydro-21H,23H-porphine-2,7,12,17-tetrapropanoic acid	HMDB
3,8,13,18-Tetrakis(carboxymethyl)-5,10,15,20,22,24-hexahydroporphyrin-2,7,12,17-tetrapropanoate	HMDB
3,8,13,18-Tetrakis(carboxymethyl)-5,10,15,20,22,24-hexahydroporphyrin-2,7,12,17-tetrapropanoic acid	HMDB

Molecular Formula

C₄₀H₄₄N₄O₁₆

Average Mass

836.7946

Monoisotopic Mass

836.27523138

IUPAC Name

3-[9,14,19-tris(2-carboxyethyl)-5,10,15,20-tetrakis(carboxymethyl)-21,22,23,24-tetraazapentacyclo[16.2.1.1³,⁶.1⁸,¹¹.1¹³,¹⁶]tetracosa-1(20),3,5,8,10,13,15,18-octaen-4-yl]propanoic acid

Traditional Name

uroporphyrinogen I

CAS Registry Number

1867-62-5

SMILES

OC(=O)CCC1=C2CC3=C(CC(O)=O)C(CCC(O)=O)=C(CC4=C(CC(O)=O)C(CCC(O)=O)=C(CC5=C(CC(O)=O)C(CCC(O)=O)=C(CC(N2)=C1CC(O)=O)N5)N4)N3

InChI Identifier

InChI=1S/C40H44N4O16/c45-33(46)5-1-17-21(9-37(53)54)29-14-26-19(3-7-35(49)50)23(11-39(57)58)31(43-26)16-28-20(4-8-36(51)52)24(12-40(59)60)32(44-28)15-27-18(2-6-34(47)48)22(10-38(55)56)30(42-27)13-25(17)41-29/h41-44H,1-16H2,(H,45,46)(H,47,48)(H,49,50)(H,51,52)(H,53,54)(H,55,56)(H,57,58)(H,59,60)

InChI Key

QTTNOSKSLATGQB-UHFFFAOYSA-N

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as porphyrins. Porphyrins are compounds containing a fundamental skeleton of four pyrrole nuclei united through the alpha-positions by four methine groups to form a macrocyclic structure.

Kingdom

Organic compounds

Super Class

Organoheterocyclic compounds

Class

Tetrapyrroles and derivatives

Sub Class

Porphyrins

Direct Parent

Porphyrins

Alternative Parents

Substituents

Porphyrin
Substituted pyrrole
Pyrrole
Heteroaromatic compound
Carboxylic acid derivative
Carboxylic acid
Azacycle
Carbonyl group
Hydrocarbon derivative
Organic oxide
Organopnictogen compound
Organooxygen compound
Organonitrogen compound
Organic oxygen compound
Organic nitrogen compound
Aromatic heteropolycyclic compound

Molecular Framework

Aromatic heteropolycyclic compounds

External Descriptors

uroporphyrinogen (CHEBI:28766 )
a porphyrin (CPD-11444 )

Functional Ontology

Not Available

Physical Properties

State

Solid

Predicted Properties

Property	Value	Source
Water Solubility	0.044 g/L	ALOGPS
logP	0.67	ALOGPS
logP	1.39	ChemAxon
logS	-4.3	ALOGPS
pKa (Strongest Acidic)	3.27	ChemAxon
Physiological Charge	-8	ChemAxon
Hydrogen Acceptor Count	16	ChemAxon
Hydrogen Donor Count	12	ChemAxon
Polar Surface Area	361.56 Å²	ChemAxon
Rotatable Bond Count	20	ChemAxon
Refractivity	206.93 m³·mol⁻¹	ChemAxon
Polarizability	84.05 Å³	ChemAxon
Number of Rings	5	ChemAxon
Bioavailability	No	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	Yes	ChemAxon

Spectra

Spectrum Type	Description	Splash Key	Deposition Date	View
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 10V, Positive	splash10-0gi0-0000000790-66d58d00c9ac805a86dd	2015-09-14	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 20V, Positive	splash10-05fr-0000000910-4ff4ea54a281f8d6b0d1	2015-09-14	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 40V, Positive	splash10-0adi-0000000900-919f095ae5cb2c3e6cd2	2015-09-14	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 10V, Negative	splash10-000i-0000000790-5f547e23817fab228be1	2015-09-15	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 20V, Negative	splash10-00y0-1000000940-4d4fc3a395b4bfdd41db	2015-09-15	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 40V, Negative	splash10-05fr-5000000900-f49d69c9724b023caf67	2015-09-15	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 10V, Positive	splash10-0g4i-0000000960-0125e055eb61d33157a3	2021-09-23	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 20V, Positive	splash10-000t-0000000910-6066cce322481af52283	2021-09-23	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 40V, Positive	splash10-000t-0000000900-a0d3dd169d62d3b9101a	2021-09-23	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 10V, Negative	splash10-0002-0000000900-e9ab543d3cd6074dec5d	2021-09-24	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 20V, Negative	splash10-0002-0000000900-d45cf1d17beafd43554e	2021-09-24	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 40V, Negative	splash10-00kb-0000000900-b910cfcdb3042465a8f1	2021-09-24	View Spectrum
MS	Mass Spectrum (Electron Ionization)	Not Available	2022-08-06	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 100 MHz, H₂O, predicted)		2022-08-22	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)		2022-08-22	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 1000 MHz, H₂O, predicted)		2022-08-22	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)		2022-08-22	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 200 MHz, H₂O, predicted)		2022-08-22	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)		2022-08-22	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 300 MHz, H₂O, predicted)		2022-08-22	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)		2022-08-22	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 400 MHz, H₂O, predicted)		2022-08-22	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)		2022-08-22	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 500 MHz, H₂O, predicted)		2022-08-22	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)		2022-08-22	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 600 MHz, H₂O, predicted)		2022-08-22	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)		2022-08-22	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 700 MHz, H₂O, predicted)		2022-08-22	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)		2022-08-22	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 800 MHz, H₂O, predicted)		2022-08-22	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)		2022-08-22	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 900 MHz, H₂O, predicted)		2022-08-22	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)		2022-08-22	View Spectrum

Biological Properties

Cellular Locations

Not Available

Biospecimen Locations

Feces
Testis

Tissue Locations

Testis

Associated OMIM IDs

114500 (Colorectal cancer)
610247 (Eosinophilic esophagitis)

Human Proteins and Enzymes

Protein ID	Protein Name	Protein Type	Uniprot ID	Species
MMDBp0191920	Uroporphyrinogen decarboxylase	Unknown	P06132	Homo sapiens
MMDBp0192025	Uroporphyrinogen-III synthase	Unknown	P10746	Homo sapiens

Human Pathways

Pathways

Name	SMPDB/PathBank

Metabolic Reactions

Reactions

Reaction ID	Precursor	Product	Enzyme	Data Source	Reference
MMDBr0002704	Uroporphyrinogen I	Coproporphyrinogen I	uroporphyrinogen decarboxylase	VMH	17360334
MMDBr0007216	Uroporphyrinogen I	Coproporphyrinogen I	Not Available	VMH	30371894
MMDBr0010305	Uroporphyrinogen I	Hydroxymethylbilane	Not Available	VMH; KEGG	30371894
MMDBr0010831	Uroporphyrinogen I	Coproporphyrinogen I	uroporphyrinogen decarboxylase	VMH; KEGG	30371894

Health Effects and Bioactivity

Health Outcome/Bioactivity	Metabolite Response/Effect	Evidence Type	Host and Biospecimen	Data Source	Reference

Microbial Sources

Superkingdom/Kingdom	Phylum	Total species	Hosts and Body Sites	Microbial Links
Bacteria	Proteobacteria	169	Human feces; Human sputum; Human ; Human unknown; Pig ; Human pleural fluid plaque; Human dental plaque; Human nasal swab; Human stool; Human feces; pleural fluid plaque; bal	Unknown; Metabolic reconstruction
Bacteria	Actinobacteria	60	Human feces; Human sputum; Human bronchial brush; Human nasopharyngeal swab; Human ; Human mucosa; Human supragingival plaque; Human subgingival plaque; Human saliva	Metabolic reconstruction
Bacteria	Firmicutes	88	Human feces; Human ; Human subgingival plaque	Metabolic reconstruction
Bacteria	Bacteroidetes	13	Human feces; Human ; Human supragingival plaque; Human subgingival plaque; Human saliva	Metabolic reconstruction
Archaea	Euryarchaeota	1		Metabolic reconstruction
Bacteria	Planctomycetes	1	Human feces	Metabolic reconstruction
Eukaryota/Fungi	Ascomycota	1	Human feces; Human saliva	Unknown

Exposure Sources

Source Type	Species	Data Source	Reference
Animal	Spirulina	FooDB	Manually Annotated
Animal	Lota lota	FooDB	Manually Annotated
Animal	Porphyra umbilicalis	FooDB	Manually Annotated
Animal	Chondrus crispus	FooDB	Manually Annotated
Animal	Laminaria	FooDB	Manually Annotated
Animal	Haliotis	FooDB	Manually Annotated
Animal	Strombidae	FooDB	Manually Annotated
Animal	Clupea harengus harengus	FooDB	Manually Annotated
Animal	Undaria pinnatifida	FooDB	Manually Annotated
Animal	Peprilus triacanthus	FooDB	Manually Annotated
Animal	Rhodophyta	FooDB	Manually Annotated
Animal	Myoxocephalus	FooDB	Manually Annotated
Animal	Eucheuma	FooDB	Manually Annotated
Animal	Saccharina japonica	FooDB	Manually Annotated
Plant	Piper nigrum	FooDB	Manually Annotated
Plant	Origanum onites	FooDB	Manually Annotated
Plant	Capsicum annuum	FooDB	Manually Annotated
Plant	Origanum vulgare	FooDB	Manually Annotated
Plant	Viburnum edule	FooDB	Manually Annotated
Plant	Dioscorea	FooDB	Manually Annotated
Plant	Brassica oleracea var. italica	FooDB	Manually Annotated
Plant	Momordica charantia	FooDB	Manually Annotated
Plant	Vaccinium uliginosum	FooDB	Manually Annotated
Plant	Castanea	FooDB	Manually Annotated
Plant	Rubus ursinus x idaeus	FooDB	Manually Annotated
Plant	Pleurotus ostreatus	FooDB	Manually Annotated
Plant	Cirsium	FooDB	Manually Annotated
Plant	Solanum melongena	FooDB	Manually Annotated
Plant	Opuntia	FooDB	Manually Annotated
Plant	Raphanus sativus var. sativus	FooDB	Manually Annotated
Plant	Colocasia esculenta	FooDB	Manually Annotated
Plant	Prunus persica var. persica	FooDB	Manually Annotated
Plant	Anthriscus cerefolium	FooDB	Manually Annotated
Plant	Nuphar lutea	FooDB	Manually Annotated
Plant	Lupinus albus	FooDB	Manually Annotated
Plant	Myristica fragrans	FooDB	Manually Annotated
Plant	Pachyrhizus erosus	FooDB	Manually Annotated
Plant	Cichorium endivia	FooDB	Manually Annotated
Plant	Apium graveolens	FooDB	Manually Annotated
Plant	Elaeis	FooDB	Manually Annotated
Plant	Cinnamomum	FooDB	Manually Annotated
Plant	Ribes uva-crispa	FooDB	Manually Annotated
Plant	Feijoa sellowiana	FooDB	Manually Annotated
Plant	Dysphania ambrosioides	FooDB	Manually Annotated
Plant	Raphanus sativus var. niger	FooDB	Manually Annotated
Plant	Photinia melanocarpa	FooDB	Manually Annotated
Plant	Salvia officinalis	FooDB	Manually Annotated
Plant	Rheum rhabarbarum	FooDB	Manually Annotated
Plant	Vaccinium	FooDB	Manually Annotated
Plant	Lablab purpureus	FooDB	Manually Annotated
Plant	Crocus sativus	FooDB	Manually Annotated
Plant	Citrus maxima	FooDB	Manually Annotated
Plant	Syzygium jambos	FooDB	Manually Annotated
Plant	Salix pulchra	FooDB	Manually Annotated
Plant	Castanea sativa	FooDB	Manually Annotated
Plant	Cydonia oblonga	FooDB	Manually Annotated
Plant	Annona muricata	FooDB	Manually Annotated
Plant	Fagus	FooDB	Manually Annotated
Plant	Cucurbita	FooDB	Manually Annotated
Plant	Opuntia cochenillifera	FooDB	Manually Annotated
Plant	Vaccinium ovatum	FooDB	Manually Annotated
Plant	Cocos nucifera	FooDB	Manually Annotated
Plant	Phaseolus coccineus	FooDB	Manually Annotated
Plant	Thymus pulegioides	FooDB	Manually Annotated
Plant	Tamarindus indica	FooDB	Manually Annotated
Plant	Mespilus germanica	FooDB	Manually Annotated
Plant	Brassica rapa var. perviridis	FooDB	Manually Annotated
Plant	Cucurbita pepo var. cylindrica	FooDB	Manually Annotated
Plant	Mentha aquatica	FooDB	Manually Annotated
Plant	Salvia elegans	FooDB	Manually Annotated
Plant	Mentha	FooDB	Manually Annotated
Plant	Sagittaria latifolia	FooDB	Manually Annotated
Plant	Solanum tuberosum	FooDB	Manually Annotated
Plant	Olea europaea	FooDB	Manually Annotated
Plant	Sambucus	FooDB	Manually Annotated
Plant	Pinus	FooDB	Manually Annotated
Plant	Psidium guajava	FooDB	Manually Annotated
Plant	Syzygium cumini	FooDB	Manually Annotated
Plant	Tilia tomentosa	FooDB	Manually Annotated
Plant	Typha angustifolia	FooDB	Manually Annotated
Plant	Daucus carota	FooDB	Manually Annotated
Plant	Empetrum nigrum	FooDB	Manually Annotated
Plant	Valerianella locusta	FooDB	Manually Annotated
Plant	Myrica rubra	FooDB	Manually Annotated
Plant	Vaccinium vitis-idaea	FooDB	Manually Annotated
Plant	Vaccinium angustifolium x vaccinium corymbosum	FooDB	Manually Annotated
Plant	Sisymbrium	FooDB	Manually Annotated
Plant	Vanilla	FooDB	Manually Annotated
Plant	Carya	FooDB	Manually Annotated
Plant	Brassica oleracea l. var. capitata l. f. alba dc.	FooDB	Manually Annotated
Plant	Physalis philadelphica var. immaculata	FooDB	Manually Annotated
Plant	Vigna radiata	FooDB	Manually Annotated
Plant	Borago officinalis	FooDB	Manually Annotated
Plant	Raphanus sativus	FooDB	Manually Annotated
Plant	Prunus dulcis	FooDB	Manually Annotated
Plant	Hyssopus officinalis	FooDB	Manually Annotated
Plant	Manihot esculenta	FooDB	Manually Annotated
Plant	Beta vulgaris ssp. cicla	FooDB	Manually Annotated
Plant	Scorzonera hispanica	FooDB	Manually Annotated
Plant	Vigna unguiculata ssp. sesquipedalis	FooDB	Manually Annotated
Plant	Angelica keiskei	FooDB	Manually Annotated
Plant	Ipomoea aquatica	FooDB	Manually Annotated
Plant	Musa x paradisiaca	FooDB	Manually Annotated
Plant	Cuminum cyminum	FooDB	Manually Annotated
Plant	Rubus spectabilis	FooDB	Manually Annotated
Plant	Allium sativum	FooDB	Manually Annotated
Plant	Arachis hypogaea	FooDB	Manually Annotated
Plant	Rubus idaeus	FooDB	Manually Annotated
Plant	Cantharellus cibarius	FooDB	Manually Annotated
Plant	Sinapis alba	FooDB	Manually Annotated
Plant	Fragaria x ananassa	FooDB	Manually Annotated
Plant	Pyrus communis	FooDB	Manually Annotated
Plant	Brassica ruvo	FooDB	Manually Annotated
Plant	Apium graveolens var. secalinum	FooDB	Manually Annotated
Plant	Morus nigra	FooDB	Manually Annotated
Plant	Solanum lycopersicum	FooDB	Manually Annotated
Plant	Abelmoschus esculentus	FooDB	Manually Annotated
Plant	Moringa oleifera	FooDB	Manually Annotated
Plant	Pinus edulis	FooDB	Manually Annotated
Plant	Passiflora edulis	FooDB	Manually Annotated
Plant	Opuntia macrorhiza	FooDB	Manually Annotated
Plant	Vigna angularis	FooDB	Manually Annotated
Plant	Manilkara zapota	FooDB	Manually Annotated
Plant	Cucurbita pepo var. clypeata	FooDB	Manually Annotated
Plant	Helianthus annuus	FooDB	Manually Annotated
Plant	Mentha spicata	FooDB	Manually Annotated
Plant	Corylus	FooDB	Manually Annotated
Plant	Malus	FooDB	Manually Annotated
Plant	Pisum sativum	FooDB	Manually Annotated
Plant	Sambucus nigra	FooDB	Manually Annotated
Plant	Allium cepa	FooDB	Manually Annotated
Plant	Juglans	FooDB	Manually Annotated
Plant	Mangifera indica	FooDB	Manually Annotated
Plant	Petroselinum crispum	FooDB	Manually Annotated
Plant	Ribes nigrum	FooDB	Manually Annotated
Plant	Zingiber officinale	FooDB	Manually Annotated
Plant	Chamaemelum nobile	FooDB	Manually Annotated
Plant	Illicium verum	FooDB	Manually Annotated
Plant		FooDB	Manually Annotated
Plant	Laurus nobilis	FooDB	Manually Annotated
Plant	Auricularia auricula-judae	FooDB	Manually Annotated
Plant	Attalea speciosa	FooDB	Manually Annotated
Plant	Juglans ailanthifolia	FooDB	Manually Annotated
Plant	Melissa officinalis	FooDB	Manually Annotated
Plant	Hippophae rhamnoides	FooDB	Manually Annotated
Plant	Polygonum alpinum	FooDB	Manually Annotated
Plant	Brassica juncea	FooDB	Manually Annotated
Plant	Pediomelum esculentum	FooDB	Manually Annotated
Plant	Spinacia oleracea	FooDB	Manually Annotated
Plant	Auricularia polytricha	FooDB	Manually Annotated
Plant	Camellia oleifera	FooDB	Manually Annotated
Plant	Vaccinium corymbosum	FooDB	Manually Annotated
Plant	Chrysanthemum coronarium	FooDB	Manually Annotated
Plant	Eleocharis dulcis	FooDB	Manually Annotated
Plant	Thymus vulgaris	FooDB	Manually Annotated
Plant	Actinidia chinensis	FooDB	Manually Annotated
Plant	Carica papaya	FooDB	Manually Annotated
Plant	Pimenta dioica	FooDB	Manually Annotated
Plant	Medicago sativa	FooDB	Manually Annotated
Plant	Vigna mungo	FooDB	Manually Annotated
Plant	Rubus arcticus	FooDB	Manually Annotated
Plant	Agaricus bisporus	FooDB	Manually Annotated
Plant	Cajanus cajan	FooDB	Manually Annotated
Plant	Rumex articus	FooDB	Manually Annotated
Plant	Origanum majorana	FooDB	Manually Annotated
Plant	Armoracia rusticana	FooDB	Manually Annotated
Plant	Hibiscus sabdariffa	FooDB	Manually Annotated
Plant	Benincasa hispida	FooDB	Manually Annotated
Plant	Prunus persica	FooDB	Manually Annotated
Plant	Canarium ovatum	FooDB	Manually Annotated
Plant	Ribes aureum var. villosum	FooDB	Manually Annotated
Plant	Cucurbita pepo var. cylindrica	FooDB	Manually Annotated
Plant	Brassica oleracea var. gemmifera	FooDB	Manually Annotated
Plant	Foeniculum vulgare	FooDB	Manually Annotated
Plant	Phoenix dactylifera	FooDB	Manually Annotated
Plant	Vaccinium macrocarpon	FooDB	Manually Annotated
Plant		FooDB	Manually Annotated
Plant	Arctium lappa	FooDB	Manually Annotated
Plant	Brassica oleracea var. gongylodes	FooDB	Manually Annotated
Plant	Juglans cinerea	FooDB	Manually Annotated
Plant	Prunus cerasus	FooDB	Manually Annotated
Plant	Eruca vesicaria ssp. sativa	FooDB	Manually Annotated
Plant	Rosmarinus officinalis	FooDB	Manually Annotated
Plant	Artocarpus altilis	FooDB	Manually Annotated
Plant	Citrus x paradisi	FooDB	Manually Annotated
Plant	Vigna unguiculata	FooDB	Manually Annotated
Plant	Cynara scolymus	FooDB	Manually Annotated
Plant	Cyathea	FooDB	Manually Annotated
Plant	Metroxylon sagu	FooDB	Manually Annotated
Plant	Vitis rotundifolia	FooDB	Manually Annotated
Plant	Brosimum alicastrum	FooDB	Manually Annotated
Plant	Ficus carica	FooDB	Manually Annotated
Plant	Lentinus edodes	FooDB	Manually Annotated
Plant	Psidium cattleianum	FooDB	Manually Annotated
Plant	Beta vulgaris var. rubra	FooDB	Manually Annotated
Plant	Castanea mollissima	FooDB	Manually Annotated
Plant	Lepidium sativum	FooDB	Manually Annotated
Plant	Morus	FooDB	Manually Annotated
Plant	Helianthus tuberosus	FooDB	Manually Annotated
Plant	Phytolacca americana	FooDB	Manually Annotated
Plant	Grifola frondosa	FooDB	Manually Annotated
Plant	Vitis labrusca	FooDB	Manually Annotated
Plant	Tetragonia tetragonioides	FooDB	Manually Annotated
Plant	Artemisia vulgaris	FooDB	Manually Annotated
Plant	Cucumis metuliferus	FooDB	Manually Annotated
Plant	Nephelium lappaceum	FooDB	Manually Annotated
Plant	Myrica	FooDB	Manually Annotated
Plant		FooDB	Manually Annotated
Plant	Corylus avellana	FooDB	Manually Annotated
Plant	Castanea crenata	FooDB	Manually Annotated
Plant	Litchi chinensis	FooDB	Manually Annotated
Plant	Juglans regia	FooDB	Manually Annotated
Plant	Quercus	FooDB	Manually Annotated
Plant	Trigonella foenum-graecum	FooDB	Manually Annotated
Plant	Vaccinium angustifolium	FooDB	Manually Annotated
Plant	Malpighia emarginata	FooDB	Manually Annotated
Plant	Physalis	FooDB	Manually Annotated
Plant	Brassica oleracea var. sabauda	FooDB	Manually Annotated
Plant	Thelesperma	FooDB	Manually Annotated
Plant	Brassica napus	FooDB	Manually Annotated
Plant	Asparagus officinalis	FooDB	Manually Annotated
Plant	Chamerion angustifolium	FooDB	Manually Annotated
Plant	Levisticum officinale	FooDB	Manually Annotated
Plant	Pimpinella anisum	FooDB	Manually Annotated
Plant	Vaccinium elliottii	FooDB	Manually Annotated
Plant	Artemisia dracunculus	FooDB	Manually Annotated
Plant	Matricaria recutita	FooDB	Manually Annotated
Plant	Citrus aurantiifolia	FooDB	Manually Annotated
Plant	Ziziphus zizyphus	FooDB	Manually Annotated
Plant	Lactuca sativa	FooDB	Manually Annotated
Plant	Dimocarpus longan	FooDB	Manually Annotated
Plant	Eragrostis tef	FooDB	Manually Annotated
Plant	Salvia hispanica	FooDB	Manually Annotated
Plant	Pistacia vera	FooDB	Manually Annotated
Plant	Cynara cardunculus	FooDB	Manually Annotated
Plant	Vitellaria paradoxa	FooDB	Manually Annotated
Plant	Pangium edule	FooDB	Manually Annotated
Plant	Malus pumila	FooDB	Manually Annotated
Plant	Allium	FooDB	Manually Annotated
Plant	Brassica oleracea var. viridis	FooDB	Manually Annotated
Plant	Punica granatum	FooDB	Manually Annotated
Plant	Agave	FooDB	Manually Annotated
Plant	Hedysarum alpinum	FooDB	Manually Annotated
Plant	Diospyros	FooDB	Manually Annotated
Plant		FooDB	Manually Annotated
Plant	Vigna aconitifolia	FooDB	Manually Annotated
Plant	Amaranthus	FooDB	Manually Annotated
Plant	Gossypium	FooDB	Manually Annotated
Plant	Beta vulgaris	FooDB	Manually Annotated
Plant	Mammea americana	FooDB	Manually Annotated
Plant	Brassica alboglabra	FooDB	Manually Annotated
Plant	Annona squamosa	FooDB	Manually Annotated
Plant	Apium graveolens var. dulce	FooDB	Manually Annotated
Plant	Vitis	FooDB	Manually Annotated
Plant	Xanthosoma sagittifolium	FooDB	Manually Annotated
Plant	Basella alba	FooDB	Manually Annotated
Plant	Cucumis sativus	FooDB	Manually Annotated
Plant	Citrus latifolia	FooDB	Manually Annotated
Plant	Carya illinoinensis	FooDB	Manually Annotated
Plant	Capsicum baccatum var. baccatum	FooDB	Manually Annotated
Plant	Byrsonima crassifolia	FooDB	Manually Annotated
Plant	Capsicum pubescens	FooDB	Manually Annotated
Plant	Cinnamomum aromaticum	FooDB	Manually Annotated
Plant	Ribes rubrum	FooDB	Manually Annotated
Plant	Crateva religiosa	FooDB	Manually Annotated
Plant		FooDB	Manually Annotated
Plant	Vitis aestivalis	FooDB	Manually Annotated
Plant	Brassica rapa var. chinensis	FooDB	Manually Annotated
Plant	Eugenia javanica	FooDB	Manually Annotated
Plant	Portulaca oleracea	FooDB	Manually Annotated
Plant	Ipomoea batatas	FooDB	Manually Annotated
Plant	Mentha arvensis	FooDB	Manually Annotated
Plant	Pastinaca sativa	FooDB	Manually Annotated
Plant	Cucurbita maxima	FooDB	Manually Annotated
Plant	Vaccinium stamineum	FooDB	Manually Annotated
Plant	Solanum lycopersicum var. cerasiforme	FooDB	Manually Annotated
Plant	Chenopodium album	FooDB	Manually Annotated
Plant	Psophocarpus tetragonolobus	FooDB	Manually Annotated
Plant	Allium ampeloprasum	FooDB	Manually Annotated
Plant	Brassica oleracea	FooDB	Manually Annotated
Plant	Sechium edule	FooDB	Manually Annotated
Plant	Lactuca sativa l. var. longifolia	FooDB	Manually Annotated
Plant	Grataegosorbus mitschurinii	FooDB	Manually Annotated
Plant	Diospyros virginiana	FooDB	Manually Annotated
Plant	Origanum x majoricum	FooDB	Manually Annotated
Plant	Rubus x loganobaccus	FooDB	Manually Annotated
Plant	Tragopogon porrifolius	FooDB	Manually Annotated
Plant	Taraxacum officinale	FooDB	Manually Annotated
Plant	Rumex	FooDB	Manually Annotated
Plant	Allium ascalonicum	FooDB	Manually Annotated
Plant	Curcuma longa	FooDB	Manually Annotated
Plant	Rubus chamaemorus	FooDB	Manually Annotated
Plant	Elettaria cardamomum	FooDB	Manually Annotated
Plant	Citrullus lanatus var. fistulosus	FooDB	Manually Annotated
Plant	Ananas comosus	FooDB	Manually Annotated
Plant	Persea americana	FooDB	Manually Annotated
Plant	Amelanchier alnifolia	FooDB	Manually Annotated
Plant	Eugenia uniflora	FooDB	Manually Annotated
Plant	Annona reticulata	FooDB	Manually Annotated
Plant	Cichorium intybus	FooDB	Manually Annotated
Plant	Sesbania bispinosa	FooDB	Manually Annotated
Plant	Chenopodium quinoa	FooDB	Manually Annotated
Plant	Brassica oleracea var. botrytis	FooDB	Manually Annotated
Plant	Ribes x nidigrolaria	FooDB	Manually Annotated
Plant	Garcinia mangostana	FooDB	Manually Annotated
Plant	Cucumis melo	FooDB	Manually Annotated
Plant	Dioscorea pentaphylla	FooDB	Manually Annotated
Plant	Corchorus olitorius	FooDB	Manually Annotated
Plant	Juglans nigra	FooDB	Manually Annotated
Plant	Lathyrus sativus	FooDB	Manually Annotated
Plant	Allium tuberosum	FooDB	Manually Annotated
Plant	Cinnamomum verum	FooDB	Manually Annotated
Plant	Glycine max	FooDB	Manually Annotated
Plant	Gaylussacia baccata	FooDB	Manually Annotated
Plant	Petasites japonicus	FooDB	Manually Annotated
Plant	Prunus tomentosa	FooDB	Manually Annotated
Plant	Ocimum basilicum	FooDB	Manually Annotated
Plant	Mentha x piperita	FooDB	Manually Annotated
Plant	Maranta arundinacea	FooDB	Manually Annotated
Plant	Matteuccia struthiopteris	FooDB	Manually Annotated
Plant	Cucurbita moschata	FooDB	Manually Annotated
Plant	Macadamia	FooDB	Manually Annotated
Plant	Tilia	FooDB	Manually Annotated
Plant	Citrus limon	FooDB	Manually Annotated
Plant	Vaccinium myrtilloides	FooDB	Manually Annotated
Plant	Capsicum annuum var. annuum	FooDB	Manually Annotated
Plant	Apium graveolens var. rapaceum	FooDB	Manually Annotated
Plant	Papaver	FooDB	Manually Annotated
Plant	Rosa	FooDB	Manually Annotated
Plant	Nelumbo	FooDB	Manually Annotated
Plant	Brassica oleracea var. conica	FooDB	Manually Annotated
Plant	Sesamum orientale	FooDB	Manually Annotated
Plant	Annona cherimola	FooDB	Manually Annotated
Plant	Brassica rapa var. pekinensis	FooDB	Manually Annotated
Plant	Brassica rapa	FooDB	Manually Annotated
Plant	Lippia graveolens	FooDB	Manually Annotated
Plant	Prunus	FooDB	Manually Annotated
Plant	Capparis spinosa	FooDB	Manually Annotated
Plant	Citrus sinensis	FooDB	Manually Annotated
Plant	Lens culinaris	FooDB	Manually Annotated
Plant	Vaccinium deliciosum	FooDB	Manually Annotated
Plant	Phaseolus lunatus	FooDB	Manually Annotated
Plant	Artocarpus heterophyllus	FooDB	Manually Annotated
Plant	Prunus virginiana	FooDB	Manually Annotated
Plant	Musa acuminata	FooDB	Manually Annotated
Plant	Citrullus lanatus	FooDB	Manually Annotated
Plant	Linum usitatissimum	FooDB	Manually Annotated
Plant	Vigna unguiculata ssp. unguiculata	FooDB	Manually Annotated
Plant	Macadamia tetraphylla	FooDB	Manually Annotated
Plant	Phyllostachys edulis	FooDB	Manually Annotated
Plant	Lagenaria siceraria	FooDB	Manually Annotated
Plant	Prunus domestica	FooDB	Manually Annotated
Plant	Prunus armeniaca	FooDB	Manually Annotated
Plant	Carum carvi	FooDB	Manually Annotated
Plant	Allium schoenoprasum	FooDB	Manually Annotated
Plant	Carissa macrocarpa	FooDB	Manually Annotated
Plant	Citrus reticulata	FooDB	Manually Annotated
Plant	Satureja hortensis	FooDB	Manually Annotated
Plant	Averrhoa carambola	FooDB	Manually Annotated
Plant	Brassica rapa var. rapa	FooDB	Manually Annotated
Plant	Sorbus aucuparia	FooDB	Manually Annotated
Plant	Anethum graveolens	FooDB	Manually Annotated
Plant	Nelumbo nucifera	FooDB	Manually Annotated
Plant	Coriandrum sativum	FooDB	Manually Annotated
Plant	Bertholletia excelsa	FooDB	Manually Annotated
Plant	Brassica oleracea var. costata	FooDB	Manually Annotated
Plant	Panax	FooDB	Manually Annotated
Plant	Ceratonia siliqua	FooDB	Manually Annotated
Plant	Cymbopogon citratus	FooDB	Manually Annotated
Plant	Luffa aegyptiaca	FooDB	Manually Annotated
Plant	Anacardium occidentale	FooDB	Manually Annotated
Plant	Carthamus tinctorius	FooDB	Manually Annotated
Plant	Rubus occidentalis	FooDB	Manually Annotated
Plant	Vigna umbellata	FooDB	Manually Annotated
Plant	Cicer arietinum	FooDB	Manually Annotated
Plant	Allium fistulosum	FooDB	Manually Annotated
Plant	Capsicum	FooDB	Manually Annotated
Plant	Vaccinium alaskaense	FooDB	Manually Annotated
Plant	Lupinus	FooDB	Manually Annotated
Plant	Tilia cordata	FooDB	Manually Annotated
Plant	Camellia sinensis	FooDB	Manually Annotated
Plant	Prunus persica var. nucipersica	FooDB	Manually Annotated
Plant	Durio zibethinus	FooDB	Manually Annotated
Plant	Eriobotrya japonica	FooDB	Manually Annotated
Plant	Solanum lycopersicum var. lycopersicum	FooDB	Manually Annotated
Plant	Brassica napus var. pabularia	FooDB	Manually Annotated
Plant	Oenothera biennis	FooDB	Manually Annotated
Plant	Diospyros kaki	FooDB	Manually Annotated
Plant	Ribes glandulosum	FooDB	Manually Annotated
Plant	Phaseolus vulgaris	FooDB	Manually Annotated
Plant	Theobroma cacao	FooDB	Manually Annotated
Plant	Virola surinamensis	FooDB	Manually Annotated
Plant	Verbena officinalis	FooDB	Manually Annotated
Plant	Daucus carota ssp. sativus	FooDB	Manually Annotated
Plant	Vaccinium oxycoccos	FooDB	Manually Annotated
Plant	Rumex acetosa	FooDB	Manually Annotated
Plant	Syzygium aromaticum	FooDB	Manually Annotated
Plant	Pyrus pyrifolia	FooDB	Manually Annotated
Plant	Vaccinium myrtillus	FooDB	Manually Annotated
Plant	Vaccinium parvifolium	FooDB	Manually Annotated
Plant	Aloysia triphylla	FooDB	Manually Annotated
Plant	Brassica oleracea var. capitata	FooDB	Manually Annotated
Plant	Capsicum chinense	FooDB	Manually Annotated
Plant	Vicia faba	FooDB	Manually Annotated
Plant	Vaccinium reticulatum	FooDB	Manually Annotated
Plant	Solanum quitoense	FooDB	Manually Annotated
Plant	Ginkgo biloba	FooDB	Manually Annotated
Plant	Theobroma grandiflorum	FooDB	Manually Annotated
Plant	Vigna unguiculata ssp. cylindrica	FooDB	Manually Annotated
Plant	Flammulina velutipes	FooDB	Manually Annotated
Plant	Satureja montana	FooDB	Manually Annotated
Plant		FooDB	Manually Annotated
Plant	Vitis vinifera	FooDB	Manually Annotated
Plant	Citrus japonica	FooDB	Manually Annotated
Plant	Prunus avium	FooDB	Manually Annotated
Plant	Perideridia oregana	FooDB	Manually Annotated
Plant	Vaccinium arboreum	FooDB	Manually Annotated
Plant	Pouteria sapota	FooDB	Manually Annotated
Plant	Wasabia japonica	FooDB	Manually Annotated

Host Biospecimen and Location

Host and Biospecimen	Status	Mean	Std	Min	Max	Units	Age	Sex	Health Condition	Data Source	Reference
Human Feces	Detected but not Quantified									HMDB
Human Testis	Detected but not Quantified						Not Specified	Not Specified	Normal	HMDB	34986597

External Links

HMDB ID

HMDB0002211

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FooDB ID

KNApSAcK ID

Chemspider ID

KEGG Compound ID

BioCyc ID

BiGG ID

Not Available

Wikipedia Link

Uroporphyrinogen I

METLIN ID

6550

PubChem Compound

440775

PDB ID

Not Available

ChEBI ID

28766

Food Biomarker Ontology

Not Available

References

Synthesis Reference

Not Available

General References

Mukerji SK, Pimstone NR: Defective human erythrocyte uroporphyrinogen decarboxylase in familial porphyria cutanea tarda: the metabolic lesion or the result of endogenous porphyrinemia? Biochem Biophys Res Commun. 1988 Jul 15;154(1):39-46. doi: 10.1016/0006-291x(88)90646-8. [PubMed:3395340 ]
Maines MD, Mayer RD: Inhibition of testicular cytochrome P-450-dependent steroid biosynthesis by cis-platinum. Reversal by human chorionic gonadotropin. J Biol Chem. 1985 May 25;260(10):6063-8. [PubMed:4039724 ]

Showing metabocard for Uroporphyrinogen I (MMDBc0029688)

MOL for #<Metabolite:0x00007fdb748da688>

3D MOL for #<Metabolite:0x00007fdb748da688>

3D SDF for #<Metabolite:0x00007fdb748da688>

3D-SDF for #<Metabolite:0x00007fdb748da688>

PDB for #<Metabolite:0x00007fdb748da688>

3D PDB for #<Metabolite:0x00007fdb748da688>

SMILES for #<Metabolite:0x00007fdb748da688>

INCHI for #<Metabolite:0x00007fdb748da688>

Structure for #<Metabolite:0x00007fdb748da688>

3D Structure for #<Metabolite:0x00007fdb748da688>