| MMDBm0098246 | [Candida] glabrata CBS 138 | Fungi | Ascomycota | Not Available | Not Available | RHEA |
| MMDBm0002045 | Zymomonas mobilis subsp. mobilis ZM4 | Bacteria | Proteobacteria | Not Available | Not Available | RHEA |
| MMDBm0002778 | Yersinia pseudotuberculosis IP 32953 | Bacteria | Proteobacteria | Not Available | Not Available | RHEA |
| MMDBm0562461 | Yersinia pestis | Bacteria | Proteobacteria | Human | Not Available | RHEA |
| MMDBm0096592 | Yarrowia lipolytica CLIB122 | Fungi | Ascomycota | Not Available | Not Available | RHEA |
| MMDBm0002772 | Xylella fastidiosa Temecula1 | Bacteria | Proteobacteria | Not Available | Not Available | RHEA |
| MMDBm0002771 | Xylella fastidiosa 9a5c | Bacteria | Proteobacteria | Not Available | Not Available | RHEA |
| MMDBm0002762 | Xanthomonas oryzae pv. oryzae KACC10331 | Bacteria | Proteobacteria | Not Available | Not Available | RHEA |
| MMDBm0002761 | Xanthomonas campestris pv. campestris str. ATCC 33913 | Bacteria | Proteobacteria | Not Available | Not Available | RHEA |
| MMDBm0002763 | Xanthomonas campestris pv. campestris str. 8004 | Bacteria | Proteobacteria | Not Available | Not Available | RHEA |
| MMDBm0001972 | Xanthomonas axonopodis pv. citri str. 306 | Bacteria | Proteobacteria | Not Available | Not Available | RHEA |
| MMDBm0002759 | Wolinella succinogenes DSM 1740 | Bacteria | Proteobacteria | Cattle | Not Available | RHEA |
| MMDBm0001970 | Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis | Bacteria | Proteobacteria | Not Available | Not Available | RHEA |
| MMDBm0002742 | Vibrio vulnificus YJ016 | Bacteria | Proteobacteria | Human | Not Available | RHEA |
| MMDBm0002740 | Vibrio vulnificus CMCP6 | Bacteria | Proteobacteria | Human | Not Available | RHEA |
| MMDBm0002741 | Vibrio parahaemolyticus RIMD 2210633 | Bacteria | Proteobacteria | Human | Not Available | RHEA |
| MMDBm0002739 | Vibrio cholerae O1 biovar El Tor str. N16961 | Bacteria | Proteobacteria | Human | Not Available | RHEA |
| MMDBm0002737 | Verminephrobacter eiseniae EF01-2 | Bacteria | Proteobacteria | Not Available | Not Available | RHEA |
| MMDBm0156399 | Ustilago maydis 521 | Fungi | Basidiomycota | Not Available | Not Available | RHEA |
| MMDBm0094060 | Tuber melanosporum Mel28 | Fungi | Ascomycota | Not Available | Not Available | RHEA |
| MMDBm0001975 | Tropheryma whipplei TW08/27 | Bacteria | Actinobacteria | Not Available | Not Available | RHEA |
| MMDBm0001976 | Tropheryma whipplei str. Twist | Bacteria | Actinobacteria | Human Feces | Not Available | RHEA |
| MMDBm0002723 | Treponema pallidum subsp. pallidum str. Nichols | Bacteria | Spirochaetes | Human | Not Available | RHEA |
| MMDBm0002725 | Treponema pallidum subsp. pallidum SS14 | Bacteria | Spirochaetes | Human | Not Available | RHEA |
| MMDBm0002724 | Treponema denticola ATCC 35405 | Bacteria | Spirochaetes | Human | Not Available | RHEA |
