| MMDBm0064156 | Fusarium graminearum PH-1 | Fungi | Ascomycota | Not Available | Not Available | RHEA |
| MMDBm0019053 | Pyrenophora teres f. teres 0-1 | Fungi | Ascomycota | Not Available | Not Available | RHEA |
| MMDBm0050480 | Botrytis cinerea T4 | Fungi | Ascomycota | Not Available | Not Available | RHEA |
| MMDBm0014524 | Leptosphaeria maculans | Fungi | Ascomycota | Human Feces | Not Available | RHEA |
| MMDBm0029062 | Aspergillus nidulans FGSC A4 | Fungi | Ascomycota | Not Available | Not Available | RHEA |
| MMDBm0144899 | Stereum hirsutum FP-91666 SS1 | Fungi | Basidiomycota | Not Available | Not Available | RHEA |
| MMDBm0084823 | Microdochium sorghi | Fungi | Ascomycota | Not Available | Not Available | RHEA |
| MMDBm0101577 | Schizosaccharomyces pombe 972h- | Fungi | Ascomycota | Not Available | Not Available | RHEA |
| MMDBm0064341 | Fusarium solani | Fungi | Ascomycota | Not Available | Not Available | RHEA |
| MMDBm0120824 | Armillaria gallica | Fungi | Basidiomycota | Not Available | Not Available | RHEA |
| MMDBm0082117 | Neurospora crassa OR74A | Fungi | Ascomycota | Not Available | Not Available | RHEA |
| MMDBm0015828 | Alternaria brassicicola | Fungi | Ascomycota | Not Available | Not Available | RHEA |
| MMDBm0098378 | Saccharomyces cerevisiae S288C | Fungi | Ascomycota | Not Available | Not Available | RHEA |
| MMDBm0063711 | Fusarium lateritium | Fungi | Ascomycota | Not Available | Not Available | RHEA |
| MMDBm0031184 | Penicillium rubens Wisconsin 54-1255 | Fungi | Ascomycota | Not Available | Not Available | RHEA |
| MMDBm0028950 | Aspergillus niger | Fungi | Ascomycota | Human Feces | Not Available | RHEA |
| MMDBm0001673 | Haloferax volcanii DS2 | Archaea | Euryarchaeota | Not Available | Not Available | RHEA |
| MMDBm0001849 | Methanothermobacter thermautotrophicus str. Delta H | Archaea | Euryarchaeota | Not Available | Not Available | RHEA |
| MMDBm0000012 | Agrobacterium tumefaciens F2 | Bacteria | Proteobacteria | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0774625 | Mammaliicoccus sciuri | Bacteria | Firmicutes | Human | Metabolic reconstruction | VMH |
| MMDBm0001255 | Bacillus licheniformis ATCC 14580 | Bacteria | Firmicutes | Human | Metabolic reconstruction | VMH |
| MMDBm0002394 | Pseudomonas syringae pv. tomato str. DC3000 | Bacteria | Proteobacteria | Not Available | Not Available | RHEA |
| MMDBm0001586 | Escherichia coli 536 | Bacteria | Proteobacteria | Human | Not Available | RHEA |
| MMDBm0665710 | Dermacoccus nishinomiyaensis | Bacteria | Actinobacteria | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0533435 | Citrobacter freundii UCI 31 | Bacteria | Proteobacteria | Human Feces | Metabolic reconstruction | VMH |
