| MMDBm0000583 | Saccharomyces cerevisiae | Fungi | Ascomycota | Human Feces | Unknown | YMDB |
| MMDBm0000055 | Bacteroides thetaiotaomicron VPI-5482 | Bacteria | Bacteroidetes | Human | Not Available | RHEA |
| MMDBm0570591 | Actinobacillus pleuropneumoniae | Bacteria | Proteobacteria | Human Feces | Not Available | RHEA |
| MMDBm0001231 | Aquifex aeolicus VF5 | Bacteria | Aquificae | Not Available | Not Available | RHEA |
| MMDBm0001034 | Bacillus amyloliquefaciens | Bacteria | Firmicutes | Human | Not Available | RHEA |
| MMDBm0001248 | Bacillus subtilis subsp. subtilis str. 168 | Bacteria | Firmicutes | Human Feces | Not Available | RHEA |
| MMDBm0001324 | Buchnera aphidicola str. Bp (Baizongia pistaciae) | Bacteria | Proteobacteria | Not Available | Not Available | RHEA |
| MMDBm0001423 | Chlamydia muridarum Nigg | Bacteria | Chlamydiae | Human | Not Available | RHEA |
| MMDBm0637965 | Chlamydia pneumoniae | Bacteria | Chlamydiae | Human | Not Available | RHEA |
| MMDBm0001422 | Chlamydia trachomatis D/UW-3/CX | Bacteria | Chlamydiae | Human | Not Available | RHEA |
| MMDBm0000516 | Corynebacterium ammoniagenes | Bacteria | Actinobacteria | Human | Not Available | RHEA |
| MMDBm0541555 | Escherichia coli K-12 | Bacteria | Proteobacteria | Not Available | Not Available | RHEA |
| MMDBm0001658 | Haemophilus influenzae Rd KW20 | Bacteria | Proteobacteria | Human | Not Available | RHEA |
| MMDBm0001882 | Mycobacterium tuberculosis CDC1551 | Bacteria | Actinobacteria | Human | Not Available | RHEA |
| MMDBm0001880 | Mycobacterium tuberculosis H37Rv | Bacteria | Actinobacteria | Human | Not Available | RHEA |
| MMDBm0882069 | Synechocystis sp. PCC 6803 substr. Kazusa | Bacteria | Not Available | Not Available | Not Available | RHEA |
| MMDBm0001322 | Buchnera aphidicola str. APS (Acyrthosiphon pisum) | Bacteria | Proteobacteria | Not Available | Not Available | RHEA |
| MMDBm0001323 | Buchnera aphidicola str. Sg (Schizaphis graminum) | Bacteria | Proteobacteria | Not Available | Not Available | RHEA |
