MiMeDB: Bacillus amyloliquefaciens (MMDBm0001034)

Microbe Identification

Microbe name

Bacillus amyloliquefaciens

NCBI Taxonomy ID

Microbe Taxonomy

Superkingdom

Bacteria

Kingdom

Eubacteria

Phylum

Firmicutes

Class

Bacilli

Order

Bacillales

Family

Bacillaceae

Genus

Bacillus

Species

amyloliquefaciens

Strain

Not Available

Microbe Properties

Gram staining properties

Positive

Shape

Bacilli

Mobility

Not Available

Flagellar presence

Not Available

Number of membranes

Not Available

Oxygen preference

Aerobe

Optimal temperature

Not Available

Temperature range

Not Available

Habitat

Not Available

Biotic relationship

Not Available

Cell arrangement

Not Available

Sporulation

Not Available

Metabolism

Not Available

Energy source

Not Available

Host and Biospecimens

Host	Body site	Biospecimen	Details	Data Source	Reference
Human	Large intestine			BacDive	34718743

Health Effects

Host	Related Health Condition	Biospecimen	Microbal response/effect	Data Source	Reference

Related Metabolites

Metabolic Reactions

Reactions

Reaction ID	Precursor	Product	Enzyme	Reaction Type	Data Source	Reference
MMDBr0013081	(6R)-5,10-methylene-5,6,7,8-tetrahydrofolic acid	7,8-dihydrofolate monoglutamate	Bifunctional dihydrofolate reductase-thymidylate synthase	Reduction; Synthesis	RHEA	34755880
MMDBr0013333	Adenosine triphosphate	ADP	Protein ARG5,6, mitochondrial	Phosphorylation	RHEA	34755880
MMDBr0013354	Adenosine triphosphate	pimeloyl-CoA	6-carboxyhexanoate--CoA ligase	Ligation	RHEA	34755880
MMDBr0013416	L-Glutamic acid	Ornithine	Arginine biosynthesis bifunctional protein ArgJ	Acetylation; Synthesis	RHEA	34755880
MMDBr0013692	5-Amino-6-(5-phospho-D-ribitylamino)uracil	5-amino-6-(5-phospho-D-ribosylamino)uracil	Riboflavin biosynthesis protein RibD	Reduction	RHEA	34755880
MMDBr0013717	alpha-Ketoglutarate	L-Glutamic acid	Acetylornithine aminotransferase	Amine group addition	RHEA	34755880
MMDBr0013771	D-Ribulose 5-phosphate	L-3,4-Dihydroxybutan-2-one 4-phosphate	3,4-dihydroxy-2-butanone 4-phosphate synthase	Synthesis	RHEA	34755880
MMDBr0014033	6,7-Dimethyl-8-(1-D-ribityl)lumazine	5-amino-6-(D-ribitylamino)uracil	Riboflavin synthase	Synthesis	RHEA	34755880
MMDBr0014117	N-Acetyl-L-glutamate 5-semialdehyde	Hydrogen Ion	Protein ARG5,6, mitochondrial	Reduction	RHEA	34755880
MMDBr0014436	Acetyl-CoA	CoA	Amino-acid acetyltransferase	Acetylation; Synthesis	RHEA	34755880
MMDBr0014619	L-3,4-Dihydroxybutan-2-one 4-phosphate	6,7-Dimethyl-8-(1-D-ribityl)lumazine	6,7-dimethyl-8-ribityllumazine synthase	Synthesis	RHEA	34755880
MMDBr0015230	Hydrogen Ion	3-[(4R)-4-Hydroxycyclohexa-1,5-dien-1-yl]-2-oxopropanoate	Prephenate decarboxylase	Decarboxylation	RHEA	34755880
MMDBr0015270	3-[(4R)-4-Hydroxycyclohexa-1,5-dien-1-yl]-2-oxopropanoate	3-[(1E,4R)-4-hydroxycyclohex-2-en-1-ylidene]pyruvic acid	H2HPP isomerase	Isomerization	RHEA	34755880
MMDBr0016072	Adenosine triphosphate	ADP	Alanine--anticapsin ligase	Ligation	RHEA	34755880
MMDBr0016094	L-Dihydroanticapsin	Hydrogen Ion	Dihydroanticapsin 7-dehydrogenase	Dehydrogenation	RHEA	34755880
MMDBr0024458	Sucrose	D-Glucose	Levansucrase	Not Available	RHEA	34755880
MMDBr0024545	S-Adenosylmethionine	Hydrogen Ion	Type II methyltransferase M.MwoI	Methylation	RHEA	34755880
MMDBr0024696	Water	Ammonium	Riboflavin biosynthesis protein RibD	Synthesis	RHEA	34755880
MMDBr0024707	di-mu-Sulfido-diiron(1+)	5'-Deoxyadenosine	Biotin synthase	Synthesis	RHEA	34755880
MMDBr0024750	Water	Hydrogen Ion	GTP cyclohydrolase-2	Hydrolysis of bond; Synthesis	RHEA	34755880

Genome Data

Genome Link

Genome Length

3984984 bp

# Predicted Proteins

4054

GenBank Sequence Modification Date

17-FEB-2022

MiMeDB Deposition Date

2022-08-28 03:48:06 UTC

Reference

Source Links

GenBank