| MMDBm0064156 | Fusarium graminearum PH-1 | Fungi | Ascomycota | Not Available | Not Available | RHEA |
| MMDBm0029017 | Aspergillus fischeri NRRL 181 | Fungi | Ascomycota | Not Available | Not Available | RHEA |
| MMDBm0000583 | Saccharomyces cerevisiae | Fungi | Ascomycota | Human Feces | Unknown | YMDB |
| MMDBm0098044 | Eremothecium gossypii ATCC 10895 | Fungi | Ascomycota | Not Available | Not Available | RHEA |
| MMDBm0101463 | Pneumocystis carinii | Fungi | Ascomycota | Not Available | Not Available | RHEA |
| MMDBm0098246 | [Candida] glabrata CBS 138 | Fungi | Ascomycota | Not Available | Not Available | RHEA |
| MMDBm0101577 | Schizosaccharomyces pombe 972h- | Fungi | Ascomycota | Not Available | Not Available | RHEA |
| MMDBm0095324 | Candida albicans SC5314 | Fungi | Ascomycota | Not Available | Not Available | RHEA |
| MMDBm0036372 | Nannizzia gypsea CBS 118893 | Fungi | Ascomycota | Not Available | Not Available | RHEA |
| MMDBm0098378 | Saccharomyces cerevisiae S288C | Fungi | Ascomycota | Not Available | Not Available | RHEA |
| MMDBm0138596 | Ganoderma lucidum | Fungi | Basidiomycota | Not Available | Not Available | RHEA |
| MMDBm0029023 | Aspergillus fumigatus A1163 | Fungi | Ascomycota | Not Available | Not Available | RHEA |
| MMDBm0029026 | Aspergillus fumigatus Af293 | Fungi | Ascomycota | Not Available | Not Available | RHEA |
| MMDBm0000012 | Agrobacterium tumefaciens F2 | Bacteria | Proteobacteria | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0483496 | Burkholderia cepacia GG4 | Bacteria | Proteobacteria | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0580586 | Pseudomonas monteilii QM | Bacteria | Proteobacteria | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0002190 | Vibrio furnissii NCTC 11218 | Bacteria | Proteobacteria | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0461764 | Roseomonas mucosa ATCC BAA-692 | Bacteria | Proteobacteria | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0000194 | Klebsiella aerogenes KCTC 2190 | Bacteria | Proteobacteria | Human | Metabolic reconstruction | VMH |
| MMDBm0482767 | Bordetella hinzii OH87 BAL007II | Bacteria | Proteobacteria | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0670510 | Microbacterium gubbeenense DSM 15944 | Bacteria | Actinobacteria | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0802901 | [Clostridium] symbiosum ATCC 14940 | Bacteria | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0766846 | Aneurinibacillus aneurinilyticus ATCC 12856 | Bacteria | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0609478 | Grimontia hollisae CIP 101886 | Bacteria | Proteobacteria | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0572828 | Acinetobacter johnsonii SH046 | Bacteria | Proteobacteria | Human Feces | Metabolic reconstruction | VMH |
