| MMDBm0002710 | Thermotoga petrophila RKU-1 | Bacteria | Thermotogae | Not Available | Not Available | RHEA |
| MMDBm0002711 | Thermotoga lettingae TMO | Bacteria | Thermotogae | Not Available | Not Available | RHEA |
| MMDBm0001963 | Thermotoga maritima MSB8 | Bacteria | Thermotogae | Not Available | Not Available | RHEA |
| MMDBm0002701 | Thermoplasma acidophilum DSM 1728 | Archaea | Euryarchaeota | Not Available | Not Available | RHEA |
| MMDBm0002702 | Thermoplasma volcanium GSS1 | Archaea | Euryarchaeota | Not Available | Not Available | RHEA |
| MMDBm0881918 | Candidatus Nitrososphaera gargensis Ga9.2 | Archaea | Thaumarchaeota | Not Available | Metabolic reconstruction | VMH |
| MMDBm0001818 | Methanocaldococcus jannaschii DSM 2661 | Archaea | Euryarchaeota | Not Available | Not Available | RHEA |
| MMDBm0001846 | Methanosphaera stadtmanae DSM 3091 | Archaea | Euryarchaeota | Not Available | Metabolic reconstruction | VMH |
| MMDBm0001849 | Methanothermobacter thermautotrophicus str. Delta H | Archaea | Euryarchaeota | Not Available | Not Available | RHEA |
| MMDBm0000218 | Methanobrevibacter smithii ATCC 35061 | Archaea | Euryarchaeota | Not Available | Metabolic reconstruction | VMH |
| MMDBm0881919 | Halococcus morrhuae DSM 1307 | Archaea | Euryarchaeota | Not Available | Metabolic reconstruction | VMH |
| MMDBm0001652 | Gloeobacter violaceus PCC 7421 | Bacteria | Cyanobacteria | Not Available | Not Available | RHEA |
| MMDBm0001524 | Deinococcus radiodurans R1 | Bacteria | Deinococcus-thermus | Not Available | Not Available | RHEA |
| MMDBm0001983 | Thermus thermophilus HB27 | Bacteria | Deinococcus-thermus | Not Available | Not Available | RHEA |
| MMDBm0001985 | Thermus thermophilus HB8 | Bacteria | Deinococcus-thermus | Not Available | Not Available | RHEA |
| MMDBm0001526 | Deinococcus deserti VCD115 | Bacteria | Deinococcus-thermus | Not Available | Not Available | RHEA |
| MMDBm0001525 | Deinococcus geothermalis DSM 11300 | Bacteria | Deinococcus-thermus | Not Available | Not Available | RHEA |
| MMDBm0002553 | Spirosoma linguale DSM 74 | Bacteria | Bacteroidetes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0397638 | Dyadobacter beijingensis DSM 21582 | Bacteria | Bacteroidetes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0001564 | Dyadobacter fermentans DSM 18053 | Bacteria | Bacteroidetes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0397948 | Rudanella lutea DSM 19387 | Bacteria | Bacteroidetes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0001358 | Thermoanaerobacter tengcongensis MB4 | Bacteria | Firmicutes | Not Available | Not Available | RHEA |
| MMDBm0001458 | Clostridium kluyveri DSM 555 | Bacteria | Firmicutes | Not Available | Not Available | RHEA |
| MMDBm0001469 | Clostridium botulinum Ba4 str. 657 | Bacteria | Firmicutes | Human | Not Available | RHEA |
| MMDBm0001462 | Clostridium botulinum B1 str. Okra | Bacteria | Firmicutes | Human | Not Available | RHEA |
