MiMeDB: Showing metabocard for 2-phenylacetic acid (MMDBc0054188)

Record Information

Version

1.0

Status

Detected and Quantified

Creation Date

2022-06-05 22:57:59 UTC

Update Date

2022-09-01 02:27:45 UTC

Metabolite ID

MMDBc0054188

Metabolite Identification

Common Name

2-phenylacetic acid

Description

phenylacetate, also known as 2-phenylethanoate or phenylacetic acid, belongs to the class of organic compounds known as benzene and substituted derivatives. These are aromatic compounds containing one monocyclic ring system consisting of benzene. phenylacetate is a weakly acidic compound (based on its pKa). A monocarboxylic acid anion that is the conjugate base of phenylacetic acid.

Structure

MOL SDF PDB SMILES InChI

Synonyms

Value	Source
2-Phenylacetate	ChEBI
2-Phenylethanoate	ChEBI
Phenylacetate anion	ChEBI
Phenylacetate(1-)	ChEBI
Phenylacetic acid anion	ChEBI
2-Phenylacetic acid	Generator
2-Phenylethanoic acid	Generator
Phenylacetic acid(1-)	Generator
Phenylacetic acid	Generator

Molecular Formula

C₈H₇O₂

Average Mass

135.143

Monoisotopic Mass

135.045153045

IUPAC Name

2-phenylacetate

Traditional Name

phenylacetate

CAS Registry Number

Not Available

SMILES

[O-]C(=O)CC1=CC=CC=C1

InChI Identifier

InChI=1S/C8H8O2/c9-8(10)6-7-4-2-1-3-5-7/h1-5H,6H2,(H,9,10)/p-1

InChI Key

WLJVXDMOQOGPHL-UHFFFAOYSA-M

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as benzene and substituted derivatives. These are aromatic compounds containing one monocyclic ring system consisting of benzene.

Kingdom

Organic compounds

Super Class

Benzenoids

Class

Benzene and substituted derivatives

Sub Class

Not Available

Direct Parent

Benzene and substituted derivatives

Alternative Parents

Substituents

Monocyclic benzene moiety
Monocarboxylic acid or derivatives
Carboxylic acid
Carboxylic acid derivative
Organic oxygen compound
Organic oxide
Hydrocarbon derivative
Organooxygen compound
Carbonyl group
Organic anion
Aromatic homomonocyclic compound

Molecular Framework

Aromatic homomonocyclic compounds

External Descriptors

monocarboxylic acid anion (CHEBI:18401 )
a phenyl acetate (PHENYLACETATE )

Functional Ontology

Not Available

Physical Properties

State

Expected Solid

Predicted Properties

Property	Value	Source
Water Solubility	6.64 g/L	ALOGPS
logP	1.53	ALOGPS
logP	1.61	ChemAxon
logS	-1.4	ALOGPS
pKa (Strongest Acidic)	4.55	ChemAxon
Physiological Charge	-1	ChemAxon
Hydrogen Acceptor Count	2	ChemAxon
Hydrogen Donor Count	0	ChemAxon
Polar Surface Area	40.13 Å²	ChemAxon
Rotatable Bond Count	2	ChemAxon
Refractivity	48.2 m³·mol⁻¹	ChemAxon
Polarizability	13.43 Å³	ChemAxon
Number of Rings	1	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

Spectra

Spectrum Type	Description	Splash Key	Deposition Date	View
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 10V, Negative	splash10-000f-9700000000-5a51799544e08ed29e0a	2018-04-06	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 20V, Negative	splash10-000f-8900000000-f9a6714d5a7807d5df89	2018-04-06	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 40V, Negative	splash10-0006-9100000000-8a4723478ae41a8f0c4d	2018-04-06	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 100 MHz, H₂O, predicted)		2022-08-21	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)		2022-08-21	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 1000 MHz, H₂O, predicted)		2022-08-21	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)		2022-08-21	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 200 MHz, H₂O, predicted)		2022-08-21	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)		2022-08-21	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 300 MHz, H₂O, predicted)		2022-08-21	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)		2022-08-21	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 400 MHz, H₂O, predicted)		2022-08-21	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)		2022-08-21	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 500 MHz, H₂O, predicted)		2022-08-21	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)		2022-08-21	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 600 MHz, H₂O, predicted)		2022-08-21	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)		2022-08-21	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 700 MHz, H₂O, predicted)		2022-08-21	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)		2022-08-21	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 800 MHz, H₂O, predicted)		2022-08-21	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)		2022-08-21	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 900 MHz, H₂O, predicted)		2022-08-21	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)		2022-08-21	View Spectrum

Biological Properties

Cellular Locations

Not Available

Biospecimen Locations

Not Available

Tissue Locations

Not Available

Associated OMIM IDs

114500 (Colorectal cancer)
610247 (Eosinophilic esophagitis)

Human Proteins and Enzymes

Protein ID	Protein Name	Protein Type	Uniprot ID	Species

Human Pathways

Pathways

Name	SMPDB/PathBank

Metabolic Reactions

Reaction ID	Precursor	Product	Enzyme	Reaction Type	Data Source	Reference
MMDBr0014055	2-phenylacetic acid	Adenosine monophosphate	Phenylacetate-coenzyme A ligase	Ligation	RHEA	34755880
MMDBr0014056	2-phenylacetic acid	Adenosine monophosphate	Phenylacetate-coenzyme A ligase	Ligation	RHEA	34755880
MMDBr0014098	Phenylacetaldehyde	2-phenylacetic acid	Phenylacetaldehyde dehydrogenase	Dehydrogenation	RHEA	34755880
MMDBr0016654	2-phenylacetic acid	(2-hydroxyphenyl)acetic acid	Phenylacetate 2-hydroxylase	Hydroxylation	RHEA	34755880
MMDBr0038751	Phenylacetyl-CoA	2-phenylacetic acid	Thioesterase TesA	Hydrolysis	RHEA	34755880

Health Effects and Bioactivity

Health Outcome/Bioactivity	Metabolite Response/Effect	Evidence Type	Host and Biospecimen	Data Source	Reference

Microbial Sources

Superkingdom/Kingdom	Phylum	Total species	Hosts and Body Sites
Bacteria	Proteobacteria	4	Human ; Human subgingival plaque
Bacteria	Deinococcus-thermus	1
Eukaryota/Fungi	Ascomycota	1	Human feces

Exposure Sources

Source Type	Source Sub-type	Species	Data Source	Reference

Host Biospecimen and Location

Host and Biospecimen	Status	Mean	Std	Min	Max	Units	Age	Sex	Health Condition	Data Source	Reference

External Links

HMDB ID

HMDB0183895

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FooDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

PHENYLACETATE

BiGG ID

Not Available

Wikipedia Link

Phenylacetate

METLIN ID

Not Available

PubChem Compound

4409936

PDB ID

Not Available

ChEBI ID

18401

Food Biomarker Ontology

Not Available

References

Synthesis Reference

Not Available

General References

Bansal P, Morgat A, Axelsen KB, Muthukrishnan V, Coudert E, Aimo L, Hyka-Nouspikel N, Gasteiger E, Kerhornou A, Neto TB, Pozzato M, Blatter MC, Ignatchenko A, Redaschi N, Bridge A: Rhea, the reaction knowledgebase in 2022. Nucleic Acids Res. 2022 Jan 7;50(D1):D693-D700. doi: 10.1093/nar/gkab1016. [PubMed:34755880 ]

Showing metabocard for 2-phenylacetic acid (MMDBc0054188)

MOL for #<Metabolite:0x000055d24a345f40>

3D MOL for #<Metabolite:0x000055d24a345f40>

3D SDF for #<Metabolite:0x000055d24a345f40>

3D-SDF for #<Metabolite:0x000055d24a345f40>

PDB for #<Metabolite:0x000055d24a345f40>

3D PDB for #<Metabolite:0x000055d24a345f40>

SMILES for #<Metabolite:0x000055d24a345f40>

INCHI for #<Metabolite:0x000055d24a345f40>

Structure for #<Metabolite:0x000055d24a345f40>

3D Structure for #<Metabolite:0x000055d24a345f40>