MiMeDB: Showing metabocard for 7alpha,12alpha-dihydroxy-3-oxochol-24-oyl-CoA (MMDBc0055640)

Record Information

Version

1.0

Status

Detected and Quantified

Creation Date

2022-06-17 20:01:03 UTC

Update Date

2022-08-12 20:09:26 UTC

Metabolite ID

MMDBc0055640

Metabolite Identification

Common Name

7alpha,12alpha-dihydroxy-3-oxochol-24-oyl-CoA

Description

7alpha,12alpha-dihydroxy-3-oxochol-24-oyl-CoA, also known as 3-dehydrocholyl-CoA(4-), belongs to the class of organic compounds known as 2,3,4-saturated fatty acyl coas. These are acyl-CoAs carrying a 2,3,4-saturated fatty acyl chain. Based on a literature review very few articles have been published on 7alpha,12alpha-dihydroxy-3-oxochol-24-oyl-CoA.

Structure

MOL SDF PDB SMILES InChI


  Mrv1652306172222012D          

 89 95  0  0  1  0            999 V2000
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  8  7  1  0  0  0  0
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M  CHG  4  56  -1  60  -1  61  -1  62  -1
M  END


  Mrv1652306172222012D          

 89 95  0  0  1  0            999 V2000
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  -10.5192    5.5457    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  -10.2681    3.5406    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -8.7397    4.1623    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  -11.4493    4.8413    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -9.1930    3.0873    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  -13.1491    5.1235    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  -12.6066    7.1882    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -9.8148    4.6156    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  -11.7837    7.2478    0.0000 P   0  0  0  0  0  0  0  0  0  0  0  0
  -10.6320    4.7285    0.0000 P   0  0  0  0  0  0  0  0  0  0  0  0
   -9.5039    3.8515    0.0000 P   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2287   -0.7594    0.0000 S   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0879   -0.3338    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.6540    2.0084    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.1146    1.1244    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.2274    2.5190    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.5615    1.0873    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.4024    3.4151    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
  -12.1058    6.3953    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.8131   -0.3193    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.2111    1.3314    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
  -13.5393    7.0902    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
  -13.3263    5.7035    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.2476    2.0974    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
  -14.5684    5.9550    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
  8  7  1  0  0  0  0
  9  6  1  0  0  0  0
 12 10  1  0  0  0  0
 13 11  1  0  0  0  0
 15 14  1  0  0  0  0
 23  1  1  6  0  0  0
 23  6  1  0  0  0  0
 24 16  1  0  0  0  0
 24 17  1  0  0  0  0
 25 10  1  0  0  0  0
 25 16  1  0  0  0  0
 26  7  1  0  0  0  0
 26 23  1  1  0  0  0
 27  8  1  0  0  0  0
 28 18  1  0  0  0  0
 29 17  1  0  0  0  0
 30 19  1  1  0  0  0
 31 18  1  0  0  0  0
 32 11  1  0  0  0  0
 33  9  1  0  0  0  0
 34 27  1  0  0  0  0
 34 28  1  0  0  0  0
 34 29  1  0  0  0  0
 37 30  1  0  0  0  0
 37 36  1  0  0  0  0
 39 35  2  0  0  0  0
 40 35  1  0  0  0  0
 41 38  1  0  0  0  0
 42 36  1  0  0  0  0
 43  2  1  0  0  0  0
 43  3  1  0  0  0  0
 43 20  1  0  0  0  0
 43 38  1  0  0  0  0
 44  4  1  1  0  0  0
 44 12  1  0  0  0  0
 44 24  1  0  0  0  0
 44 28  1  0  0  0  0
 45  5  1  1  0  0  0
 45 26  1  0  0  0  0
 45 27  1  0  0  0  0
 45 31  1  0  0  0  0
 46 39  1  0  0  0  0
 47 14  1  4  0  0  0
 47 32  2  0  0  0  0
 48 13  1  4  0  0  0
 48 41  2  0  0  0  0
 49 21  2  0  0  0  0
 49 39  1  0  0  0  0
 50 21  1  0  0  0  0
 50 40  2  0  0  0  0
 51 22  2  0  0  0  0
 51 35  1  0  0  0  0
 52 22  1  0  0  0  0
 52 40  1  0  0  0  0
 42 52  1  1  0  0  0
 53 25  2  0  0  0  0
 29 54  1  6  0  0  0
 31 55  1  6  0  0  0
 56 32  1  0  0  0  0
 57 33  2  0  0  0  0
 36 58  1  6  0  0  0
 38 59  1  1  0  0  0
 60 41  1  0  0  0  0
 68 19  1  0  0  0  0
 69 20  1  0  0  0  0
 70 30  1  0  0  0  0
 70 42  1  0  0  0  0
 37 71  1  1  0  0  0
 73 61  1  0  0  0  0
 73 62  1  0  0  0  0
 73 63  2  0  0  0  0
 73 71  1  0  0  0  0
 74 64  1  0  0  0  0
 74 65  2  0  0  0  0
 74 68  1  0  0  0  0
 74 72  1  0  0  0  0
 75 66  1  0  0  0  0
 75 67  2  0  0  0  0
 75 69  1  0  0  0  0
 75 72  1  0  0  0  0
 76 15  1  0  0  0  0
 76 33  1  0  0  0  0
 23 77  1  1  0  0  0
 24 78  1  1  0  0  0
 26 79  1  6  0  0  0
 27 80  1  6  0  0  0
 28 81  1  6  0  0  0
 29 82  1  1  0  0  0
 30 83  1  6  0  0  0
 31 84  1  1  0  0  0
 34 85  1  1  0  0  0
 36 86  1  1  0  0  0
 37 87  1  1  0  0  0
 38 88  1  1  0  0  0
 42 89  1  6  0  0  0
M  CHG  4  56  -1  60  -1  61  -1  62  -1
M  END
> <DATABASE_ID>
MMDBc0055640

> <DATABASE_NAME>
MIME

> <SMILES>
[H][C@@](C)(CCC(=O)SCCN=C([O-])CCN=C([O-])[C@]([H])(O)C(C)(C)COP(O)(=O)OP(O)(=O)OC[C@@]1([H])O[C@@]([H])(N2C=NC3=C(N)N=CN=C23)[C@]([H])(O)[C@]1([H])OP([O-])([O-])=O)[C@@]1([H])CC[C@@]2([H])[C@]3([H])[C@]([H])(O)C[C@]4([H])CC(=O)CC[C@]4(C)[C@@]3([H])C[C@]([H])(O)[C@]12C

> <INCHI_IDENTIFIER>
InChI=1S/C45H72N7O20P3S/c1-23(26-7-8-27-34-28(18-31(55)45(26,27)5)44(4)12-10-25(53)16-24(44)17-29(34)54)6-9-33(57)76-15-14-47-32(56)11-13-48-41(60)38(59)43(2,3)20-69-75(66,67)72-74(64,65)68-19-30-37(71-73(61,62)63)36(58)42(70-30)52-22-51-35-39(46)49-21-50-40(35)52/h21-24,26-31,34,36-38,42,54-55,58-59H,6-20H2,1-5H3,(H,47,56)(H,48,60)(H,64,65)(H,66,67)(H2,46,49,50)(H2,61,62,63)/p-4/t23-,24+,26-,27+,28+,29-,30-,31+,34+,36-,37-,38+,42-,44+,45-/m1/s1

> <INCHI_KEY>
DABYNUYNLLSQQV-QROUSYAVSA-J

> <FORMULA>
C45H68N7O20P3S

> <MOLECULAR_WEIGHT>
1152.05

> <EXACT_MASS>
1151.347464105

> <JCHEM_ACCEPTOR_COUNT>
22

> <JCHEM_ATOM_COUNT>
144

> <JCHEM_AVERAGE_POLARIZABILITY>
111.90951237705424

> <JCHEM_BIOAVAILABILITY>
0

> <JCHEM_DONOR_COUNT>
7

> <JCHEM_FORMAL_CHARGE>
-4

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
(2R)-4-({[({[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-4-hydroxy-3-(phosphonooxy)oxolan-2-yl]methoxy}(hydroxy)phosphoryl)oxy](hydroxy)phosphoryl}oxy)-N-{2-[(2-{[(4R)-4-[(1S,2S,7R,9R,10R,11S,14R,15R,16S)-9,16-dihydroxy-2,15-dimethyl-5-oxotetracyclo[8.7.0.0^{2,7}.0^{11,15}]heptadecan-14-yl]pentanoyl]sulfanyl}ethyl)-C-hydroxycarbonimidoyl]ethyl}-2-hydroxy-3,3-dimethylbutanecarboximidate

> <JCHEM_LOGP>
-1.3323300527465922

> <JCHEM_MDDR_LIKE_RULE>
1

> <JCHEM_NUMBER_OF_RINGS>
7

> <JCHEM_PHYSIOLOGICAL_CHARGE>
-4

> <JCHEM_PKA>
1.8916867134426782

> <JCHEM_PKA_STRONGEST_ACIDIC>
0.8201996995015262

> <JCHEM_PKA_STRONGEST_BASIC>
4.1599443424318565

> <JCHEM_POLAR_SURFACE_AREA>
439.46000000000004

> <JCHEM_REFRACTIVITY>
289.2260999999999

> <JCHEM_ROTATABLE_BOND_COUNT>
24

> <JCHEM_RULE_OF_FIVE>
0

> <JCHEM_TRADITIONAL_IUPAC>
(2R)-4-[({[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-4-hydroxy-3-(phosphonooxy)oxolan-2-yl]methoxy(hydroxy)phosphoryl}oxy(hydroxy)phosphoryl)oxy]-N-{2-[(2-{[(4R)-4-[(1S,2S,7R,9R,10R,11S,14R,15R,16S)-9,16-dihydroxy-2,15-dimethyl-5-oxotetracyclo[8.7.0.0^{2,7}.0^{11,15}]heptadecan-14-yl]pentanoyl]sulfanyl}ethyl)-C-hydroxycarbonimidoyl]ethyl}-2-hydroxy-3,3-dimethylbutanecarboximidate

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 17-JUN-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   17-JUN-22         0                                  
HETATM    1  C   UNK     0       1.362  -0.834   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0     -16.481   3.545   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0     -13.628   4.706   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       7.290   1.123   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       2.594   0.373   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0      -0.744   0.803   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       1.298   3.288   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0       2.573   4.152   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0      -1.690  -0.412   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0      10.322   1.666   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0     -10.262  -0.575   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       8.806   1.394   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0     -10.843   0.852   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0      -6.631  -2.423   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0      -5.686  -1.207   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0       9.853   4.291   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0       7.344   5.197   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0       5.774   0.852   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0     -21.952  10.464   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0     -15.635   5.552   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0     -30.598  12.029   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0     -27.499   7.984   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0       0.781   0.593   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0       8.337   4.020   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0      10.845   3.114   0.000  0.00  0.00           C+0
HETATM   26  C   UNK     0       1.726   1.809   0.000  0.00  0.00           C+0
HETATM   27  C   UNK     0       3.789   3.207   0.000  0.00  0.00           C+0
HETATM   28  C   UNK     0       6.297   2.301   0.000  0.00  0.00           C+0
HETATM   29  C   UNK     0       5.828   4.926   0.000  0.00  0.00           C+0
HETATM   30  C   UNK     0     -23.478  10.674   0.000  0.00  0.00           C+0
HETATM   31  C   UNK     0       4.258   0.581   0.000  0.00  0.00           C+0
HETATM   32  C   UNK     0      -8.737  -0.786   0.000  0.00  0.00           C+0
HETATM   33  C   UNK     0      -3.215  -0.202   0.000  0.00  0.00           C+0
HETATM   34  C   UNK     0       5.305   3.478   0.000  0.00  0.00           C+0
HETATM   35  C   UNK     0     -29.742   9.071   0.000  0.00  0.00           C+0
HETATM   36  C   UNK     0     -25.720  11.761   0.000  0.00  0.00           C+0
HETATM   37  C   UNK     0     -24.204  12.032   0.000  0.00  0.00           C+0
HETATM   38  C   UNK     0     -14.474   2.699   0.000  0.00  0.00           C+0
HETATM   39  C   UNK     0     -31.237   9.440   0.000  0.00  0.00           C+0
HETATM   40  C   UNK     0     -28.674  10.181   0.000  0.00  0.00           C+0
HETATM   41  C   UNK     0     -12.949   2.489   0.000  0.00  0.00           C+0
HETATM   42  C   UNK     0     -25.931  10.236   0.000  0.00  0.00           C+0
HETATM   43  C   UNK     0     -15.054   4.126   0.000  0.00  0.00           C+0
HETATM   44  C   UNK     0       7.813   2.572   0.000  0.00  0.00           C+0
HETATM   45  C   UNK     0       3.266   1.759   0.000  0.00  0.00           C+0
HETATM   46  N   UNK     0     -32.304   8.329   0.000  0.00  0.00           N+0
HETATM   47  N   UNK     0      -8.156  -2.212   0.000  0.00  0.00           N+0
HETATM   48  N   UNK     0     -12.368   1.062   0.000  0.00  0.00           N+0
HETATM   49  N   UNK     0     -31.665  10.919   0.000  0.00  0.00           N+0
HETATM   50  N   UNK     0     -29.102  11.661   0.000  0.00  0.00           N+0
HETATM   51  N   UNK     0     -29.015   7.713   0.000  0.00  0.00           N+0
HETATM   52  N   UNK     0     -27.289   9.509   0.000  0.00  0.00           N+0
HETATM   53  O   UNK     0      12.361   3.385   0.000  0.00  0.00           O+0
HETATM   54  O   UNK     0       4.835   6.104   0.000  0.00  0.00           O+0
HETATM   55  O   UNK     0       3.735  -0.867   0.000  0.00  0.00           O+0
HETATM   56  O   UNK     0      -7.792   0.430   0.000  0.00  0.00           O-1
HETATM   57  O   UNK     0      -3.795   1.225   0.000  0.00  0.00           O+0
HETATM   58  O   UNK     0     -26.830  12.828   0.000  0.00  0.00           O+0
HETATM   59  O   UNK     0     -15.419   1.484   0.000  0.00  0.00           O+0
HETATM   60  O   UNK     0     -12.003   3.704   0.000  0.00  0.00           O-1
HETATM   61  O   UNK     0     -21.885  11.993   0.000  0.00  0.00           O-1
HETATM   62  O   UNK     0     -22.107  15.065   0.000  0.00  0.00           O-1
HETATM   63  O   UNK     0     -20.460  13.640   0.000  0.00  0.00           O+0
HETATM   64  O   UNK     0     -20.057   7.301   0.000  0.00  0.00           O+0
HETATM   65  O   UNK     0     -19.636  10.352   0.000  0.00  0.00           O+0
HETATM   66  O   UNK     0     -19.167   6.609   0.000  0.00  0.00           O+0
HETATM   67  O   UNK     0     -16.314   7.770   0.000  0.00  0.00           O+0
HETATM   68  O   UNK     0     -21.372   9.037   0.000  0.00  0.00           O+0
HETATM   69  O   UNK     0     -17.160   5.763   0.000  0.00  0.00           O+0
HETATM   70  O   UNK     0     -24.545   9.564   0.000  0.00  0.00           O+0
HETATM   71  O   UNK     0     -23.532  13.418   0.000  0.00  0.00           O+0
HETATM   72  O   UNK     0     -18.321   8.616   0.000  0.00  0.00           O+0
HETATM   73  P   UNK     0     -21.996  13.529   0.000  0.00  0.00           P+0
HETATM   74  P   UNK     0     -19.846   8.827   0.000  0.00  0.00           P+0
HETATM   75  P   UNK     0     -17.741   7.189   0.000  0.00  0.00           P+0
HETATM   76  S   UNK     0      -4.160  -1.418   0.000  0.00  0.00           S+0
HETATM   77  H   UNK     0      -0.164  -0.623   0.000  0.00  0.00           H+0
HETATM   78  H   UNK     0       6.821   3.749   0.000  0.00  0.00           H+0
HETATM   79  H   UNK     0       0.214   2.099   0.000  0.00  0.00           H+0
HETATM   80  H   UNK     0       4.158   4.702   0.000  0.00  0.00           H+0
HETATM   81  H   UNK     0       4.782   2.030   0.000  0.00  0.00           H+0
HETATM   82  H   UNK     0       6.351   6.375   0.000  0.00  0.00           H+0
HETATM   83  H   UNK     0     -22.598  11.938   0.000  0.00  0.00           H+0
HETATM   84  H   UNK     0       5.251  -0.596   0.000  0.00  0.00           H+0
HETATM   85  H   UNK     0       4.127   2.485   0.000  0.00  0.00           H+0
HETATM   86  H   UNK     0     -25.273  13.235   0.000  0.00  0.00           H+0
HETATM   87  H   UNK     0     -24.876  10.647   0.000  0.00  0.00           H+0
HETATM   88  H   UNK     0     -13.529   3.915   0.000  0.00  0.00           H+0
HETATM   89  H   UNK     0     -27.194  11.116   0.000  0.00  0.00           H+0
CONECT    1   23                                                            
CONECT    2   43                                                            
CONECT    3   43                                                            
CONECT    4   44                                                            
CONECT    5   45                                                            
CONECT    6    9   23                                                       
CONECT    7    8   26                                                       
CONECT    8    7   27                                                       
CONECT    9    6   33                                                       
CONECT   10   12   25                                                       
CONECT   11   13   32                                                       
CONECT   12   10   44                                                       
CONECT   13   11   48                                                       
CONECT   14   15   47                                                       
CONECT   15   14   76                                                       
CONECT   16   24   25                                                       
CONECT   17   24   29                                                       
CONECT   18   28   31                                                       
CONECT   19   30   68                                                       
CONECT   20   43   69                                                       
CONECT   21   49   50                                                       
CONECT   22   51   52                                                       
CONECT   23    1    6   26   77                                             
CONECT   24   16   17   44   78                                             
CONECT   25   10   16   53                                                  
CONECT   26    7   23   45   79                                             
CONECT   27    8   34   45   80                                             
CONECT   28   18   34   44   81                                             
CONECT   29   17   34   54   82                                             
CONECT   30   19   37   70   83                                             
CONECT   31   18   45   55   84                                             
CONECT   32   11   47   56                                                  
CONECT   33    9   57   76                                                  
CONECT   34   27   28   29   85                                             
CONECT   35   39   40   51                                                  
CONECT   36   37   42   58   86                                             
CONECT   37   30   36   71   87                                             
CONECT   38   41   43   59   88                                             
CONECT   39   35   46   49                                                  
CONECT   40   35   50   52                                                  
CONECT   41   38   48   60                                                  
CONECT   42   36   52   70   89                                             
CONECT   43    2    3   20   38                                             
CONECT   44    4   12   24   28                                             
CONECT   45    5   26   27   31                                             
CONECT   46   39                                                            
CONECT   47   14   32                                                       
CONECT   48   13   41                                                       
CONECT   49   21   39                                                       
CONECT   50   21   40                                                       
CONECT   51   22   35                                                       
CONECT   52   22   40   42                                                  
CONECT   53   25                                                            
CONECT   54   29                                                            
CONECT   55   31                                                            
CONECT   56   32                                                            
CONECT   57   33                                                            
CONECT   58   36                                                            
CONECT   59   38                                                            
CONECT   60   41                                                            
CONECT   61   73                                                            
CONECT   62   73                                                            
CONECT   63   73                                                            
CONECT   64   74                                                            
CONECT   65   74                                                            
CONECT   66   75                                                            
CONECT   67   75                                                            
CONECT   68   19   74                                                       
CONECT   69   20   75                                                       
CONECT   70   30   42                                                       
CONECT   71   37   73                                                       
CONECT   72   74   75                                                       
CONECT   73   61   62   63   71                                             
CONECT   74   64   65   68   72                                             
CONECT   75   66   67   69   72                                             
CONECT   76   15   33                                                       
CONECT   77   23                                                            
CONECT   78   24                                                            
CONECT   79   26                                                            
CONECT   80   27                                                            
CONECT   81   28                                                            
CONECT   82   29                                                            
CONECT   83   30                                                            
CONECT   84   31                                                            
CONECT   85   34                                                            
CONECT   86   36                                                            
CONECT   87   37                                                            
CONECT   88   38                                                            
CONECT   89   42                                                            
MASTER        0    0    0    0    0    0    0    0   89    0  190    0
END

Synonyms

Value	Source
3-Dehydrocholyl-CoA(4-)	ChEBI
3-oxo-Cholyl-CoA(4-)	ChEBI
7a,12a-Dihydroxy-3-oxochol-24-oyl-CoA	Generator
7Α,12α-dihydroxy-3-oxochol-24-oyl-CoA	Generator

Molecular Formula

C₄₅H₆₈N₇O₂₀P₃S

Average Mass

1152.05

Monoisotopic Mass

1151.347464105

IUPAC Name

(2R)-4-({[({[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-4-hydroxy-3-(phosphonooxy)oxolan-2-yl]methoxy}(hydroxy)phosphoryl)oxy](hydroxy)phosphoryl}oxy)-N-{2-[(2-{[(4R)-4-[(1S,2S,7R,9R,10R,11S,14R,15R,16S)-9,16-dihydroxy-2,15-dimethyl-5-oxotetracyclo[8.7.0.0^{2,7}.0^{11,15}]heptadecan-14-yl]pentanoyl]sulfanyl}ethyl)-C-hydroxycarbonimidoyl]ethyl}-2-hydroxy-3,3-dimethylbutanecarboximidate

Traditional Name

(2R)-4-[({[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-4-hydroxy-3-(phosphonooxy)oxolan-2-yl]methoxy(hydroxy)phosphoryl}oxy(hydroxy)phosphoryl)oxy]-N-{2-[(2-{[(4R)-4-[(1S,2S,7R,9R,10R,11S,14R,15R,16S)-9,16-dihydroxy-2,15-dimethyl-5-oxotetracyclo[8.7.0.0^{2,7}.0^{11,15}]heptadecan-14-yl]pentanoyl]sulfanyl}ethyl)-C-hydroxycarbonimidoyl]ethyl}-2-hydroxy-3,3-dimethylbutanecarboximidate

CAS Registry Number

Not Available

SMILES

[H][C@@](C)(CCC(=O)SCCN=C([O-])CCN=C([O-])[C@]([H])(O)C(C)(C)COP(O)(=O)OP(O)(=O)OC[C@@]1([H])O[C@@]([H])(N2C=NC3=C(N)N=CN=C23)[C@]([H])(O)[C@]1([H])OP([O-])([O-])=O)[C@@]1([H])CC[C@@]2([H])[C@]3([H])[C@]([H])(O)C[C@]4([H])CC(=O)CC[C@]4(C)[C@@]3([H])C[C@]([H])(O)[C@]12C

InChI Identifier

InChI=1S/C45H72N7O20P3S/c1-23(26-7-8-27-34-28(18-31(55)45(26,27)5)44(4)12-10-25(53)16-24(44)17-29(34)54)6-9-33(57)76-15-14-47-32(56)11-13-48-41(60)38(59)43(2,3)20-69-75(66,67)72-74(64,65)68-19-30-37(71-73(61,62)63)36(58)42(70-30)52-22-51-35-39(46)49-21-50-40(35)52/h21-24,26-31,34,36-38,42,54-55,58-59H,6-20H2,1-5H3,(H,47,56)(H,48,60)(H,64,65)(H,66,67)(H2,46,49,50)(H2,61,62,63)/p-4/t23-,24+,26-,27+,28+,29-,30-,31+,34+,36-,37-,38+,42-,44+,45-/m1/s1

InChI Key

DABYNUYNLLSQQV-QROUSYAVSA-J

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as 2,3,4-saturated fatty acyl coas. These are acyl-CoAs carrying a 2,3,4-saturated fatty acyl chain.

Kingdom

Organic compounds

Super Class

Lipids and lipid-like molecules

Class

Fatty Acyls

Sub Class

Fatty acyl thioesters

Direct Parent

2,3,4-saturated fatty acyl CoAs

Alternative Parents

Substituents

Coenzyme a or derivatives
Steroidal glycoside
Purine ribonucleoside diphosphate
Purine ribonucleoside bisphosphate
Purine ribonucleoside 3',5'-bisphosphate
Dihydroxy bile acid, alcohol, or derivatives
Cholane-skeleton
Hydroxy bile acid, alcohol, or derivatives
Bile acid, alcohol, or derivatives
3-oxo-5-beta-steroid
7-hydroxysteroid
Oxosteroid
Hydroxysteroid
12-hydroxysteroid
3-oxosteroid
Steroid
Ribonucleoside 3'-phosphate
Pentose-5-phosphate
Pentose phosphate
N-glycosyl compound
Glycosyl compound
Organic pyrophosphate
Monosaccharide phosphate
6-aminopurine
Purine
Imidazopyrimidine
Monoalkyl phosphate
Aminopyrimidine
Imidolactam
Alkyl phosphate
Pyrimidine
Phosphoric acid ester
Organic phosphoric acid derivative
N-substituted imidazole
Monosaccharide
Heteroaromatic compound
Tetrahydrofuran
Imidazole
Cyclic alcohol
Azole
Carbothioic s-ester
Cyclic ketone
Thiocarboxylic acid ester
Secondary alcohol
Ketone
Amino acid or derivatives
Oxacycle
Azacycle
Organoheterocyclic compound
Sulfenyl compound
Thiocarboxylic acid or derivatives
Carboxylic acid derivative
Carboximidic acid derivative
Carboximidic acid
Organic nitrogen compound
Organic oxygen compound
Organopnictogen compound
Organic oxide
Hydrocarbon derivative
Primary amine
Organosulfur compound
Organooxygen compound
Organonitrogen compound
Carbonyl group
Amine
Alcohol
Organic anion
Aromatic heteropolycyclic compound

Molecular Framework

Aromatic heteropolycyclic compounds

External Descriptors

Not Available

Functional Ontology

Not Available

Physical Properties

State

Expected Solid

Predicted Properties

Property	Value	Source
logP	-1.3	ChemAxon
pKa (Strongest Acidic)	0.82	ChemAxon
pKa (Strongest Basic)	4.16	ChemAxon
Physiological Charge	-4	ChemAxon
Hydrogen Acceptor Count	22	ChemAxon
Hydrogen Donor Count	7	ChemAxon
Polar Surface Area	439.46 Å²	ChemAxon
Rotatable Bond Count	24	ChemAxon
Refractivity	289.23 m³·mol⁻¹	ChemAxon
Polarizability	111.91 Å³	ChemAxon
Number of Rings	7	ChemAxon
Bioavailability	No	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	Yes	ChemAxon

Spectra

Not Available

Biological Properties

Cellular Locations

Not Available

Biospecimen Locations

Not Available

Tissue Locations

Not Available

Associated OMIM IDs

114500 (Colorectal cancer)
610247 (Eosinophilic esophagitis)

Human Proteins and Enzymes

Protein ID	Protein Name	Protein Type	Uniprot ID	Species

Human Pathways

Pathways

Name	SMPDB/PathBank

Metabolic Reactions

Reaction ID	Precursor	Product	Enzyme	Reaction Type	Data Source	Reference
MMDBr0016611	Choloyl-CoA	7alpha,12alpha-dihydroxy-3-oxochol-24-oyl-CoA	3alpha-hydroxy bile acid-CoA-ester 3-dehydrogenase 1/3	Dehydrogenation	RHEA	34755880
MMDBr0016838	7alpha,12alpha-dihydroxy-3-oxochol-24-oyl-CoA	7alpha,12alpha-dihydroxy-3-oxochol-4-en-24-oyl-CoA	3-oxocholoyl-CoA 4-desaturase	Desaturation	RHEA	34755880
MMDBr0038898	7alpha,12alpha-dihydroxy-3-oxochol-24-oyl-CoA	7alpha,12alpha-dihydroxy-3-oxo-5beta-cholan-24-oic acid	Thioesterase TesA	Hydrolysis	RHEA	34755880

Health Effects and Bioactivity

Health Outcome/Bioactivity	Metabolite Response/Effect	Evidence Type	Host and Biospecimen	Data Source	Reference

Microbial Sources

Superkingdom/Kingdom	Phylum	Total species	Hosts and Body Sites	Microbial Links
Bacteria	Firmicutes	1	Human ; Human feces

Exposure Sources

Source Type	Source Sub-type	Species	Data Source	Reference

Host Biospecimen and Location

Host and Biospecimen	Status	Mean	Std	Min	Max	Units	Age	Sex	Health Condition	Data Source	Reference

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FooDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

3-OXO-CHOLYL-COA

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

126843486

PDB ID

Not Available

ChEBI ID

136700

Food Biomarker Ontology

Not Available

References

Synthesis Reference

Not Available

General References

Bansal P, Morgat A, Axelsen KB, Muthukrishnan V, Coudert E, Aimo L, Hyka-Nouspikel N, Gasteiger E, Kerhornou A, Neto TB, Pozzato M, Blatter MC, Ignatchenko A, Redaschi N, Bridge A: Rhea, the reaction knowledgebase in 2022. Nucleic Acids Res. 2022 Jan 7;50(D1):D693-D700. doi: 10.1093/nar/gkab1016. [PubMed:34755880 ]

Showing metabocard for 7alpha,12alpha-dihydroxy-3-oxochol-24-oyl-CoA (MMDBc0055640)

MOL for #<Metabolite:0x000055d24b260200>

3D MOL for #<Metabolite:0x000055d24b260200>

3D SDF for #<Metabolite:0x000055d24b260200>

3D-SDF for #<Metabolite:0x000055d24b260200>

PDB for #<Metabolite:0x000055d24b260200>

3D PDB for #<Metabolite:0x000055d24b260200>

SMILES for #<Metabolite:0x000055d24b260200>

INCHI for #<Metabolite:0x000055d24b260200>

Structure for #<Metabolite:0x000055d24b260200>

3D Structure for #<Metabolite:0x000055d24b260200>