MiMeDB: Lactobacillus casei (MMDBm0000493)

Microbe Identification

Microbe name

Lactobacillus casei

NCBI Taxonomy ID

1582

Microbe Taxonomy

Superkingdom

Bacteria

Kingdom

Eubacteria

Phylum

Firmicutes

Class

Bacilli

Order

Lactobacillales

Family

Lactobacillaceae

Genus

Lactobacillus

Species

casei

Strain

Not Available

Microbe Properties

Gram staining properties

Positive

Shape

Bacilli

Mobility

Not Available

Flagellar presence

Not Available

Number of membranes

Not Available

Oxygen preference

Facultative anaerobe

Optimal temperature

Not Available

Temperature range

Not Available

Habitat

Not Available

Biotic relationship

Not Available

Cell arrangement

Not Available

Sporulation

Not Available

Metabolism

Not Available

Energy source

Not Available

Host and Biospecimens

Host	Body site	Biospecimen	Details	Data Source	Reference
Human				Human Oral Microbiome Database (HOMD)	20624719
Human	Large intestine	Supragingival plaque		Disbiome	31365560

Health Effects

Host	Related Health Condition	Biospecimen	Microbal response/effect	Data Source	Reference

Related Metabolites

Metabolic Reactions

Reactions

Reaction ID	Precursor	Product	Enzyme	Reaction Type	Data Source	Reference
MMDBr0013038	diphosphate	Phosphoribosyl pyrophosphate	Tryptophan biosynthesis protein TrpCD	Transfer of a ribosyl group	RHEA	34755880
MMDBr0013081	(6R)-5,10-methylene-5,6,7,8-tetrahydrofolic acid	7,8-dihydrofolate monoglutamate	Bifunctional dihydrofolate reductase-thymidylate synthase	Reduction; Synthesis	RHEA	34755880
MMDBr0013223	5-dehydro-2-deoxy-D-gluconic acid	6-phosphonato-5-dehydro-2-deoxy-D-gluconate(3-)	5-dehydro-2-deoxygluconokinase	Phosphorylation	RHEA	34755880
MMDBr0013276	Galactose 1-phosphate	Glucose 1-phosphate	Galactose-1-phosphate uridylyltransferase	Transfer of an uridylyl group	RHEA	34755880
MMDBr0013281	scyllo-Inosose	3D-3,5/4-trihydroxycyclohexane-1,2-dione	Inosose dehydratase	Hydration/dehydration of C-O bond	RHEA	34755880
MMDBr0013382	(6S)-5,6,7,8-tetrahydrofolic acid	7,8-dihydrofolate monoglutamate	Bifunctional dihydrofolate reductase-thymidylate synthase	Reduction	RHEA	34755880
MMDBr0013589	Inositol	Hydrogen Ion	Inositol 2-dehydrogenase	Dehydrogenation	RHEA	34755880
MMDBr0014038	2-Methyl-3-oxopropanoic acid	Hydrogen Ion	Malonate-semialdehyde dehydrogenase	Dehydrogenation	RHEA	34755880
MMDBr0014114	N-(5-Phospho-D-ribosyl)anthranilate	1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate	Phosphoribosyl isomerase A	Isomerization	RHEA	34755880
MMDBr0014178	Uridine diphosphate glucose	Uridine diphosphategalactose	UDP-glucose 4-epimerase	Epimerization	RHEA	34755880
MMDBr0014280	Malonic semialdehyde	Acetyl-CoA	Malonate-semialdehyde dehydrogenase	Dehydrogenation	RHEA	34755880
MMDBr0014336	L-Lactic acid	Hydrogen Ion	L-lactate dehydrogenase	Dehydrogenation	RHEA	34755880
MMDBr0014340	1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate	(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate	Indole-3-glycerol phosphate synthase	Synthesis	RHEA	34755880
MMDBr0014586	Inositol	Hydrogen Ion	Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase	Dehydrogenation	RHEA	34755880
MMDBr0014587	3D-3,5/4-trihydroxycyclohexane-1,2-dione	5-deoxy-D-glucuronic acid	3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase	Hydrolysis of bond	RHEA	34755880
MMDBr0014588	5-deoxy-D-glucuronic acid	5-dehydro-2-deoxy-D-gluconic acid	5-deoxy-glucuronate isomerase	Isomerization	RHEA	34755880
MMDBr0016907	Adenosine triphosphate	ADP	ATP synthase subunit alpha	ATP hydrolysis; Synthesis	RHEA	34755880
MMDBr0017834	(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate	D-Glyceraldehyde 3-phosphate	Tryptophan synthase	Synthesis	RHEA	34755880
MMDBr0017867	5-Phosphoribosylamine	Phosphoribosyl pyrophosphate	Amidophosphoribosyltransferase	Transfer of a ribosyl group	RHEA	34755880
MMDBr0017874	Water	L-Glutamic acid	Thermolabile glutaminase	Synthesis	RHEA	34755880
MMDBr0017879	Adenosine triphosphate	2-formamido-N(1)-(5-O-phospho-beta-D-ribosyl)acetamidine	Phosphoribosylformylglycinamidine synthase	Synthesis	RHEA	34755880
MMDBr0017915	Acetyl-CoA	CoA	Serine acetyltransferase	N-Acetylation	RHEA	34755880
MMDBr0024353	L-Glutamic acid	Hydrogen Ion	Probable bifunctional folylpolyglutamate synthase/dihydropteroate synthase	Synthesis	RHEA	34755880
MMDBr0024360	Adenosine triphosphate	diphosphate	Valine--tRNA ligase	Ligation	RHEA	34755880
MMDBr0024454	D-Galactose	Hydrogen Ion	Galactokinase	Phosphorylation	RHEA	34755880
MMDBr0025057	Alpha-Lactose	L-Histidine	PTS system lactose-specific EIICB component	Phosphorylation	RHEA	34755880
MMDBr0025235	L-Serine	Hydrogen Ion	HPr kinase/phosphorylase	Phosphorylation	RHEA	34755880
MMDBr0025236	Hydrogen Ion	L-Serine	HPr kinase/phosphorylase	Phosphorylation	RHEA	34755880
MMDBr0025322	keto-L-sorbose	L-Histidine	PTS system sorbose-specific EIIB component		RHEA	34755880
MMDBr0025405	L-Glutamic acid	Hydrogen Ion	Dihydrofolate synthase/folylpolyglutamate synthase	Synthesis	RHEA	34755880
MMDBr0025406	L-Glutamic acid	Hydrogen Ion	Dihydrofolate synthase/folylpolyglutamate synthase	Synthesis	RHEA	34755880

Genome Data

Genome Link

MMDBm0000493

Genome Length

2966714 bp

# Predicted Proteins

2801

GenBank Sequence Modification Date

17-FEB-2022

MiMeDB Deposition Date

2022-08-28 03:47:45 UTC

Reference

PMID: 17704766

Source Links

GenBank

NZ_AP012544