MiMeDB: Bacillus cereus Q1 (MMDBm0001265)

Microbe Identification

Microbe name

Bacillus cereus Q1

NCBI Taxonomy ID

361100

Microbe Taxonomy

Superkingdom

Bacteria

Kingdom

Eubacteria

Phylum

Firmicutes

Class

Bacilli

Order

Bacillales

Family

Bacillaceae

Genus

Bacillus

Species

cereus

Strain

Microbe Properties

Gram staining properties

Positive

Shape

Bacilli

Mobility

Yes

Flagellar presence

Yes

Number of membranes

Oxygen preference

Aerobe

Optimal temperature

Temperature range

Mesophilic

Habitat

Terrestrial

Biotic relationship

Free living

Cell arrangement

Chains

Sporulation

Chains

Metabolism

Respiration or fermentation of carbohydrates and central metabolism intermediates

Energy source

Not Available

Host and Biospecimens

Host	Body site	Biospecimen	Details	Data Source	Reference
Human	Gut	Feces	Expected but not quantified

Health Effects

Host	Related Health Condition	Biospecimen	Microbal response/effect	Data Source	Reference

Related Metabolites

Metabolic Reactions

Reactions

Reaction ID	Precursor	Product	Enzyme	Reaction Type	Data Source	Reference
MMDBr0012860	(2R)-2-phosphoglyceric acid	Phosphoenolpyruvic acid	Enolase	Enolization	RHEA	34755880
MMDBr0012889	Pyroglutamic acid	L-Glutamic acid	5-oxoprolinase	Hydrolysis	RHEA	34755880
MMDBr0012943	Xanthylic acid	Phosphoribosyl pyrophosphate	Xanthine-guanine phosphoribosyltransferase	Transfer of a ribosyl group	RHEA	34755880
MMDBr0012953	(R)-Pantoate	Pantothenic acid	Pantothenate synthetase	Ligation; Phosphorylation; Synthesis	RHEA	34755880
MMDBr0012954	L-Aspartic acid	Argininosuccinic acid	Argininosuccinate synthase	Synthesis	RHEA	34755880
MMDBr0012970	D-erythro-1-(Imidazol-4-yl)glycerol 3-phosphate	3-(Imidazol-4-yl)-2-oxopropyl phosphate	Imidazoleglycerol-phosphate dehydratase	Hydration/dehydration of C-O bond; Synthesis	RHEA	34755880
MMDBr0012975	Glycerol 3-phosphate	Dihydroxyacetone phosphate	Glycerol-3-phosphate dehydrogenase [NAD(+)]	Dehydrogenation	RHEA	34755880
MMDBr0012976	Glycerol 3-phosphate	Dihydroxyacetone phosphate	Glycerol-3-phosphate dehydrogenase [NAD(P)+]	Dehydrogenation	RHEA	34755880
MMDBr0013026	Orotidylic acid	Uridine 5'-monophosphate	Orotidine 5'-phosphate decarboxylase	Decarboxylation	RHEA	34755880
MMDBr0013027	CMP	CDP	Cytidylate kinase	Phosphorylation	RHEA	34755880
MMDBr0013038	N-(5-Phospho-D-ribosyl)anthranilate	Phosphoribosyl pyrophosphate	Tryptophan biosynthesis protein TrpCD	Transfer of a ribosyl group	RHEA	34755880
MMDBr0013083	Glucose 1-phosphate	ADP-alpha-D-glucose	Glucose-1-phosphate adenylyltransferase	Reversible transfer of an adenylyl group	RHEA	34755880
MMDBr0013088	Glucosamine 6-phosphate	beta-D-Fructose 6-phosphate	D-galactosamine-6-phosphate deaminase AgaS	Deamination; Isomerization	RHEA	34755880
MMDBr0013173	Uridine 5'-monophosphate	Phosphoribosyl pyrophosphate	Bifunctional protein PyrR	Transfer of phosphoribosyl group	RHEA	34755880
MMDBr0013184	(S)-2,3,4,5-tetrahydrodipicolinate	N_Acetyl_L_2_amino_6_oxopimelate	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase	Acetylation	RHEA	34755880
MMDBr0013186	4-Imidazolone-5-propionic acid	Trans-urocanate	Urocanate hydratase	Hydration/dehydration of C-O bond	RHEA	34755880
MMDBr0013187	Shikimate	Shikimate 3-phosphate	Pentafunctional AROM polypeptide	Phosphorylation	RHEA	34755880
MMDBr0013194	Porphobilinogen	Hydroxymethylbilane	Porphobilinogen deaminase	Deamination	RHEA	34755880
MMDBr0013212	7-Aminomethyl-7-carbaguanine	7-Cyano-7-carbaguanine	NADPH-dependent 7-cyano-7-deazaguanine reductase	Reduction	RHEA	34755880
MMDBr0013224	N-acetyl-alpha-D-glucosamine 1-phosphate	Uridine diphosphate-N-acetylglucosamine	Bifunctional protein GlmU	N-Acetylation; Phosphorylation; Isomerization	RHEA	34755880
MMDBr0013225	L-Dihydroorotic acid	orotate	Dihydroorotate dehydrogenase B (NAD(+)), catalytic subunit	Dehydrogenation	RHEA	34755880
MMDBr0013226	5-Thymidylic acid	dTDP	Putative thymidylate kinase	Phosphorylation	RHEA	34755880
MMDBr0013234	butanoic acid	Butanoyl phosphate	Probable butyrate kinase	Phosphorylation	RHEA	34755880
MMDBr0013246	2-C-methyl-D-erythritol 4-phosphate	1-Deoxy-D-xylulose 5-phosphate	1-deoxy-D-xylulose 5-phosphate reductoisomerase	Isomerization	RHEA	34755880
MMDBr0013248	alpha-D-Glucosamine 1-phosphate	N-acetyl-alpha-D-glucosamine 1-phosphate	Bifunctional protein GlmU	N-Acetylation	RHEA	34755880
MMDBr0013274	L-Homoserine	O-Phosphohomoserine	Homoserine kinase	Phosphorylation	RHEA	34755880
MMDBr0013295	(S)-4-Amino-5-oxopentanoate	5-Aminolevulinic acid	Glutamate-1-semialdehyde 2,1-aminomutase	Non-hydrolytic bond cleavage (or its reversal)	RHEA	34755880
MMDBr0013319	2-hydroxy-5-methylsulfanyl-3-oxopent-1-enyl phosphate	1,2-dihydroxy-5-(methylsulfanyl)pent-1-en-3-one	Bifunctional enzyme MtnB/MtnX	Dephosphorylation	RHEA	34755880
MMDBr0013333	N-Acetylglutamic acid	N-Acetyl-L-glutamyl 5-phosphate	Protein ARG5,6, mitochondrial	Phosphorylation	RHEA	34755880
MMDBr0013357	(2R)-3-phosphoglyceric acid	(2R)-3-phospho-glyceroyl phosphate	Phosphoglycerate kinase	Phosphorylation	RHEA	34755880
MMDBr0013370	L-Glutamic acid	gamma-L-Glutamyl 5-phosphate	Glutamate 5-kinase	Phosphorylation	RHEA	34755880
MMDBr0013431	1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide	5-[(5-phospho-1-deoxy-D-ribulos-1-ylimino)methylamino]-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamide	1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase	Isomerization	RHEA	34755880
MMDBr0013437	5-Methylthioribulose 1-phosphate	5-(methylsulfanyl)-2,3-dioxopentyl phosphate	Probable bifunctional methylthioribose-1-phosphate isomerase/methylthioribulose-1-phosphate dehydratase	Dehydration and isomerisation	RHEA	34755880
MMDBr0013470	(2R)-2-phosphoglyceric acid	(2R)-3-phosphoglyceric acid	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	Intramolecular transfer of functional group	RHEA	34755880
MMDBr0013495	beta-D-Fructose 6-phosphate	beta-D-Fructose 1,6-bisphosphate	ATP-dependent 6-phosphofructokinase	Phosphorylation	RHEA	34755880
MMDBr0013529	D-Glutamate	UDP-N-acetyl-alpha-D-muramoyl-L-alanyl-D-glutamic acid	UDP-N-acetylmuramoylalanine--D-glutamate ligase	Ligation	RHEA	34755880
MMDBr0013547	Uridine triphosphate	Cytidine triphosphate	CTP synthase	Synthesis	RHEA	34755880
MMDBr0013571	Uridine	Uridine 5'-monophosphate	Putative uridine kinase DAS2	Phosphorylation	RHEA	34755880
MMDBr0013602	2-Succinylbenzoate	2-Succinylbenzoyl-CoA	2-succinylbenzoate--CoA ligase	Ligation	RHEA	34755880
MMDBr0013605	Ciliatine	L-Alanine	2-aminoethylphosphonate--pyruvate transaminase	Hydrolysis of bond	RHEA	34755880
MMDBr0013659	Guanosine triphosphate	7,8-dihydroneopterin 3'-triphosphate	Bifunctional protein FolKE	Hydrolysis	RHEA	34755880
MMDBr0013674	Succinic acid	Succinyl-CoA	Succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial	Ligation	RHEA	34755880
MMDBr0013681	Shikimate	3-Dehydroshikimic acid	Pentafunctional AROM polypeptide	Dehydrogenation	RHEA	34755880
MMDBr0013683	S-Ribosyl-L-homocysteine	(4S)-4,5-Dihydroxypentan-2,3-dione	S-ribosylhomocysteine lyase	Non-hydrolytic bond cleavage (or its reversal)	RHEA	34755880
MMDBr0013703	Dihydroxyacetone phosphate	BPG	Methylglyoxal synthase	Synthesis	RHEA	34755880
MMDBr0013768	4-(Cytidine 5'-diphospho)-2-C-methyl-D-erythritol	2-Phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase	Phosphorylation	RHEA	34755880
MMDBr0013770	Inosinic acid	Phosphoribosyl formamidocarboxamide	Bifunctional purine biosynthesis protein PurH	Hydrolysis; Synthesis	RHEA	34755880
MMDBr0013771	D-Ribulose 5-phosphate	L-3,4-Dihydroxybutan-2-one 4-phosphate	3,4-dihydroxy-2-butanone 4-phosphate synthase	Synthesis	RHEA	34755880
MMDBr0013773	1-(5-phosphoribosyl)-ATP	Phosphoribosyl pyrophosphate	ATP phosphoribosyltransferase	Transfer of a ribosyl group	RHEA	34755880
MMDBr0013790	Oxalacetic acid	Phosphoenolpyruvic acid	Phosphoenolpyruvate carboxykinase (ATP)	Phosphorylation	RHEA	34755880
MMDBr0013806	5-(methylsulfanyl)-2,3-dioxopentyl phosphate	2-hydroxy-5-methylsulfanyl-3-oxopent-1-enyl phosphate	2,3-diketo-5-methylthiopentyl-1-phosphate enolase	Enolization	RHEA	34755880
MMDBr0013809	Ribose-1-phosphate	D-Ribose-5-phosphate	Phosphopentomutase	Transfers of a phosphate group; Isomerization; Intramolecular transfer of functional group	RHEA	34755880
MMDBr0013820	Phosphonoacetaldehyde	Acetaldehyde	Phosphonoacetaldehyde hydrolase	Hydrolysis of bond	RHEA	34755880
MMDBr0013843	Thymidine	5-Thymidylic acid	Thymidine kinase	Phosphorylation	RHEA	34755880
MMDBr0013884	L-Aspartic acid	beta-Alanine	L-aspartate decarboxylase dtxS4	Decarboxylation	RHEA	34755880
MMDBr0013886	Carbamoylphosphate	Citrulline	Ornithine carbamoyltransferase	Transfer of a carbamoyl group	RHEA	34755880
MMDBr0013895	L-Glutamic-gamma-semialdehyde	gamma-L-Glutamyl 5-phosphate	Gamma-glutamyl phosphate reductase	Reduction	RHEA	34755880
MMDBr0013908	Guanosine triphosphate	Guanosine diphosphate	GTPase ArgK	Dephosphorylation; Hydrolysis; Nucleic acid synthesis and/or repair	RHEA	34755880
MMDBr0013921	(R)-4'-phosphopantetheine	3'-dephospho-CoA	Phosphopantetheine adenylyltransferase	Dephosphorylation	RHEA	34755880
MMDBr0013946	Carbamoylphosphate	N-carbamoyl-L-aspartate	Protein pyrABCN	Transfer of a carbamoyl group	RHEA	34755880
MMDBr0013952	1-(5-phosphoribosyl)-5'-AMP	1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide	Histidine biosynthesis bifunctional protein HisIE	Hydrolysis; Synthesis	RHEA	34755880
MMDBr0013966	(6S)-5,6,7,8-tetrahydrofolic acid	(6S)-10-formyltetrahydrofolic acid	C-1-tetrahydrofolate synthase, cytoplasmic	Ligation; Synthesis	RHEA	34755880
MMDBr0013987	N-acetyl-(2S,6S)-2,6-diaminoheptanedioic acid	LL-2,6-Diaminoheptanedioate	N-acetyldiaminopimelate deacetylase	Deacetylation	RHEA	34755880
MMDBr0014038	2-Methyl-3-oxopropanoic acid	Hydrogen carbonate	Malonate-semialdehyde dehydrogenase	Dehydrogenation	RHEA	34755880
MMDBr0014068	3-Dehydroquinate	3-Dehydroshikimic acid	Catabolic 3-dehydroquinase	Hydration/dehydration of C-O bond; Synthesis	RHEA	34755880
MMDBr0014105	(S)-malate(2-)	Oxalacetic acid	Malate dehydrogenase	Dehydrogenation	RHEA	34755880
MMDBr0014111	alpha-Ketoisovaleric acid	2-Isopropylmalic acid	Isopropyl malate synthase AMT7	Synthesis	RHEA	34755880
MMDBr0014114	N-(5-Phospho-D-ribosyl)anthranilate	1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate	Phosphoribosyl isomerase A	Isomerization	RHEA	34755880
MMDBr0014117	N-Acetyl-L-glutamate 5-semialdehyde	N-Acetyl-L-glutamyl 5-phosphate	Protein ARG5,6, mitochondrial	Reduction	RHEA	34755880
MMDBr0014126	Glycerol	Glycerol 3-phosphate	Glycerol kinase	Phosphorylation	RHEA	34755880
MMDBr0014142	heme b	biliverdin IXalpha	Heme-degrading monooxygenase	Oxygenation	RHEA	34755880
MMDBr0014159	Formamide	formate	Formamidase	Amide hydrolysis	RHEA	34755880
MMDBr0014160	3-deoxy-D-arabino-heptulosonate-7-phosphate	3-Dehydroquinate	Pentafunctional AROM polypeptide	Phosphorylation; Synthesis	RHEA	34755880
MMDBr0014180	(6S)-10-formyltetrahydrofolic acid	(6S)-5,6,7,8-tetrahydrofolic acid	Bifunctional purine biosynthesis protein PurH	Synthesis	RHEA	34755880
MMDBr0014190	5-Methylthioribose	S-Methyl-5-thio-alpha-D-ribose 1-phosphate	5-deoxyribose kinase	Phosphorylation	RHEA	34755880
MMDBr0014193	2-Methyl-4-amino-5-hydroxymethylpyrimidine diphosphate	thiamine phosphate	Probable thiamine biosynthetic bifunctional enzyme	Synthesis	RHEA	34755880
MMDBr0014215	P1,P4-Bis(5'-guanosyl) tetraphosphate	GMP	Bis(5'-nucleosyl)-tetraphosphatase [asymmetrical]	Dephosphorylation	RHEA	34755880
MMDBr0014229	5-Amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate	(2S)-2-[5-Amino-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamido]succinic acid	Phosphoribosylaminoimidazole-succinocarboxamide synthase	Synthesis	RHEA	34755880
MMDBr0014251	(6R)-5,10-methylene-5,6,7,8-tetrahydrofolic acid	5,10-Methenyltetrahydrofolate	C-1-tetrahydrofolate synthase, cytoplasmic	Synthesis	RHEA	34755880
MMDBr0014256	1-(5-phosphoribosyl)-ATP	1-(5-phosphoribosyl)-5'-AMP	Phosphoribosyl-ATP pyrophosphatase	Dephosphorylation; Synthesis	RHEA	34755880
MMDBr0014257	nicotinate beta-D-ribonucleotide	Nicotinic acid adenine dinucleotide	Probable nicotinate-nucleotide adenylyltransferase	Reversible transfer of an adenylyl group	RHEA	34755880
MMDBr0014282	2-formamido-N(1)-(5-O-phospho-beta-D-ribosyl)acetamidine	5-Aminoimidazole ribonucleotide	Bifunctional purine biosynthetic protein ADE5,7	Ligation	RHEA	34755880
MMDBr0014311	Isopentenyl pyrophosphate	Dimethylallylpyrophosphate	Isopentenyl-diphosphate Delta-isomerase	Isomerization	RHEA	34755880
MMDBr0014323	L-Alanine	UDP-N-acetyl-alpha-D-muramoyl-L-alanine	Bifunctional enzyme MurC/Ddl	Ligation	RHEA	34755880
MMDBr0014333	alpha-D-Glucosamine 1-phosphate	D-glucosamine 6-phosphate	Phosphoglucosamine mutase	Intramolecular transfer of functional group	RHEA	34755880
MMDBr0014340	1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate	(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate	Indole-3-glycerol phosphate synthase	Synthesis	RHEA	34755880
MMDBr0014365	4-Imidazolone-5-propionic acid	Formiminoglutamic acid	Imidazolonepropionase	Non-hydrolytic bond cleavage (or its reversal)	RHEA	34755880
MMDBr0014369	5,10-Methenyltetrahydrofolate	(6S)-10-formyltetrahydrofolic acid	C-1-tetrahydrofolate synthase, cytoplasmic	Reversible cyclization	RHEA	34755880
MMDBr0014392	2-Phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol	2-C-Methyl-D-erythritol-2,4-cyclodiphosphate	Bifunctional enzyme IspD/IspF	Synthesis	RHEA	34755880
MMDBr0014426	4-Methyl-5-(2-hydroxyethyl)-thiazole	4-methyl-5-(2-phosphooxyethyl)-thiazole	Probable thiamine biosynthetic bifunctional enzyme	Phosphorylation	RHEA	34755880
MMDBr0014437	L-Dihydroorotic acid	N-carbamoyl-L-aspartate	Dihydroorotase	Hydrolysis	RHEA	34755880
MMDBr0014472	Cytidine	CMP	Cytidine kinase	Phosphorylation	RHEA	34755880
MMDBr0014486	(R)-2,3-Dihydroxy-isovalerate	alpha-Ketoisovaleric acid	Dihydroxy-acid dehydratase, mitochondrial	Hydration/dehydration of C-O bond	RHEA	34755880
MMDBr0014487	(R)-2,3-Dihydroxy-isovalerate	alpha-Ketoisovaleric acid	Dihydroxy-acid dehydratase, mitochondrial	Hydration/dehydration of C-O bond	RHEA	34755880
MMDBr0017917	5-Aminoimidazole ribonucleotide	4-Amino-2-methyl-5-phosphomethylpyrimidine	Phosphomethylpyrimidine synthase	Synthesis	RHEA	34755880
MMDBr0014502	1,6-Anhydro-N-acetyl-beta-muramate	N-acetyl-D-muramate 6-phosphate	Anhydro-N-acetylmuramic acid kinase	Phosphorylation	RHEA	34755880
MMDBr0014514	dCMP	dCDP	Cytidylate kinase	Phosphorylation	RHEA	34755880
MMDBr0014559	beta-D-Ribopyranose	beta-D-ribofuranose	L-fucose mutarotase	Mutarotation	RHEA	34755880
MMDBr0014596	Dihydroxyacetone phosphate	Quinolinic acid	Quinolinate synthase	Synthesis	RHEA	34755880
MMDBr0014597	Dihydroxyacetone phosphate	Quinolinic acid	Quinolinate synthase	Synthesis	RHEA	34755880
MMDBr0014619	L-3,4-Dihydroxybutan-2-one 4-phosphate	6,7-Dimethyl-8-(1-D-ribityl)lumazine	6,7-dimethyl-8-ribityllumazine synthase	Synthesis	RHEA	34755880
MMDBr0014642	N-acetyl-D-muramate 6-phosphate	D-Lactic acid	N-acetylmuramic acid 6-phosphate etherase	Bond cleavage	RHEA	34755880
MMDBr0017926	L-Glutamine	Cytidine triphosphate	CTP synthase	Synthesis	RHEA	34755880
MMDBr0014718	(R)-2,3-Dihydroxy-3-methylpentanoate	2-Keto-3-methyl-valerate	Dihydroxy-acid dehydratase, mitochondrial	Hydration/dehydration of C-O bond	RHEA	34755880
MMDBr0014719	(R)-2,3-Dihydroxy-3-methylpentanoate	2-Keto-3-methyl-valerate	Dihydroxy-acid dehydratase, mitochondrial	Hydration/dehydration of C-O bond	RHEA	34755880
MMDBr0014763	7-Deaza-7-carboxyguanine	7-Cyano-7-carbaguanine	7-cyano-7-deazaguanine synthase	Synthesis	RHEA	34755880
MMDBr0014776	Farnesyl pyrophosphate	Fe(II)-heme o	Protoheme IX farnesyltransferase, mitochondrial	Farnesylation	RHEA	34755880
MMDBr0014825	di-trans,octa-cis-undecaprenyl phosphate	di-trans-octa-cis-undecaprenyl diphospho-N-acetyl-alpha-D-muramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine	Phospho-N-acetylmuramoyl-pentapeptide-transferase	Transfer of phospho-N-acetylmuramoyl-pentapeptide	RHEA	34755880
MMDBr0014846	Thymidine 5'-triphosphate	5-Thymidylic acid	dTTP/UTP pyrophosphatase	Dephosphorylation	RHEA	34755880
MMDBr0014908	Uridine triphosphate	Uridine 5'-monophosphate	dTTP/UTP pyrophosphatase	Dephosphorylation	RHEA	34755880
MMDBr0014980	L-Glutamic-gamma-semialdehyde	L-Glutamic acid	Delta-1-pyrroline-5-carboxylate dehydrogenase	Dehydrogenation	RHEA	34755880
MMDBr0017950	aldehydo-D-ribose 5-phosphate	L-Glutamic acid	Pyridoxal 5'-phosphate synthase subunit PDX1	Synthesis	RHEA	34755880
MMDBr0015136	3-Isopropylmalate	2-Isopropylmalic acid	3-isopropylmalate dehydratase large subunit gloJ	Isomerization	RHEA	34755880
MMDBr0015325	Guanosine triphosphate	Mo-molybdopterin guanine dinucleotide	Molybdenum cofactor guanylyltransferase	Synthesis	RHEA	34755880
MMDBr0015402	(S)-2,3,4,5-tetrahydrodipicolinate	(2S,4S)-4-Hydroxy-2,3,4,5-tetrahydrodipicolinate	4-hydroxy-tetrahydrodipicolinate reductase	Reduction	RHEA	34755880
MMDBr0015405	(S)-2,3,4,5-tetrahydrodipicolinate	(2S,4S)-4-Hydroxy-2,3,4,5-tetrahydrodipicolinate	4-hydroxy-tetrahydrodipicolinate reductase	Reduction	RHEA	34755880
MMDBr0015916	1-Hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate	2-C-Methyl-D-erythritol-2,4-cyclodiphosphate	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin)	Synthesis	RHEA	34755880
MMDBr0016358	2-[(2R,5Z)-2-Carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate	thiamine phosphate	Probable thiamine biosynthetic bifunctional enzyme	Synthesis	RHEA	34755880
MMDBr0016359	2-(2-Carboxy-4-methylthiazol-5-yl)ethyl phosphate	thiamine phosphate	Probable thiamine biosynthetic bifunctional enzyme	Synthesis	RHEA	34755880
MMDBr0016462	(8S)-3',8-cyclo-7,8-dihydroguanosine 5'-triphosphate	Cyclic pyranopterin monophosphate	Cyclic pyranopterin monophosphate synthase	Synthesis	RHEA	34755880
MMDBr0016828	Fe-coproporphyrin III	heme b	Coproheme decarboxylase	Decarboxylation	RHEA	34755880
MMDBr0016829	Fe-coproporphyrin III	heme b	Coproheme decarboxylase	Decarboxylation	RHEA	34755880
MMDBr0016917	Fe-coproporphyrin III	harderoheme III	Coproheme decarboxylase	Decarboxylation	RHEA	34755880
MMDBr0016918	Fe-coproporphyrin III	harderoheme III	Coproheme decarboxylase	Decarboxylation	RHEA	34755880
MMDBr0016919	Hydrogen peroxide	heme b	Coproheme decarboxylase	Decarboxylation	RHEA	34755880
MMDBr0016920	Hydrogen peroxide	heme b	Coproheme decarboxylase	Decarboxylation	RHEA	34755880
MMDBr0017834	(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate	D-Glyceraldehyde 3-phosphate	Tryptophan synthase	Synthesis	RHEA	34755880
MMDBr0017839	L-Aspartic acid	L-Asparagine	Aspartate--ammonia ligase	Ligation	RHEA	34755880
MMDBr0017871	(6R)-5,10-methylene-5,6,7,8-tetrahydrofolic acid	(6S)-5,6,7,8-tetrahydrofolic acid	Serine hydroxymethyltransferase	Methylation	RHEA	34755880
MMDBr0017874	L-Glutamine	L-Glutamic acid	Thermolabile glutaminase	Synthesis	RHEA	34755880
MMDBr0017879	L-Glutamine	2-formamido-N(1)-(5-O-phospho-beta-D-ribosyl)acetamidine	Phosphoribosylformylglycinamidine synthase	Synthesis	RHEA	34755880
MMDBr0017882	Hydrogen carbonate	Carbamoylphosphate	Carbamoyl-phosphate synthase small chain	Synthesis	RHEA	34755880
MMDBr0017897	L-Methionine	S-Adenosylmethionine	S-adenosylmethionine synthase	Synthesis	RHEA	34755880
MMDBr0017898	5-methyltetrahydropteroyltri-L-glutamate	L-Methionine	5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase	Methylation	RHEA	34755880
MMDBr0017903	L-Histidine	Trans-urocanate	Histidine ammonia-lyase	Non-hydrolytic bond cleavage (or its reversal)	RHEA	34755880
MMDBr0017916	5-[(5-phospho-1-deoxy-D-ribulos-1-ylimino)methylamino]-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamide	AICAR	Imidazole glycerol phosphate synthase subunit HisH	Synthesis	RHEA	34755880
MMDBr0024368	L-Isoleucine	diphosphate	Isoleucine--tRNA ligase	Ligation	RHEA	34755880
MMDBr0024389	L-Leucine	diphosphate	Leucine--tRNA ligase	Ligation	RHEA	34755880
MMDBr0024401	L-Serine	Adenosine 3',5'-diphosphate	Holo-[acyl-carrier-protein] synthase	Dehydrogenation; Synthesis	RHEA	34755880
MMDBr0024408	alpha-Ketoglutarate	Carbon dioxide	Multifunctional 2-oxoglutarate metabolism enzyme	Dehydrogenation	RHEA	34755880
MMDBr0024411	L-Serine	Hydrogen Ion	Type-2 serine--tRNA ligase	Ligation	RHEA	34755880
MMDBr0024415	(S)-4-Amino-5-oxopentanoate	Hydrogen Ion	Glutamyl-tRNA reductase	Reduction	RHEA	34755880
MMDBr0024435	Deoxyribose 5-phosphate	Acetaldehyde	Deoxyribose-phosphate aldolase	Aldol addition (or reverse)	RHEA	34755880
MMDBr0024441	Hydrogen Ion	NADP(+)	NADPH dehydrogenase	Dehydrogenation	RHEA	34755880
MMDBr0024449	L-Methionine	diphosphate	Methionine--tRNA ligase	Ligation	RHEA	34755880
MMDBr0024465	Ornithine	L-Glutamic-gamma-semialdehyde	Ornithine aminotransferase	Amine group addition	RHEA	34755880
MMDBr0024474	L-Proline	diphosphate	Proline--tRNA ligase	Ligation	RHEA	34755880
MMDBr0024477	Cytidine triphosphate	diphosphate	CCA-adding enzyme	Synthesis and repair of 3'-terminal CCA sequence of tRNA	RHEA	34755880
MMDBr0024483	L-Glutamine	L-Glutamic acid	Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C	Amide group addition	RHEA	34755880
MMDBr0024539	Tetra-mu3-sulfido-tetrairon(2+)	5'-Deoxyadenosine	Lipoyl synthase	Synthesis	RHEA	34755880
MMDBr0024546	(6R)-5,10-methylene-5,6,7,8-tetrahydrofolic acid	(6S)-5,6,7,8-tetrahydrofolic acid	Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO	Methylation	RHEA	34755880
MMDBr0024548	(6S)-5,6,7,8-tetrahydrofolic acid	(6R)-5,10-methylene-5,6,7,8-tetrahydrofolic acid	Probable aminomethyltransferase	Methylation	RHEA	34755880
MMDBr0024557	Uridine diphosphate glucose	Uridine 5'-diphosphate	Processive diacylglycerol beta-glucosyltransferase	Synthesis	RHEA	34755880
MMDBr0024568	L-Glutamine	L-Glutamic acid	Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C	Amide group addition	RHEA	34755880
MMDBr0024578	Adenosine triphosphate	diphosphate	Cysteine--tRNA ligase	Ligation	RHEA	34755880
MMDBr0024586	L-Serine	Hydrogen Ion	Probable bifunctional tRNA threonylcarbamoyladenosine biosynthesis protein	Phosphorylation; Synthesis	RHEA	34755880
MMDBr0024593	ADP-alpha-D-glucose	Hydrogen Ion	Probable glycogen synthase	Synthesis	RHEA	34755880
MMDBr0024597	L-Aspartic acid	diphosphate	Aspartate--tRNA(Asp/Asn) ligase	Ligation	RHEA	34755880
MMDBr0024628	L-Phenylalanine	Hydrogen Ion	Phenylalanine--tRNA ligase beta subunit	Ligation	RHEA	34755880
MMDBr0024630	S-Adenosylmethionine	S-Adenosylhomocysteine	Ribosomal RNA small subunit methyltransferase A	Methylation	RHEA	34755880
MMDBr0024636	Phosphate	Ribose-1-phosphate	Probable 6-oxopurine nucleoside phosphorylase	Phosphorylation	RHEA	34755880
MMDBr0024700	L-Cystine	L-Cysteine	Adenosine 5'-phosphosulfate reductase	Reduction	RHEA	34755880
MMDBr0024707	di-mu-Sulfido-diiron(1+)	5'-Deoxyadenosine	Biotin synthase	Synthesis	RHEA	34755880
MMDBr0024750	Guanosine triphosphate	formate	GTP cyclohydrolase-2	Hydrolysis of bond; Synthesis	RHEA	34755880
MMDBr0024765	7-Aminomethyl-7-carbaguanine	Guanine	Putative queuine tRNA-ribosyltransferase	Transfer of a ribosyl group	RHEA	34755880
MMDBr0024770	di-mu-Sulfido-diiron(1+)	L-Cysteine	Probable tRNA sulfurtransferase	Sulfuration	RHEA	34755880
MMDBr0024774	Glycine	Carbon dioxide	Probable glycine dehydrogenase (decarboxylating) subunit 1	Dehydrogenation	RHEA	34755880
MMDBr0024778	(6S)-10-formyltetrahydrofolic acid	(6S)-5,6,7,8-tetrahydrofolic acid	Methionyl-tRNA formyltransferase	Transfer of a formyl group	RHEA	34755880
MMDBr0024782	di-mu-Sulfido-diiron(2+)	di-mu-Sulfido-diiron(1+)	4-hydroxy-3-methylbut-2-enyl diphosphate reductase	Reduction	RHEA	34755880
MMDBr0024789	di-mu-Sulfido-diiron(2+)	di-mu-Sulfido-diiron(1+)	4-hydroxy-3-methylbut-2-enyl diphosphate reductase	Reduction	RHEA	34755880
MMDBr0024808	1-Deoxy-D-xylulose 5-phosphate	2-[(2R,5Z)-2-Carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate	Thiazole synthase	Synthesis	RHEA	34755880
MMDBr0024813	Dimethylallylpyrophosphate	diphosphate	tRNA dimethylallyltransferase	Transfer of a dimethylallyl group	RHEA	34755880
MMDBr0024826	2-deoxy-alpha-D-ribose 1-phosphate	Deoxyribose 5-phosphate	Phosphopentomutase	Transfers of a phosphate group; Isomerization; Intramolecular transfer of functional group	RHEA	34755880
MMDBr0024883	S-Adenosylmethionine	Adenine	S-adenosylmethionine:tRNA ribosyltransferase-isomerase	Isomerization	RHEA	34755880
MMDBr0024957	Phosphate	2-deoxy-alpha-D-ribose 1-phosphate	Purine nucleoside phosphorylase	Phosphorylation	RHEA	34755880
MMDBr0024967	S-Adenosylmethionine	S-Adenosylhomocysteine	tRNA (guanine(37)-N1)-methyltransferase Trm5b	Methylation	RHEA	34755880
MMDBr0024993	Uridine diphosphate glucose	Uridine 5'-diphosphate	Processive diacylglycerol beta-glucosyltransferase	Transfer of a glucosyl group	RHEA	34755880
MMDBr0024994	Uridine diphosphate glucose	Uridine 5'-diphosphate	Processive diacylglycerol beta-glucosyltransferase	Glycosylation	RHEA	34755880
MMDBr0025050	L-Alanine	(S)-8-amino-7-oxononanoic acid	Putative 8-amino-7-oxononanoate synthase	Ligation; Synthesis	RHEA	34755880
MMDBr0025060	L-Serine	Hydrogen Ion	Type-2 serine--tRNA ligase	Ligation	RHEA	34755880
MMDBr0025066	S-Adenosylmethionine	S-Adenosylhomocysteine	Demethylmenaquinone methyltransferase	Methylation	RHEA	34755880
MMDBr0025071	S-Adenosylmethionine	S-Adenosylhomocysteine	tRNA (guanine-N(7)-)-methyltransferase	Methylation	RHEA	34755880
MMDBr0025102	di-mu-Sulfido-diiron(1+)	5'-Deoxyadenosine	Ribosomal RNA large subunit methyltransferase N	Methylation	RHEA	34755880
MMDBr0025105	S-Adenosylmethionine	S-Adenosylhomocysteine	Ribosomal RNA small subunit methyltransferase H	Methylation	RHEA	34755880
MMDBr0025145	di-mu-Sulfido-diiron(1+)	5'-Deoxyadenosine	Probable dual-specificity RNA methyltransferase RlmN	Methylation	RHEA	34755880
MMDBr0025148	Adenosine triphosphate	Hydrogen Ion	Protein-arginine kinase	Phosphorylation	RHEA	34755880
MMDBr0025177	L-Cysteine	Arsenite	Arsenate reductase	Reduction	RHEA	34755880
MMDBr0025214	(S)-malate(2-)	Oxalacetic acid	Probable malate:quinone oxidoreductase	Redox reaction	RHEA	34755880
MMDBr0025235	L-Serine	Hydrogen Ion	HPr kinase/phosphorylase	Phosphorylation	RHEA	34755880
MMDBr0025236	Hydrogen Ion	L-Serine	HPr kinase/phosphorylase	Phosphorylation	RHEA	34755880
MMDBr0025237	L-Threonine	Hydrogen Ion	Probable bifunctional tRNA threonylcarbamoyladenosine biosynthesis protein	Phosphorylation; Synthesis	RHEA	34755880
MMDBr0025258	Uridine 5'-monophosphate	L-Cysteine	tRNA-specific 2-thiouridylase MnmA	2-Thiolation of uridine	RHEA	34755880
MMDBr0025490	S-Adenosylmethionine	S-Adenosylhomocysteine	Ribosomal protein L11 methyltransferase	Methylation	RHEA	34755880
MMDBr0025493	L-Tyrosine	diphosphate	Protein adenylyltransferase MntA	Reversible transfer of an adenylyl group	RHEA	34755880
MMDBr0025494	L-Tyrosine	diphosphate	Protein adenylyltransferase SelO	Reversible transfer of an adenylyl group	RHEA	34755880
MMDBr0025495	L-Threonine	diphosphate	Protein adenylyltransferase SelO	Reversible transfer of an adenylyl group	RHEA	34755880
MMDBr0025496	L-Threonine	diphosphate	Protein adenylyltransferase SelO	Reversible transfer of an adenylyl group	RHEA	34755880
MMDBr0025514	Acetyl-CoA	Malonyl-CoA	Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha	Carboxylation	RHEA	34755880
MMDBr0025522	L-Glutamine	Ammonium	Protein-glutamine gamma-glutamyltransferase	Cross-linking of proteins and the conjugation of polyamines to proteins	RHEA	34755880
MMDBr0025556	D-Alanine	diphosphate	D-alanine--D-alanyl carrier protein ligase	Ligation	RHEA	34755880
MMDBr0025620	L-Cysteine	Sn-Glycerol-1-phosphate	Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase	Transfer of the diacylglyceryl group	RHEA	34755880
MMDBr0025650	Hydrogen Ion	Hydrogen Ion	NADH-quinone oxidoreductase subunit C/D	Redox reaction	RHEA	34755880
MMDBr0025654	L-Serine	diphosphate	Protein adenylyltransferase SelO	Reversible transfer of an adenylyl group	RHEA	34755880
MMDBr0025655	L-Serine	diphosphate	Protein adenylyltransferase SelO	Reversible transfer of an adenylyl group	RHEA	34755880
MMDBr0025656	Acetic acid	diphosphate	tRNA(Met) cytidine acetate ligase	Ligation	RHEA	34755880
MMDBr0025777	(6R)-5,10-methylene-5,6,7,8-tetrahydrofolic acid	(6S)-5,6,7,8-tetrahydrofolic acid	Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO	Methylation	RHEA	34755880
MMDBr0025806	Fe(II)-heme o	Fe(II)-heme a	Heme A synthase	Synthesis	RHEA	34755880
MMDBr0025807	Fe(II)-heme o	Fe(II)-heme a	Heme A synthase	Synthesis	RHEA	34755880
MMDBr0026014	Phosphate	Uridine 5'-diphosphate	Ribonuclease PH	RNA degradation	RHEA	34755880
MMDBr0026015	Phosphate	Uridine 5'-diphosphate	Ribonuclease PH	RNA degradation	RHEA	34755880
MMDBr0026016	Phosphate	Guanosine 3',5'-bis(diphosphate)	Ribonuclease PH	RNA degradation	RHEA	34755880
MMDBr0026017	Phosphate	Adenosine diphosphate	Ribonuclease PH	RNA degradation	RHEA	34755880
MMDBr0026139	Ornithine	L-Alanine	Ornithine aminotransferase	Amine group addition	RHEA	34755880
MMDBr0026140	2-Oxoarginine	L-Arginine	Ornithine aminotransferase	Amine group addition	RHEA	34755880
MMDBr0026141	2-oxosuccinamate	L-Asparagine	Ornithine aminotransferase	Amine group addition	RHEA	34755880
MMDBr0026142	Oxalacetic acid	L-Aspartic acid	Ornithine aminotransferase	Amine group addition	RHEA	34755880
MMDBr0026143	3-Mercaptopyruvic acid	L-Cysteine	Ornithine aminotransferase	Amine group addition	RHEA	34755880
MMDBr0026144	2-Keto-glutaramic acid	L-Glutamine	Ornithine aminotransferase	Amine group addition	RHEA	34755880
MMDBr0026145	Oxoglutaric acid	L-Glutamic acid	Ornithine aminotransferase	Amine group addition	RHEA	34755880
MMDBr0026146	Glyoxylic acid	Glycine	Ornithine aminotransferase	Amine group addition	RHEA	34755880
MMDBr0026147	3-Methyl-2-oxovaleric acid	L-Isoleucine	Ornithine aminotransferase	Amine group addition	RHEA	34755880
MMDBr0026148	Ketoleucine	L-Leucine	Ornithine aminotransferase	Amine group addition	RHEA	34755880
MMDBr0026149	2-Keto-6-aminocaproate	L-Lysine	Ornithine aminotransferase	Amine group addition	RHEA	34755880
MMDBr0026150	2-Oxo-4-methylthiobutanoic acid	L-Methionine	Ornithine aminotransferase	Amine group addition	RHEA	34755880
MMDBr0026151	Phenylpyruvic acid	L-Phenylalanine	Ornithine aminotransferase	Amine group addition	RHEA	34755880
MMDBr0026152	Hydroxypyruvic acid	L-Serine	Ornithine aminotransferase	Amine group addition	RHEA	34755880
MMDBr0026153	Indolepyruvate	L-Tryptophan	Ornithine aminotransferase	Amine group addition	RHEA	34755880
MMDBr0026154	4-Hydroxyphenylpyruvic acid	L-Tyrosine	Ornithine aminotransferase	Amine group addition	RHEA	34755880
MMDBr0026155	alpha-Ketoisovaleric acid	L-Valine	Ornithine aminotransferase	Amine group addition	RHEA	34755880

Genome Data

Genome Link

MMDBm0001265

Genome Length

5288684 bp

# Predicted Proteins

5384

GenBank Sequence Modification Date

17-FEB-2022

MiMeDB Deposition Date

2022-08-28 03:46:08 UTC

Reference

PMID: 17704766

Source Links

GenBank

NC_011969