MiMeDB: Yersinia enterocolitica (MMDBm0562391)

Microbe Identification

Microbe name

Yersinia enterocolitica

NCBI Taxonomy ID

630

Microbe Taxonomy

Superkingdom

Bacteria

Kingdom

Eubacteria

Phylum

Proteobacteria

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Yersiniaceae

Genus

Yersinia

Species

enterocolitica

Strain

Not Available

Microbe Properties

Gram staining properties

Positive

Shape

Not Available

Mobility

Not Available

Flagellar presence

Not Available

Number of membranes

Not Available

Oxygen preference

Facultative anaerobe

Optimal temperature

Not Available

Temperature range

Not Available

Habitat

Not Available

Biotic relationship

Not Available

Cell arrangement

Not Available

Sporulation

Not Available

Metabolism

Not Available

Energy source

Not Available

Host and Biospecimens

Host	Body site	Biospecimen	Details	Data Source	Reference
Human	Large intestine			BacDive	34718743
Human	Large intestine			BacDive	34718743

Health Effects

Host	Related Health Condition	Data Source
Human	Diarrhea	BacDive
Human	Diarrhea	BacDive
Human	Diarrhea	BacDive

Related Metabolites

Metabolic Reactions

Reactions

Reaction ID	Precursor	Product	Enzyme	Reaction Type	Data Source	Reference
MMDBr0013108	Adenosine triphosphate	ADP	Fe(3+) ions import ATP-binding protein FbpC	Transport	RHEA	34755880
MMDBr0013170	Adenosine monophosphate	ADP	Adenylate kinase	Phosphorylation	RHEA	34755880
MMDBr0013403	Glucose 1-phosphate	diphosphate	Glucose-1-phosphate thymidylyltransferase	N-Acetylation	RHEA	34755880
MMDBr0014005	Hydrogen Ion	Carbon dioxide	Urease subunit alpha	Hydrolysis of urea	RHEA	34755880
MMDBr0014021	Hydrogen Ion	Hydrogen peroxide	Methanobactin mb-OB3b	Dismutation	RHEA	34755880
MMDBr0014178	Uridine diphosphate glucose	Uridine diphosphategalactose	UDP-glucose 4-epimerase	Epimerization	RHEA	34755880
MMDBr0014221	Hydrogen Ion	Fe2+	Deferrochelatase/peroxidase EfeB	Chelation	RHEA	34755880
MMDBr0014964	Fe(III)-enterobactin	Fe(III)-[N-(2,3-dihydroxybenzoyl)-L-serine]	Iron(III) enterobactin esterase	Ester hydrolysis	RHEA	34755880
MMDBr0014965	Fe(III)-enterobactin	Fe(III)-[N-(2,3-dihydroxybenzoyl)-L-serine]	Iron(III) enterobactin esterase	Ester hydrolysis	RHEA	34755880
MMDBr0016747	Water	alpha-Ketoglutarate	Deaminated glutathione amidase	Amide hydrolysis	RHEA	34755880
MMDBr0016986	Fe(III)-enterobactin	Fe(III)-[N-(2,3-dihydroxybenzoyl)-L-serine]3	Iron(III) enterobactin esterase	Ester hydrolysis	RHEA	34755880
MMDBr0016987	Fe(III)-enterobactin	Fe(III)-[N-(2,3-dihydroxybenzoyl)-L-serine]3	Iron(III) enterobactin esterase	Ester hydrolysis	RHEA	34755880
MMDBr0016988	Fe(III)-[N-(2,3-dihydroxybenzoyl)-L-serine]3	Fe(III)-[N-(2,3-dihydroxybenzoyl)-L-serine]2	Iron(III) enterobactin esterase	Ester hydrolysis	RHEA	34755880
MMDBr0016989	Fe(III)-[N-(2,3-dihydroxybenzoyl)-L-serine]3	Fe(III)-[N-(2,3-dihydroxybenzoyl)-L-serine]2	Iron(III) enterobactin esterase	Ester hydrolysis	RHEA	34755880
MMDBr0016990	Fe(III)-[N-(2,3-dihydroxybenzoyl)-L-serine]2	Fe(III)-[N-(2,3-dihydroxybenzoyl)-L-serine]	Iron(III) enterobactin esterase	Ester hydrolysis	RHEA	34755880
MMDBr0016991	Fe(III)-[N-(2,3-dihydroxybenzoyl)-L-serine]2	Fe(III)-[N-(2,3-dihydroxybenzoyl)-L-serine]	Iron(III) enterobactin esterase	Ester hydrolysis	RHEA	34755880
MMDBr0024341	S-Adenosylmethionine	Hydrogen Ion	Acyl-homoserine-lactone synthase	Synthesis	RHEA	34755880
MMDBr0024580	UDP-3-O-(3-Hydroxytetradecanoyl)-D-glucosamine	Hydrogen Ion	UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase	Acylation	RHEA	34755880
MMDBr0024703	Hydrogen Ion	Water	Arsenate reductase	Reduction	RHEA	34755880
MMDBr0026010	Cytidine 3'-monophosphate	Cytidine	5'/3'-nucleotidase SurE	Hydrolysis of nucleotide	RHEA	34755880
MMDBr0026011	Guanosine 3'-phosphate	Guanosine	5'/3'-nucleotidase SurE	Hydrolysis of nucleotide	RHEA	34755880
MMDBr0026012	Uridine 3'-phosphate	Uridine	5'/3'-nucleotidase SurE	Hydrolysis of nucleotide	RHEA	34755880
MMDBr0026013	Adenosine 3'-phosphate	Adenosine	5'/3'-nucleotidase SurE	Hydrolysis of nucleotide	RHEA	34755880
MMDBr0026049	Guanosine 2',3'-cyclic phosphate	Guanosine 3'-phosphate	2',3'-cyclic-nucleotide 2'-phosphodiesterase	Hydrolysis of nucleotide; Dephosphorylation	RHEA	34755880
MMDBr0026050	Cytidine 2',3'-cyclic phosphate	Cytidine 3'-monophosphate	2',3'-cyclic-nucleotide 2'-phosphodiesterase	Hydrolysis of nucleotide; Dephosphorylation	RHEA	34755880
MMDBr0026051	Adenosine 2',3'-cyclic phosphate	Adenosine 3'-phosphate	2',3'-cyclic-nucleotide 2'-phosphodiesterase	Hydrolysis of nucleotide; Dephosphorylation	RHEA	34755880
MMDBr0026052	Uridine 2',3'-cyclic monophosphate	Uridine 3'-monophosphate	2',3'-cyclic-nucleotide 2'-phosphodiesterase	Hydrolysis of nucleotide; Dephosphorylation	RHEA	34755880

Genome Data

Genome Link

MMDBm0562391

Genome Length

4735416 bp

# Predicted Proteins

8897

GenBank Sequence Modification Date

17-FEB-2022

MiMeDB Deposition Date

2022-08-25 18:09:11 UTC

Reference

PMID: 17704766

Source Links

GenBank

CQAE00000000