MiMeDB: Vibrio parahaemolyticus (MMDBm0610876)

Microbe Identification

Microbe name

Vibrio parahaemolyticus

NCBI Taxonomy ID

Microbe Taxonomy

Superkingdom

Bacteria

Kingdom

Eubacteria

Phylum

Proteobacteria

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Species

parahaemolyticus

Strain

Not Available

Microbe Properties

Gram staining properties

Positive

Shape

Bacilli

Mobility

Yes

Flagellar presence

Yes

Number of membranes

2

Oxygen preference

Facultative anaerobe

Optimal temperature

20

Temperature range

Mesophilic

Habitat

Aquatic

Biotic relationship

Free living

Cell arrangement

Singles

Sporulation

Singles

Metabolism

Not Available

Energy source

Heterotroph

Host and Biospecimens

Host	Body site	Biospecimen	Details	Data Source	Reference
Human	Large intestine		Not Available	BacDive	34718743
Human	Large intestine		Not Available	BacDive	34718743

Health Effects

Host	Related Health Condition	Biospecimen	Microbal response/effect	Data Source	Reference
Human	Diarrhea			BacDive

Related Metabolites

Metabolic Reactions

Reactions

Reaction ID	Precursor	Product	Enzyme	Reaction Type	Data Source	Reference
MMDBr0026126	L-Alanine	D-Alanine	Broad substrate specificity amino-acid racemase	Racemization	RHEA	34755880
MMDBr0026127	L-Lysine	D-Lysine	Broad substrate specificity amino-acid racemase	Racemization	RHEA	34755880
MMDBr0026128	L-Serine	D-Serine	Broad substrate specificity amino-acid racemase	Racemization	RHEA	34755880
MMDBr0026129	L-Proline	D-Proline	Broad substrate specificity amino-acid racemase	Racemization	RHEA	34755880
MMDBr0026130	L-Cysteine	D-Cysteine	Broad substrate specificity amino-acid racemase	Racemization	RHEA	34755880
MMDBr0026131	L-Glutamine	D-Glutamine	Broad substrate specificity amino-acid racemase	Racemization	RHEA	34755880
MMDBr0026132	L-Aspartic acid	D-Aspartic acid	Broad substrate specificity amino-acid racemase	Racemization	RHEA	34755880
MMDBr0026133	L-Methionine	D-methionine	Broad substrate specificity amino-acid racemase	Racemization	RHEA	34755880
MMDBr0026134	L-Valine	D-Valine	Broad substrate specificity amino-acid racemase	Racemization	RHEA	34755880
MMDBr0026135	L-Phenylalanine	D-phenylalanine	Broad substrate specificity amino-acid racemase	Racemization	RHEA	34755880
MMDBr0026136	L-Tryptophan	D-Tryptophan	Broad substrate specificity amino-acid racemase	Racemization	RHEA	34755880
MMDBr0026137	L-Leucine	D-Leucine	Broad substrate specificity amino-acid racemase	Racemization	RHEA	34755880
MMDBr0026138	L-Tyrosine	D-Tyrosine	Broad substrate specificity amino-acid racemase	Racemization	RHEA	34755880
MMDBr0039017	L-Homoserine	D-homoserine	Broad specificity amino-acid racemase	Racemization	RHEA	34755880
MMDBr0039018	L-Leucine	D-Leucine	Broad specificity amino-acid racemase	Racemization	RHEA	34755880
MMDBr0039019	L-Phenylalanine	D-phenylalanine	Broad specificity amino-acid racemase	Racemization	RHEA	34755880
MMDBr0039020	L-Proline	D-Proline	Broad specificity amino-acid racemase	Racemization	RHEA	34755880
MMDBr0039021	L-Threonine	D-Threonine	Broad specificity amino-acid racemase	Racemization	RHEA	34755880
MMDBr0039022	L-Tyrosine	D-Tyrosine	Broad specificity amino-acid racemase	Racemization	RHEA	34755880
MMDBr0039023	L-Valine	D-Valine	Broad specificity amino-acid racemase	Racemization	RHEA	34755880

Genome Data

Genome Link

Genome Length

3335538 bp

# Predicted Proteins

3052

GenBank Sequence Modification Date

17-FEB-2022

MiMeDB Deposition Date

2022-08-28 03:47:56 UTC

Reference

Source Links

GenBank