MiMeDB: Streptomyces clavuligerus (MMDBm0696235)

Microbe Identification

Microbe name

Streptomyces clavuligerus

NCBI Taxonomy ID

1901

Microbe Taxonomy

Superkingdom

Bacteria

Kingdom

Eubacteria

Phylum

Actinobacteria

Class

Actinobacteria

Order

Streptomycetales

Family

Streptomycetaceae

Genus

Streptomyces

Species

clavuligerus

Strain

Not Available

Microbe Properties

Gram staining properties

Positive

Shape

Not Available

Mobility

Not Available

Flagellar presence

Not Available

Number of membranes

Not Available

Oxygen preference

Not Available

Optimal temperature

Not Available

Temperature range

Not Available

Habitat

Not Available

Biotic relationship

Not Available

Cell arrangement

Not Available

Sporulation

Not Available

Metabolism

Not Available

Energy source

Not Available

Host and Biospecimens

Host	Body site	Biospecimen	Details	Data Source	Reference
Human	Gut	Feces	Expected but not quantified

Health Effects

Host	Related Health Condition	Biospecimen	Microbal response/effect	Data Source	Reference

Related Metabolites

Metabolic Reactions

Reactions

Reaction ID	Precursor	Product	Enzyme	Reaction Type	Data Source	Reference
MMDBr0012922	D-Glyceraldehyde 3-phosphate	Hydrogen Ion	N(2)-(2-carboxyethyl)arginine synthase	Synthesis	RHEA	34755880
MMDBr0012954	Adenosine triphosphate	Argininosuccinic acid	Argininosuccinate synthase	Synthesis	RHEA	34755880
MMDBr0013150	alpha-Ketoglutarate	Carbon dioxide	Clavaminate synthase 1	Synthesis	RHEA	34755880
MMDBr0013333	Adenosine triphosphate	ADP	Protein ARG5,6, mitochondrial	Phosphorylation	RHEA	34755880
MMDBr0013416	L-Glutamic acid	Ornithine	Arginine biosynthesis bifunctional protein ArgJ	Acetylation; Synthesis	RHEA	34755880
MMDBr0013465	Geranyl diphosphate	(R)-linalool	R-linalool synthase	Synthesis	RHEA	34755880
MMDBr0013549	Adenosine monophosphate	Phosphoribosyl pyrophosphate	Adenine phosphoribosyltransferase	Transfer of a ribosyl group	RHEA	34755880
MMDBr0013567	alpha-Ketoglutarate	Carbon dioxide	Deacetoxycephalosporin C hydroxylase	Hydroxylation	RHEA	34755880
MMDBr0013601	Guanidinoproclavaminic acid	Proclavaminic acid	Proclavaminate amidinohydrolase	Hydrolysis of bond	RHEA	34755880
MMDBr0013717	alpha-Ketoglutarate	L-Glutamic acid	Acetylornithine aminotransferase	Amine group addition	RHEA	34755880
MMDBr0013735	Acetyl-CoA	(S)-malate(2-)	Malate synthase	Synthesis	RHEA	34755880
MMDBr0013920	alpha-Ketoglutarate	clavaminate	Clavaminate synthase 1	Synthesis	RHEA	34755880
MMDBr0013950	alpha-Ketoglutarate	Guanidinoproclavaminic acid	Clavaminate synthase 1	Synthesis	RHEA	34755880
MMDBr0013951	Isopenicillin N	penicillin N	Isopenicillin N epimerase	Epimerization	RHEA	34755880
MMDBr0014030	alpha-Ketoglutarate	Carbon dioxide	Deacetoxycephalosporin C synthase	Hydroxylation; Synthesis	RHEA	34755880
MMDBr0014081	alpha-Ketoglutarate	L-Allysine	L-lysine-epsilon aminotransferase	Amine group addition	RHEA	34755880
MMDBr0014117	N-Acetyl-L-glutamate 5-semialdehyde	Hydrogen Ion	Protein ARG5,6, mitochondrial	Reduction	RHEA	34755880
MMDBr0014207	N-[(5S)-5-ammonio-5-carboxylatopentanoyl]-L-cysteinyl-D-valinate	Water	Isopenicillin N synthase	Synthesis	RHEA	34755880
MMDBr0014360	Adenosine triphosphate	Adenosine monophosphate	Carboxyethyl-arginine beta-lactam-synthase	Synthesis	RHEA	34755880
MMDBr0014407	Argininosuccinic acid	fumarate	Bifunctional protein ArgHA	Non-hydrolytic bond cleavage (or its reversal)	RHEA	34755880
MMDBr0014436	Acetyl-CoA	CoA	Amino-acid acetyltransferase	Acetylation; Synthesis	RHEA	34755880
MMDBr0015100	Farnesyl pyrophosphate	(+)-T-muurolol	(+)-T-muurolol synthase ((2E,6E)-farnesyl diphosphate cyclizing)	Synthesis	RHEA	34755880
MMDBr0015101	Farnesyl pyrophosphate	(-)-delta-cadinene	(-)-delta-cadinene synthase	Synthesis	RHEA	34755880
MMDBr0015159	Geranyl diphosphate	Eucalyptol	1,8-cineole synthase	Synthesis	RHEA	34755880
MMDBr0016749	(13E)-labda-7,13-dien-15-yl diphosphate	diphosphate	Labda-7,13(16),14-triene synthase	Synthesis	RHEA	34755880
MMDBr0016756	(2E,6E,10E)-geranylgeranyl diphosphate	(13E)-labda-7,13-dien-15-yl diphosphate	Labda-7,13-dienyl diphosphate synthase	Synthesis	RHEA	34755880
MMDBr0016833	Water	Eucalyptol	1,8-cineole synthase	Synthesis	RHEA	34755880
MMDBr0016854	Farnesyl pyrophosphate	Nerolidol	R-linalool synthase	Synthesis	RHEA	34755880
MMDBr0017909	Adenosine triphosphate	Adenosine monophosphate	N-(5-amino-5-carboxypentanoyl)-L-cysteinyl-D-valine synthase	Synthesis	RHEA	34755880
MMDBr0024657	L-Cysteine	Hydrogen Ion	Putative thioredoxin reductase	Reduction	RHEA	34755880
MMDBr0024736	Water	L-Cysteine	Vitamin B12-dependent ribonucleoside-diphosphate reductase	Reduction	RHEA	34755880
MMDBr0026057	L-Cystine	L-Cysteine	Vitamin B12-dependent ribonucleoside-diphosphate reductase	Reduction	RHEA	34755880
MMDBr0026058	L-Cystine	L-Cysteine	Vitamin B12-dependent ribonucleoside-diphosphate reductase	Reduction	RHEA	34755880
MMDBr0026059	2'-Deoxyadenosine 5'-diphosphate	L-Cysteine	Vitamin B12-dependent ribonucleoside-diphosphate reductase	Reduction	RHEA	34755880
MMDBr0026060	L-Cystine	L-Cysteine	Vitamin B12-dependent ribonucleoside-diphosphate reductase	Reduction	RHEA	34755880

Genome Data

Genome Link

Not Available

Genome Length

Not Available

# Predicted Proteins

GenBank Sequence Modification Date

17-FEB-2022

MiMeDB Deposition Date

Reference

PMID: 17704766

Source Links

GenBank