| MMDBm0000374 | Aggregatibacter actinomycetemcomitans | Eubacteria | Proteobacteria | |
| MMDBm0028950 | Aspergillus niger | Fungi | Ascomycota | Aerobic |
| MMDBm0001248 | Bacillus subtilis | Eubacteria | Firmicutes | Facultative aerobe |
| MMDBm0001295 | Borreliella burgdorferi | Eubacteria | Spirochaetes | Microaerophilic |
| MMDBm0001322 | Buchnera aphidicola | Eubacteria | Proteobacteria | |
| MMDBm0001323 | Buchnera aphidicola | Eubacteria | Proteobacteria | |
| MMDBm0001324 | Buchnera aphidicola | Eubacteria | Proteobacteria | |
| MMDBm0001423 | Chlamydia muridarum | Eubacteria | Chlamydiae | |
| MMDBm0637965 | Chlamydia pneumoniae | Eubacteria | Chlamydiae | |
| MMDBm0001422 | Chlamydia trachomatis | Eubacteria | Chlamydiae | |
| MMDBm0097178 | Cyberlindnera jadinii | Fungi | Ascomycota | |
| MMDBm0001562 | Dickeya dadantii | Eubacteria | Proteobacteria | Facultative |
| MMDBm0542442 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0000162 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0541555 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0029062 | Aspergillus nidulans | Fungi | Ascomycota | Aerobic |
| MMDBm0159119 | Encephalitozoon cuniculi | Fungi | Microsporidia | |
| MMDBm0001654 | Gluconobacter oxydans | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001658 | Haemophilus influenzae | Eubacteria | Proteobacteria | Aerobe; facultative anaerobe |
| MMDBm0001686 | Helicobacter pylori | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001685 | Helicobacter pylori | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0098142 | Kluyveromyces lactis | Fungi | Ascomycota | |
| MMDBm0000417 | Leuconostoc mesenteroides | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0001888 | Mycobacterium smegmatis | Eubacteria | Actinobacteria | Aerobe |
| MMDBm0001960 | Nostoc punctiforme | Eubacteria | Cyanobacteria | Aerobe |
| MMDBm0001959 | Nostoc sp. PCC 7120 | Eubacteria | Cyanobacteria | Aerobe |
| MMDBm0002391 | Pseudomonas aeruginosa | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002538 | Sinorhizobium meliloti | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0101577 | Schizosaccharomyces pombe | Fungi | Ascomycota | |
| MMDBm0002585 | Streptococcus pneumoniae | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0002663 | Synechococcus elongatus | Eubacteria | Cyanobacteria | Facultative |
| MMDBm0882069 | Synechocystis sp. PCC 6803 | Eubacteria | | |
| MMDBm0001963 | Thermotoga maritima | Eubacteria | Thermotogae | Anaerobe |
| MMDBm0002723 | Treponema pallidum | Eubacteria | Spirochaetes | Anaerobe |
| MMDBm0098378 | Saccharomyces cerevisiae | Fungi | Ascomycota | |
| MMDBm0002045 | Zymomonas mobilis | Eubacteria | Proteobacteria | |
| MMDBm0001884 | Mycobacterium bovis | Eubacteria | Actinobacteria | Aerobe |
| MMDBm0001882 | Mycobacterium tuberculosis | Eubacteria | Actinobacteria | Aerobe |
| MMDBm0001880 | Mycobacterium tuberculosis | Eubacteria | Actinobacteria | Aerobe |
| MMDBm0001884 | Mycobacterium bovis | Eubacteria | Actinobacteria | Aerobe |
| MMDBm0001882 | Mycobacterium tuberculosis | Eubacteria | Actinobacteria | Aerobe |
| MMDBm0001880 | Mycobacterium tuberculosis | Eubacteria | Actinobacteria | Aerobe |
| MMDBm0101577 | Schizosaccharomyces pombe | Fungi | Ascomycota | |
| MMDBm0101577 | Schizosaccharomyces pombe | Fungi | Ascomycota | |