Reaction Identification
Reaction IDMMDBr0006924
Reaction typeNot Available
Sub-SystemLysine metabolism
In non-microbes0
In microbes236
Data SourcesVMH
Metabolism
PrecursorReactionProduct

Microbe IDOrganismKindgomPhylumOxygen preference
MMDBm0785739Abiotrophia defectivaEubacteriaFirmicutesFacultative anaerobe
MMDBm0001166Achromobacter xylosoxidansEubacteriaProteobacteriaAerobe
MMDBm0480821Achromobacter xylosoxidansEubacteriaProteobacteriaAerobe
MMDBm0000003AcidaminococcusEubacteriaFirmicutesAnaerobe
MMDBm0000004Acidaminococcus intestiniEubacteriaFirmicutesAnaerobe
MMDBm0808970Acidaminococcus intestiniEubacteriaFirmicutesAnaerobe
MMDBm0001188Acinetobacter baumanniiEubacteriaProteobacteriaAerobe
MMDBm0002164Acinetobacter pittiiEubacteriaProteobacteriaAerobe
MMDBm0000007Acinetobacter pittiiEubacteriaProteobacteriaAerobe
MMDBm0000008Acinetobacter radioresistensEubacteriaProteobacteriaAerobe
MMDBm0785760Aerococcus viridansEubacteriaFirmicutesFacultative anaerobe
MMDBm0516511Aeromonas caviaeEubacteriaProteobacteriaFacultative anaerobe
MMDBm0000010Aeromonas jandaeiEubacteriaProteobacteriaFacultative anaerobe
MMDBm0516564Aeromonas mediaEubacteriaProteobacteriaFacultative anaerobe
MMDBm0001199Aeromonas veroniiEubacteriaProteobacteriaAerobe
MMDBm0422692Afipia birgiaeEubacteriaProteobacteriaAerobe
MMDBm0000012Agrobacterium tumefaciensEubacteriaProteobacteriaAerobe
MMDBm0000016Alcaligenes faecalisEubacteriaProteobacteriaAerobe
MMDBm0481922Alcaligenes faecalisEubacteriaProteobacteriaAerobe
MMDBm0000018Alistipes finegoldiiEubacteriaBacteroidetesAnaerobe
MMDBm0394800Alistipes indistinctusEubacteriaBacteroidetesAnaerobe
MMDBm0810288Anaerococcus hydrogenalisEubacteriaFirmicutesObligate anaerobe
MMDBm0000020Anaerococcus prevotiiEubacteriaFirmicutesAnaerobe
MMDBm0802249Anaerostipes caccaeEubacteriaFirmicutesAnaerobe
MMDBm0802250Anaerostipes hadrusEubacteriaFirmicutesAnaerobe
MMDBm0676734Arthrobacter castelliEubacteriaActinobacteriaAerobe
MMDBm0001257Bacillus clausiiEubacteriaFirmicutesFacultative anaerobe
MMDBm0730456Bacillus fordiiEubacteriaFirmicutesAerobe
MMDBm0000028Bacillus haloduransEubacteriaFirmicutesFacultative aerobe
MMDBm0000032Bacillus timonensisEubacteriaFirmicutesFacultative anaerobe
MMDBm0647988Bifidobacterium angulatumEubacteriaActinobacteriaAnaerobe
MMDBm0000066Bifidobacterium bifidumEubacteriaActinobacteriaAnaerobe
MMDBm0648023Bifidobacterium bifidumEubacteriaActinobacteriaAnaerobe
MMDBm0000067Bifidobacterium bifidumEubacteriaActinobacteriaAnaerobe
MMDBm0000068Bifidobacterium bifidumEubacteriaActinobacteriaAnaerobe
MMDBm0648061Bifidobacterium catenulatumEubacteriaActinobacteriaAnaerobe
MMDBm0000079Bifidobacterium longumEubacteriaActinobacteriaAnaerobe
MMDBm0000087Bifidobacterium mongolienseEubacteriaActinobacteriaFacultative anaerobe
MMDBm0648137Bifidobacterium pseudocatenulatumEubacteriaActinobacteriaAnaerobe
MMDBm0648174Bifidobacterium thermacidophilumEubacteriaActinobacteriaAnaerobe
MMDBm0662671Candidatus Blastococcus massiliensisEubacteriaActinobacteriaAerobe
MMDBm0802304Blautia productaEubacteriaFirmicutesAnaerobe
MMDBm0482767Bordetella hinziiEubacteriaProteobacteriaAerobe
MMDBm0000095Bradyrhizobium elkaniiEubacteriaProteobacteriaAerobe
MMDBm0423522Bradyrhizobium japonicumEubacteriaProteobacteriaAerobe
MMDBm0766910Brevibacillus agriEubacteriaFirmicutesAerobe
MMDBm0766911Brevibacillus agriEubacteriaFirmicutesAerobe
MMDBm0000096Brevibacillus borstelensisEubacteriaFirmicutesAerobe
MMDBm0000097Brevibacillus brevisEubacteriaFirmicutesAerobe
MMDBm0663577Brevibacterium caseiEubacteriaActinobacteriaAerobe
MMDBm0663608Brevibacterium ravenspurgenseEubacteriaActinobacteriaAerobe
MMDBm0417443Brevundimonas bacteroidesEubacteriaProteobacteriaAerobe
MMDBm0417451Brevundimonas diminutaEubacteriaProteobacteriaAnaerobe
MMDBm0766462Brochothrix thermosphactaEubacteriaFirmicutesFacultative anaerobe
MMDBm0001144Burkholderiales bacterium 1_1_47EubacteriaProteobacteriaAnaerobe
MMDBm0798353Butyricicoccus pullicaecorumEubacteriaFirmicutesFacultative anaerobe
MMDBm0393350Butyricimonas synergisticaEubacteriaBacteroidetesAnaerobe
MMDBm0393353Butyricimonas virosaEubacteriaBacteroidetesAnaerobe
MMDBm0513907Campylobacter coliEubacteriaProteobacteriaMicroaerophile
MMDBm0001368Campylobacter jejuniEubacteriaProteobacteriaMicroaerophilic
MMDBm0514117Campylobacter jejuniEubacteriaProteobacteriaMicroaerophile
MMDBm0002282Campylobacter jejuniEubacteriaProteobacteriaMicroaerophile
MMDBm0001367Campylobacter jejuniEubacteriaProteobacteriaMicroaerophilic
MMDBm0514234Campylobacter upsaliensisEubacteriaProteobacteriaMicroaerophile
MMDBm0000882Cetobacterium someraeEubacteriaFusobacteriaAnaerobe
MMDBm0533444Citrobacter youngaeEubacteriaProteobacteriaFacultative anaerobe
MMDBm0000107Cloacibacillus evryensisEubacteriaSynergistetesAnaerobe
MMDBm0001146Clostridiales bacterium 1_7_47FAAEubacteriaFirmicutesObligate anaerobe
MMDBm0802699Enterocloster asparagiformisEubacteriaFirmicutesAnaerobe
MMDBm0805019Paraclostridium bifermentansEubacteriaFirmicutesObligate anaerobe
MMDBm0802705Enterocloster bolteaeEubacteriaFirmicutesAnaerobe
MMDBm0802708Enterocloster citroniaeEubacteriaFirmicutesAnaerobe
MMDBm0802089Hungateiclostridium clariflavumEubacteriaFirmicutes
MMDBm0000125Enterocloster clostridioformisEubacteriaFirmicutesAnaerobe
MMDBm0805202Terrisporobacter glycolicusEubacteriaFirmicutesObligate anaerobe
MMDBm0801127Hungatella hathewayiEubacteriaFirmicutesObligate anaerobe
MMDBm0801128Hungatella hathewayiEubacteriaFirmicutesObligate anaerobe
MMDBm0802892Clostridium hylemonaeEubacteriaFirmicutesAnaerobe
MMDBm0802992Lacrimispora indolisEubacteriaFirmicutesAnaerobe
MMDBm0808650Clostridium innocuumEubacteriaFirmicutesAnaerobe
MMDBm0802894Clostridium methoxybenzovoransEubacteriaFirmicutesAnaerobe
MMDBm0798898Clostridium paraputrificumEubacteriaFirmicutesAnaerobe
MMDBm0808655Clostridium saccharogumiaEubacteriaFirmicutesAnaerobe
MMDBm0802899Clostridium scindensEubacteriaFirmicutesAerotolerant
MMDBm0805008Paeniclostridium sordelliiEubacteriaFirmicutesObligate anaerobe
MMDBm0800078Clostridium sp. M62/1EubacteriaFirmicutesAnaerobe
MMDBm0800387Clostridium sp. SS2/1EubacteriaFirmicutesAnaerobe
MMDBm0001473Clostridium sticklandiiEubacteriaFirmicutesAnaerobe
MMDBm0802901Clostridium symbiosumEubacteriaFirmicutesAnaerobe
MMDBm0802903Clostridium symbiosumEubacteriaFirmicutesAnaerobe
MMDBm0724106Collinsella intestinalisEubacteriaActinobacteriaAnaerobe
MMDBm0724111Collinsella tanakaeiEubacteriaActinobacteriaAnaerobe
MMDBm0001480testosteroniEubacteriaProteobacteriaAerobe
MMDBm0000143Coprococcus catusEubacteriaFirmicutesAnaerobe
MMDBm0802609Coprococcus comesEubacteriaFirmicutesAnaerobe
MMDBm0648901Corynebacterium ammoniagenesEubacteriaActinobacteriaFacultative anaerobe
MMDBm0648904Corynebacterium amycolatumEubacteriaActinobacteriaFacultative anaerobe
MMDBm0001489Corynebacterium aurimucosumEubacteriaActinobacteriaFacultative aerobe
MMDBm0648978Corynebacterium durumEubacteriaActinobacteriaFacultative anaerobe
MMDBm0649002Corynebacterium glucuronolyticumEubacteriaActinobacteriaFacultative anaerobe
MMDBm0001490Corynebacterium kroppenstedtii5EubacteriaActinobacteriaFacultative aerobe
MMDBm0649080Corynebacterium propinquumEubacteriaActinobacteriaFacultative anaerobe
MMDBm0649119Corynebacterium striatumEubacteriaActinobacteriaFacultative anaerobe
MMDBm0649135Corynebacterium tuberculostearicumEubacteriaActinobacteriaFacultative anaerobe
MMDBm0002160Corynebacterium ulceransEubacteriaActinobacteriaFacultative anaerobe
MMDBm0649150Corynebacterium ureicelerivoransEubacteriaActinobacteriaFacultative anaerobe
MMDBm0667921Curtobacterium flaccumfaciensEubacteriaActinobacteriaAerobe
MMDBm0001529Delftia acidovoransEubacteriaProteobacteriaAerobe
MMDBm0809587Dialister succinatiphilusEubacteriaFirmicutesAnaerobe
MMDBm0649955Dietzia cinnameaEubacteriaActinobacteriaAerobe
MMDBm0000147Dorea formicigeneransEubacteriaFirmicutesAnaerobe
MMDBm0802657Dorea longicatenaEubacteriaFirmicutesAnaerobe
MMDBm0397638Dyadobacter beijingensisEubacteriaBacteroidetesAerobe
MMDBm0001564Dyadobacter fermentansEubacteriaBacteroidetesAerobe
MMDBm0553036Enterobacteriaceae bacterium 9_2_54FAAEubacteriaProteobacteriaAerobe
MMDBm0000688Enterococcus saccharolyticusEubacteriaFirmicutes
MMDBm0540120Escherichia albertiiEubacteriaProteobacteriaFacultative anaerobe
MMDBm0533123Atlantibacter hermanniiEubacteriaProteobacteriaFacultative anaerobe
MMDBm0802216Anaerobutyricum halliiEubacteriaFirmicutesObligate anaerobe
MMDBm0001104Anaerobutyricum halliiEubacteriaFirmicutes
MMDBm0000172Eubacterium limosumEubacteriaFirmicutesAnaerobe
MMDBm0806720Eubacterium sulciEubacteriaFirmicutesAnaerobe
MMDBm0784143Exiguobacterium aurantiacumEubacteriaFirmicutesFacultative anaerobe
MMDBm0805489Faecalibacterium prausnitziiEubacteriaFirmicutesObligate anaerobe
MMDBm0000180Faecalibacterium prausnitziiEubacteriaFirmicutesAnaerobe
MMDBm0805490Faecalibacterium prausnitziiEubacteriaFirmicutesAnaerobe
MMDBm0000181Faecalibacterium prausnitziiEubacteriaFirmicutesAnaerobe
MMDBm0002188Filifactor alocisEubacteriaFirmicutesAnaerobe
MMDBm0805538Flavonifractor plautiiEubacteriaFirmicutesFacultative anaerobe
MMDBm0416185Fusobacterium gonidiaformansEubacteriaFusobacteriaAnaerobe
MMDBm0416186Fusobacterium gonidiaformansEubacteriaFusobacteriaAnaerobe
MMDBm0416200Fusobacterium necrophorumEubacteriaFusobacteriaAnaerobe
MMDBm0416223Fusobacterium nucleatumEubacteriaFusobacteriaAnaerobe
MMDBm0416225Fusobacterium nucleatumEubacteriaFusobacteriaAnaerobe
MMDBm0416228Fusobacterium nucleatumEubacteriaFusobacteriaAnaerobe
MMDBm0000185Fusobacterium nucleatumEubacteriaFusobacteriaAnaerobe
MMDBm0416237Fusobacterium nucleatumEubacteriaFusobacteriaAnaerobe
MMDBm0416238Fusobacterium nucleatumEubacteriaFusobacteriaAnaerobe
MMDBm0416239Fusobacterium nucleatumEubacteriaFusobacteriaAnaerobe
MMDBm0416251Fusobacterium periodonticumEubacteriaFusobacteriaAnaerobe
MMDBm0416252Fusobacterium periodonticumEubacteriaFusobacteriaAnaerobe
MMDBm0416256Fusobacterium russiiEubacteriaFusobacteriaMicroaerophile
MMDBm0416224Fusobacterium nucleatumEubacteriaFusobacteriaAnaerobe
MMDBm0784091Gemella morbillorumEubacteriaFirmicutesFacultative anaerobe
MMDBm0650438Gordonia rubripertinctaEubacteriaActinobacteriaAerobe
MMDBm0786514Granulicatella elegansEubacteriaFirmicutesFacultative anaerobe
MMDBm0609478Grimontia hollisaeEubacteriaProteobacteriaFacultative anaerobe
MMDBm0557502Hafnia alveiEubacteriaProteobacteriaFacultative anaerobe
MMDBm0881919Halococcus morrhuaeNot AvailableEuryarchaeotaAerobe
MMDBm0515057Helicobacter cinaediEubacteriaProteobacteriaMicroaerophile
MMDBm0808774Kandleria vitulinaEubacteriaFirmicutesAnaerobe
MMDBm0682673Kocuria palustrisEubacteriaActinobacteriaAerobe
MMDBm0001156Lachnospiraceae bacterium 5_1_63FAAEubacteriaFirmicutesAnaerobe
MMDBm0792696Ligilactobacillus animalisEubacteriaFirmicutesFacultative anaerobe
MMDBm0792831Lactobacillus coryniformisEubacteriaFirmicutesFacultative anaerobe
MMDBm0001742Lactobacillus delbrueckiiEubacteriaFirmicutesFacultative anaerobe
MMDBm0793164Leuconostoc lactisEubacteriaFirmicutesFacultative anaerobe
MMDBm0793152Leuconostoc gelidumEubacteriaFirmicutesFacultative anaerobe
MMDBm0793161Leuconostoc lactisEubacteriaFirmicutesFacultative anaerobe
MMDBm0002107Megasphaera elsdeniiEubacteriaFirmicutesAnaerobe
MMDBm0001810Mesorhizobium japonicumEubacteriaProteobacteriaAerobe
MMDBm0435884Methylobacterium mesophilicumEubacteriaProteobacteriaAerobe
MMDBm0001859Methylobacterium populiEubacteriaProteobacteriaAerobe
MMDBm0001858Methylobacterium radiotolerans EubacteriaProteobacteriaAerobe
MMDBm0670563Microbacterium oleivoransEubacteriaActinobacteriaAerobe
MMDBm0670570Microbacterium paraoxydansEubacteriaActinobacteriaAerobe
MMDBm0001872Micrococcus luteusEubacteriaActinobacteriaAerobe
MMDBm0809111Mitsuokella jalaludiniiEubacteriaFirmicutesAnaerobe
MMDBm0809112Mitsuokella multacidaEubacteriaFirmicutesAnaerobe
MMDBm0001876Mobiluncus curtisiiEubacteriaActinobacteriaAnaerobe
MMDBm0557847Morganella morganiiEubacteriaProteobacteriaFacultative anaerobe
MMDBm0651046Mycobacterium aviumEubacteriaActinobacteriaMicroaerophile
MMDBm0657325Mycolicibacterium fortuitumEubacteriaActinobacteriaMicroaerophile
MMDBm0564358Nevskia ramosaEubacteriaProteobacteriaAnaerobe
MMDBm0000221Ochrobactrum anthropiEubacteriaProteobacteriaAerobe
MMDBm0000222Ochrobactrum intermediumEubacteriaProteobacteriaMicroaerophilic
MMDBm0723994Olsenella profusaEubacteriaActinobacteriaAnaerobe
MMDBm0803068Oribacterium sinusEubacteriaFirmicutesAnaerobe
MMDBm0000228Paenibacillus daejeonensisEubacteriaFirmicutesFacultative anaerobe
MMDBm0767965Paenibacillus lactisEubacteriaFirmicutesAerobe
MMDBm0555709Pantoea agglomeransEubacteriaProteobacteriaFacultative anaerobe
MMDBm0453897Paracoccus yeeiEubacteriaProteobacteriaAerobe
MMDBm0501221Parasutterella excrementihominisEubacteriaProteobacteriaFacultative anaerobe
MMDBm0810440Parvimonas micraEubacteriaFirmicutesAnaerobe
MMDBm0810479Peptoniphilus indolicusEubacteriaFirmicutesAnaerobe
MMDBm0810498Peptoniphilus timonensisEubacteriaFirmicutes
MMDBm0805074Peptostreptococcus anaerobiusEubacteriaFirmicutesAnaerobe
MMDBm0805078Peptostreptococcus stomatisEubacteriaFirmicutesAnaerobe
MMDBm0393954Prevotella disiensEubacteriaBacteroidetesAnaerobe
MMDBm0002383Propionibacterium acnesEubacteriaActinobacteriaAnaerobe
MMDBm0002385freudenreichiiEubacteriaActinobacteriaFacultative
MMDBm0692584Pseudopropionibacterium propionicumEubacteriaActinobacteriaFacultative anaerobe
MMDBm0558116Proteus mirabilisEubacteriaProteobacteriaFacultative anaerobe
MMDBm0558122Proteus penneriEubacteriaProteobacteriaFacultative anaerobe
MMDBm0558544Providencia rettgeriEubacteriaProteobacteriaFacultative anaerobe
MMDBm0580236Pseudomonas oleovoransEubacteriaProteobacteriaAerobe
MMDBm0645329Pyramidobacter piscolensEubacteriaSynergistetesAnaerobe
MMDBm0000337Ralstonia pickettiiEubacteriaProteobacteria
MMDBm0547370Raoultella planticolaEubacteriaProteobacteriaFacultative anaerobe
MMDBm0658815Rhodococcus hoagiiEubacteriaActinobacteriaAerobe
MMDBm0658861Rhodococcus rhodochrousEubacteriaActinobacteriaAerobe
MMDBm0000257Roseburia hominisEubacteriaFirmicutesAnaerobe
MMDBm0461764Roseomonas mucosaEubacteriaProteobacteriaFacultative anaerobe
MMDBm0397948Rudanella luteaEubacteriaBacteroidetesAerobe
MMDBm0001136Ruminococcaceae bacterium D16EubacteriaFirmicutesObligate anaerobe
MMDBm0000265Ruminococcus sp. SR1/5EubacteriaFirmicutesObligate anaerobe
MMDBm0000266Ruminococcus torquesEubacteriaFirmicutesAnaerobe
MMDBm0648739Scardovia inopinataEubacteriaActinobacteriaAnaerobe
MMDBm0639412Schlesneria paludicolaEubacteriaPlanctomycetesFacultative anaerobe
MMDBm0809204Selenomonas ruminantiumEubacteriaFirmicutesAnaerobe
MMDBm0626640Silanimonas lentaEubacteriaProteobacteriaAerobe
MMDBm0724468Slackia exiguaEubacteriaActinobacteriaAnaerobe
MMDBm0724473Slackia piriformisEubacteriaActinobacteriaAnaerobe
MMDBm0471855Sphingomonas paucimobilisEubacteriaProteobacteria
MMDBm0002553Spirosoma lingualeEubacteriaBacteroidetesAerobe
MMDBm0774772Staphylococcus arlettaeEubacteriaFirmicutesFacultative anaerobe
MMDBm0626730Stenotrophomonas rhizophilaEubacteriaProteobacteriaAnaerobe
MMDBm0000269Candidatus Stoquefichus massiliensisEubacteriaFirmicutes
MMDBm0519718Succinivibrio dextrinosolvensEubacteriaProteobacteriaFacultative anaerobe
MMDBm0002641Sulfolobus solfataricusNot AvailableCrenarchaeotaAerobe
MMDBm0501236Sutterella parvirubraEubacteriaProteobacteriaFacultative anaerobe
MMDBm0501242Sutterella wadsworthensisEubacteriaProteobacteriaMicroaerophile/ anaerobe
MMDBm0557387Tatumella ptyseosEubacteriaProteobacteriaFacultative anaerobe
MMDBm0646445Trueperella pyogenesEubacteriaActinobacteriaFacultative anaerobe
MMDBm0774233Ureibacillus thermosphaericusEubacteriaFirmicutesAerobe
MMDBm0646461Varibaculum cambrienseEubacteriaActinobacteriaFacultative anaerobe
MMDBm0610806Vibrio fluvialisEubacteriaProteobacteriaAerobe
MMDBm0610808Vibrio fluvialisEubacteriaProteobacteriaAerobe
MMDBm0610810Vibrio fluvialisEubacteriaProteobacteriaAerobe
MMDBm0793461Weissella cibariaEubacteriaFirmicutesFacultative anaerobe
MMDBm0793464Weissella confusaEubacteriaFirmicutesFacultative anaerobe
MMDBm0000767Bacillus pseudofirmusEubacteriaFirmicutesFacultative aerobe
MMDBm0546994Kluyvera ascorbataEubacteriaProteobacteriaFacultative anaerobe
MMDBm0658814Rhodococcus hoagiiEubacteriaActinobacteria
MMDBm0670509Microbacterium gubbeenenseEubacteriaActinobacteriaFacultative anaerobe
MMDBm0772876Kurthia massiliensisEubacteriaFirmicutesAerobe