| MMDBm0001166 | Achromobacter xylosoxidans | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0480821 | Achromobacter xylosoxidans | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001191 | Actinobacillus pleuropneumoniae | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0000009 | Adlercreutzia equolifaciens | Eubacteria | Actinobacteria | Anaerobe |
| MMDBm0422692 | Afipia birgiae | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0000011 | Aggregatibacter aphrophilus | Eubacteria | Proteobacteria | Facultative |
| MMDBm0766846 | Aneurinibacillus aneurinilyticus | Eubacteria | Firmicutes | Aerobe |
| MMDBm0000023 | Arcobacter butzleri | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0676734 | Arthrobacter castelli | Eubacteria | Actinobacteria | Aerobe |
| MMDBm0000024 | Bacillus altitudinis | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0001257 | Bacillus clausii | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0730439 | Bacillus endophyticus | Eubacteria | Firmicutes | Aerobe |
| MMDBm0000028 | Bacillus halodurans | Eubacteria | Firmicutes | Facultative aerobe |
| MMDBm0730482 | Bacillus infantis | Eubacteria | Firmicutes | Aerobe |
| MMDBm0730533 | Bacillus nealsonii | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0000032 | Bacillus timonensis | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0514239 | Campylobacter ureolyticus | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0647984 | Bifidobacterium adolescentis | Eubacteria | Actinobacteria | Anaerobe |
| MMDBm0482767 | Bordetella hinzii | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0000095 | Bradyrhizobium elkanii | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0423522 | Bradyrhizobium japonicum | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0766910 | Brevibacillus agri | Eubacteria | Firmicutes | Aerobe |
| MMDBm0766911 | Brevibacillus agri | Eubacteria | Firmicutes | Aerobe |
| MMDBm0000096 | Brevibacillus borstelensis | Eubacteria | Firmicutes | Aerobe |
| MMDBm0000097 | Brevibacillus brevis | Eubacteria | Firmicutes | Aerobe |
| MMDBm0663594 | Brevibacterium linens | Eubacteria | Actinobacteria | Aerobe |
| MMDBm0483496 | Burkholderia cepacia | Eubacteria | Proteobacteria | Microaerophile |
| MMDBm0001371 | Campylobacter concisus | Eubacteria | Proteobacteria | Microaerophilic |
| MMDBm0001370 | Campylobacter curvus | Eubacteria | Proteobacteria | Microaerophilic |
| MMDBm0000100 | Campylobacter fetus | Eubacteria | Proteobacteria | Microaerophilic |
| MMDBm0513982 | Campylobacter gracilis | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0000101 | Campylobacter hominis | Eubacteria | Proteobacteria | Anaerobe |
| MMDBm0513988 | Campylobacter hyointestinalis | Eubacteria | Proteobacteria | Microaerophile |
| MMDBm0001373 | Campylobacter lari | Eubacteria | Proteobacteria | Microaerophilic |
| MMDBm0514216 | Campylobacter rectus | Eubacteria | Proteobacteria | Microaerophile |
| MMDBm0514218 | Campylobacter showae | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0514234 | Campylobacter upsaliensis | Eubacteria | Proteobacteria | Microaerophile |
| MMDBm0881918 | Candidatus Nitrososphaera gargensis | Not Available | Thaumarchaeota | Aerobe |
| MMDBm0000107 | Cloacibacillus evryensis | Eubacteria | Synergistetes | Anaerobe |
| MMDBm0001146 | Clostridiales bacterium 1_7_47FAA | Eubacteria | Firmicutes | Obligate anaerobe |
| MMDBm0808655 | Clostridium saccharogumia | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0802901 | Clostridium symbiosum | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0648901 | Corynebacterium ammoniagenes | Eubacteria | Actinobacteria | Facultative anaerobe |
| MMDBm0649002 | Corynebacterium glucuronolyticum | Eubacteria | Actinobacteria | Facultative anaerobe |
| MMDBm0001490 | Corynebacterium kroppenstedtii5 | Eubacteria | Actinobacteria | Facultative aerobe |
| MMDBm0649135 | Corynebacterium tuberculostearicum | Eubacteria | Actinobacteria | Facultative anaerobe |
| MMDBm0001503 | Cryptobacterium curtum | Eubacteria | Actinobacteria | Anaerobe |
| MMDBm0665710 | Dermacoccus nishinomiyaensis | Eubacteria | Actinobacteria | Aerobe |
| MMDBm0397638 | Dyadobacter beijingensis | Eubacteria | Bacteroidetes | Aerobe |
| MMDBm0001564 | Dyadobacter fermentans | Eubacteria | Bacteroidetes | Aerobe |
| MMDBm0503548 | Eikenella corrodens | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0553036 | Enterobacteriaceae bacterium 9_2_54FAA | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0784143 | Exiguobacterium aurantiacum | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0784091 | Gemella morbillorum | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0557502 | Hafnia alvei | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0544527 | Klebsiella pneumoniae | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0881919 | Halococcus morrhuae | Not Available | Euryarchaeota | Aerobe |
| MMDBm0515049 | Helicobacter canadensis | Eubacteria | Proteobacteria | Microaerophile |
| MMDBm0515057 | Helicobacter cinaedi | Eubacteria | Proteobacteria | Microaerophile |
| MMDBm0515086 | Helicobacter pullorum | Eubacteria | Proteobacteria | Microaerophile |
| MMDBm0515554 | Helicobacter winghamensis | Eubacteria | Proteobacteria | Microaerophile |
| MMDBm0810781 | Kallipyga massiliensis | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0503626 | Kingella oralis | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0682673 | Kocuria palustris | Eubacteria | Actinobacteria | Aerobe |
| MMDBm0001729 | Kocuria rhizophila | Eubacteria | Actinobacteria | Aerobe |
| MMDBm0001732 | Kytococcus sedentarius | Eubacteria | Actinobacteria | Aerobe |
| MMDBm0001158 | Lachnospiraceae bacterium 8_1_57FAA | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0491302 | Lautropia mirabilis | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0533093 | Leminorella grimontii | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0793161 | Leuconostoc lactis | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0001794 | Lysinibacillus sphaericus | Eubacteria | Firmicutes | Aerobe |
| MMDBm0803001 | Marvinbryantia formatexigens | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0001810 | Mesorhizobium japonicum | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0670570 | Microbacterium paraoxydans | Eubacteria | Actinobacteria | Aerobe |
| MMDBm0001872 | Micrococcus luteus | Eubacteria | Actinobacteria | Aerobe |
| MMDBm0000002 | Micromonospora aurantiaca | Eubacteria | Actinobacteria | Aerobe |
| MMDBm0001878 | Moraxella catarrhalis | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0651046 | Mycobacterium avium | Eubacteria | Actinobacteria | Microaerophile |
| MMDBm0657325 | Mycolicibacterium fortuitum | Eubacteria | Actinobacteria | Microaerophile |
| MMDBm0002052 | Mycoplasma hominis | Eubacteria | Tenericutes | Anaerobe |
| MMDBm0815005 | Mycoplasma pneumoniae | Eubacteria | Tenericutes | Anaerobe |
| MMDBm0503661 | Neisseria cinerea | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0503667 | Neisseria elongata | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0503672 | Neisseria flavescens | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0503763 | Neisseria macacae | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0503982 | Neisseria mucosa | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0503999 | Neisseria subflava | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0764325 | Oceanobacillus picturae | Eubacteria | Firmicutes | |
| MMDBm0453897 | Paracoccus yeei | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0563066 | Plesiomonas shigelloides | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0558116 | Proteus mirabilis | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0558122 | Proteus penneri | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0580255 | Pseudomonas alcaliphila | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0580236 | Pseudomonas oleovorans | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0000337 | Ralstonia pickettii | Eubacteria | Proteobacteria | |
| MMDBm0461764 | Roseomonas mucosa | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0397948 | Rudanella lutea | Eubacteria | Bacteroidetes | Aerobe |
| MMDBm0639412 | Schlesneria paludicola | Eubacteria | Planctomycetes | Facultative anaerobe |
| MMDBm0626640 | Silanimonas lenta | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0724468 | Slackia exigua | Eubacteria | Actinobacteria | Anaerobe |
| MMDBm0724473 | Slackia piriformis | Eubacteria | Actinobacteria | Anaerobe |
| MMDBm0471855 | Sphingomonas paucimobilis | Eubacteria | Proteobacteria | |
| MMDBm0002553 | Spirosoma linguale | Eubacteria | Bacteroidetes | Aerobe |
| MMDBm0779569 | Staphylococcus pettenkoferi | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0774633 | Mammaliicoccus vitulinus | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0000269 | Candidatus Stoquefichus massiliensis | Eubacteria | Firmicutes | |
| MMDBm0002641 | Sulfolobus solfataricus | Not Available | Crenarchaeota | Aerobe |
| MMDBm0501236 | Sutterella parvirubra | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0501242 | Sutterella wadsworthensis | Eubacteria | Proteobacteria | Microaerophile/ anaerobe |
| MMDBm0552405 | Trabulsiella guamensis | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001976 | Tropheryma whipplei | Eubacteria | Actinobacteria | Aerobe |
| MMDBm0815377 | Ureaplasma parvum | Eubacteria | Tenericutes | Facultative anaerobe |
| MMDBm0815403 | Ureaplasma urealyticum | Eubacteria | Tenericutes | Facultative anaerobe |
| MMDBm0774233 | Ureibacillus thermosphaericus | Eubacteria | Firmicutes | Aerobe |
| MMDBm0562388 | Yersinia bercovieri | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002781 | Yersinia enterocolitica | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0562450 | Yersinia kristensenii | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002785 | pseudotuberculosis | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0562754 | Yersinia rohdei | Eubacteria | Proteobacteria | Obligate anaerobe |
| MMDBm0552432 | Yokenella regensburgei | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0000767 | Bacillus pseudofirmus | Eubacteria | Firmicutes | Facultative aerobe |
| MMDBm0670509 | Microbacterium gubbeenense | Eubacteria | Actinobacteria | Facultative anaerobe |
