Reaction Identification
Reaction IDMMDBr0008511
Reaction typeNot Available
Sub-SystemCitric acid cycle
In non-microbes0
In microbes202
Data SourcesVMH
Metabolism
PrecursorReactionProduct

Microbe IDOrganismKindgomPhylumOxygen preference
MMDBm0001191Actinobacillus pleuropneumoniaeEubacteriaProteobacteriaFacultative anaerobe
MMDBm0516511Aeromonas caviaeEubacteriaProteobacteriaFacultative anaerobe
MMDBm0001198Aeromonas hydrophilaEubacteriaProteobacteriaFacultative aerobe
MMDBm0000010Aeromonas jandaeiEubacteriaProteobacteriaFacultative anaerobe
MMDBm0516564Aeromonas mediaEubacteriaProteobacteriaFacultative anaerobe
MMDBm0001199Aeromonas veroniiEubacteriaProteobacteriaAerobe
MMDBm0422692Afipia birgiaeEubacteriaProteobacteriaAerobe
MMDBm0000011Aggregatibacter aphrophilusEubacteriaProteobacteriaFacultative
MMDBm0000016Alcaligenes faecalisEubacteriaProteobacteriaAerobe
MMDBm0481922Alcaligenes faecalisEubacteriaProteobacteriaAerobe
MMDBm0000018Alistipes finegoldiiEubacteriaBacteroidetesAnaerobe
MMDBm0000019Alistipes shahiiEubacteriaBacteroidetesAnaerobe
MMDBm0723927Atopobium minutumEubacteriaActinobacteriaAnaerobe
MMDBm0001243Atopobium parvulumEubacteriaActinobacteriaAnaerobe
MMDBm0723989Lancefieldella rimaeEubacteriaActinobacteriaAnaerobe
MMDBm0001264Bacillus cereusEubacteriaFirmicutesAerobe
MMDBm0730452Bacillus flexusEubacteriaFirmicutesAerobe
MMDBm0730482Bacillus infantisEubacteriaFirmicutesAerobe
MMDBm0001269Bacillus megateriumEubacteriaFirmicutesAerobe
MMDBm0730186Bacillus thuringiensisEubacteriaFirmicutesFacultative anaerobe
MMDBm0000039Bacteroides clarusEubacteriaBacteroidetesAnaerobe
MMDBm0392101Bacteroides fluxusEubacteriaBacteroidetesAnaerobe
MMDBm0000064Bifidobacterium adolescentisEubacteriaActinobacteriaAnaerobe
MMDBm0647988Bifidobacterium angulatumEubacteriaActinobacteriaAnaerobe
MMDBm0001287Bifidobacterium animalisEubacteriaActinobacteriaAnaerobe
MMDBm0002290Bifidobacterium animalisEubacteriaActinobacteriaAnaerobe
MMDBm0648002Bifidobacterium animalisEubacteriaActinobacteriaAnaerobe
MMDBm0001288Bifidobacterium animalisEubacteriaActinobacteriaAnaerobe
MMDBm0002230Bifidobacterium animalisEubacteriaActinobacteriaAnaerobe
MMDBm0001289Bifidobacterium animalisEubacteriaActinobacteriaAnaerobe
MMDBm0002078Bifidobacterium animalisEubacteriaActinobacteriaAnaerobe
MMDBm0000066Bifidobacterium bifidumEubacteriaActinobacteriaAnaerobe
MMDBm0648023Bifidobacterium bifidumEubacteriaActinobacteriaAnaerobe
MMDBm0000067Bifidobacterium bifidumEubacteriaActinobacteriaAnaerobe
MMDBm0000068Bifidobacterium bifidumEubacteriaActinobacteriaAnaerobe
MMDBm0648041Bifidobacterium breveEubacteriaActinobacteriaAnaerobe
MMDBm0648061Bifidobacterium catenulatumEubacteriaActinobacteriaAnaerobe
MMDBm0648069Bifidobacterium coryneformeEubacteriaActinobacteriaAnaerobe
MMDBm0648074Bifidobacterium dentiumEubacteriaActinobacteriaAnaerobe
MMDBm0648082Bifidobacterium gallicumEubacteriaActinobacteriaAnaerobe
MMDBm0000072Bifidobacterium catenulatumEubacteriaActinobacteriaAnaerobe
MMDBm0000075Bifidobacterium longumEubacteriaActinobacteriaAnaerobe
MMDBm0648095Bifidobacterium longumEubacteriaActinobacteriaAnaerobe
MMDBm0000078Bifidobacterium longumEubacteriaActinobacteriaAnaerobe
MMDBm0000079Bifidobacterium longumEubacteriaActinobacteriaAnaerobe
MMDBm0648107Bifidobacterium longumEubacteriaActinobacteriaAnaerobe
MMDBm0000081Bifidobacterium longumEubacteriaActinobacteriaAnaerobe
MMDBm0648097Bifidobacterium longumEubacteriaActinobacteriaAnaerobe
MMDBm0000084Bifidobacterium longumEubacteriaActinobacteriaAnaerobe
MMDBm0000085Bifidobacterium longumEubacteriaActinobacteriaAnaerobe
MMDBm0000076Bifidobacterium longumEubacteriaActinobacteriaAnaerobe
MMDBm0000087Bifidobacterium mongolienseEubacteriaActinobacteriaFacultative anaerobe
MMDBm0648137Bifidobacterium pseudocatenulatumEubacteriaActinobacteriaAnaerobe
MMDBm0648159Bifidobacterium ruminantiumEubacteriaActinobacteriaAnaerobe
MMDBm0647984Bifidobacterium adolescentisEubacteriaActinobacteriaAnaerobe
MMDBm0648174Bifidobacterium thermacidophilumEubacteriaActinobacteriaAnaerobe
MMDBm0000095Bradyrhizobium elkaniiEubacteriaProteobacteriaAerobe
MMDBm0423522Bradyrhizobium japonicumEubacteriaProteobacteriaAerobe
MMDBm0533363Cedecea davisaeEubacteriaProteobacteriaAerobe
MMDBm0533412Citrobacter amalonaticusEubacteriaProteobacteriaFacultative anaerobe
MMDBm0000105Citrobacter freundiiEubacteriaProteobacteriaFacultative anaerobe
MMDBm0533435Citrobacter freundiiEubacteriaProteobacteriaFacultative anaerobe
MMDBm0001450Citrobacter koseriEubacteriaProteobacteriaFacultatively anaerobe
MMDBm0533439Citrobacter portucalensisEubacteriaProteobacteria
MMDBm0533444Citrobacter youngaeEubacteriaProteobacteriaFacultative anaerobe
MMDBm0798796Clostridium celatumEubacteriaFirmicutesAnaerobe
MMDBm0000132Clostridium perfringensEubacteriaFirmicutesAnaerobe
MMDBm0724102Collinsella aerofaciensEubacteriaActinobacteriaAnaerobe
MMDBm0724106Collinsella intestinalisEubacteriaActinobacteriaAnaerobe
MMDBm0724109Collinsella stercorisEubacteriaActinobacteriaAnaerobe
MMDBm0724111Collinsella tanakaeiEubacteriaActinobacteriaAnaerobe
MMDBm0001501Cronobacter sakazakiiEubacteriaProteobacteriaAnaerobe
MMDBm0000148Dysgonomonas gadeiEubacteriaBacteroidetesFacultative anaerobe
MMDBm0557462Edwardsiella tardaEubacteriaProteobacteriaFacultative anaerobe
MMDBm0002181Edwardsiella tardaEubacteriaProteobacteriaFacultative anaerobe
MMDBm0000150Eggerthella lentaEubacteriaActinobacteriaAnaerobe
MMDBm0724384Eggerthella sp. 1_3_56FAAEubacteriaActinobacteriaNanaerobe
MMDBm0000151Eggerthella sp. YY7918EubacteriaActinobacteriaNanaerobe
MMDBm0000194Klebsiella aerogenesEubacteriaProteobacteriaFacultative anaerobe
MMDBm0001574Enterobacter asburiaeEubacteriaProteobacteriaFacultative anaerobe
MMDBm0534723Enterobacter cancerogenusEubacteriaProteobacteriaFacultative anaerobe
MMDBm0534735Enterobacter cloacaeEubacteriaProteobacteriaFacultative anaerobe
MMDBm0534800Enterobacter hormaecheiEubacteriaProteobacteriaFacultative anaerobe
MMDBm0534801Enterobacter hormaecheiEubacteriaProteobacteriaFacultative anaerobe
MMDBm0553036Enterobacteriaceae bacterium 9_2_54FAAEubacteriaProteobacteriaAerobe
MMDBm0786754Enterococcus cecorumEubacteriaFirmicutesFacultative anaerobe
MMDBm0540120Escherichia albertiiEubacteriaProteobacteriaFacultative anaerobe
MMDBm0540122Escherichia albertiiEubacteriaProteobacteriaFacultative anaerobe
MMDBm0001584Escherichia coliEubacteriaProteobacteriaFacultative anaerobe
MMDBm0001593Escherichia coliEubacteriaProteobacteriaFacultative anaerobe
MMDBm0001583Escherichia coliEubacteriaProteobacteriaFacultative anaerobe
MMDBm0001596Escherichia fergusoniiEubacteriaProteobacteriaAerobe
MMDBm0533123Atlantibacter hermanniiEubacteriaProteobacteriaFacultative anaerobe
MMDBm0543470Escherichia sp. 1_1_43EubacteriaProteobacteriaFacultative anaerobe
MMDBm0000160Escherichia coliEubacteriaProteobacteriaFacultative anaerobe
MMDBm0543506Escherichia sp. 4_1_40BEubacteriaProteobacteriaFacultative anaerobe
MMDBm0801642Eubacterium cellulosolvensEubacteriaFirmicutesAnaerobe
MMDBm0609478Grimontia hollisaeEubacteriaProteobacteriaFacultative anaerobe
MMDBm0570882Haemophilus haemolyticusEubacteriaProteobacteriaFacultative anaerobe
MMDBm0002186Haemophilus influenzaeEubacteriaProteobacteriaFacultative anaerobe
MMDBm0000190Haemophilus parainfluenzaeEubacteriaProteobacteriaAerobe; facultative anaerobe
MMDBm0557502Hafnia alveiEubacteriaProteobacteriaFacultative anaerobe
MMDBm0544527Klebsiella pneumoniaeEubacteriaProteobacteriaFacultative anaerobe
MMDBm0544444Klebsiella michiganensisEubacteriaProteobacteriaFacultative anaerobe
MMDBm0544716Klebsiella pneumoniaeEubacteriaProteobacteriaFacultative anaerobe
MMDBm0001067Klebsiella variicolaEubacteriaProteobacteria
MMDBm0790420Lactobacillus acidophilusEubacteriaFirmicutesFacultative anaerobe
MMDBm0001737Lactobacillus acidophilusEubacteriaFirmicutesAnaerobe; microaerophile
MMDBm0001756Lactobacillus amylolyticusEubacteriaFirmicutesAnaerobe
MMDBm0001740brevisEubacteriaFirmicutesFacultative anaerobe
MMDBm0790456Lactobacillus crispatusEubacteriaFirmicutesFacultative anaerobe
MMDBm0001739Lactobacillus delbrueckiiEubacteriaFirmicutesFacultative anaerobe
MMDBm0001742Lactobacillus delbrueckiiEubacteriaFirmicutesFacultative anaerobe
MMDBm0001743Lactobacillus gasseriEubacteriaFirmicutesFacultative anaerobe
MMDBm0001745Lactobacillus helveticusEubacteriaFirmicutesFacultative anaerobe
MMDBm0790533Lactobacillus helveticusEubacteriaFirmicutesFacultative anaerobe
MMDBm0002092Lactobacillus johnsoniiEubacteriaFirmicutesFacultative anaerobe
MMDBm0001735Lactobacillus johnsoniiEubacteriaFirmicutesFacultative anaerobe
MMDBm0790617Lactobacillus ultunensisEubacteriaFirmicutesFacultative anaerobe
MMDBm0001766Laribacter hongkongensisEubacteriaProteobacteriaAnaerobe
MMDBm0533093Leminorella grimontiiEubacteriaProteobacteriaFacultative anaerobe
MMDBm0001779Leptotrichia buccalisEubacteriaFusobacteriaAnaerobe
MMDBm0001810Mesorhizobium japonicumEubacteriaProteobacteriaAerobe
MMDBm0435884Methylobacterium mesophilicumEubacteriaProteobacteriaAerobe
MMDBm0001859Methylobacterium populiEubacteriaProteobacteriaAerobe
MMDBm0001858Methylobacterium radiotolerans EubacteriaProteobacteriaAerobe
MMDBm0557847Morganella morganiiEubacteriaProteobacteriaFacultative anaerobe
MMDBm0564358Nevskia ramosaEubacteriaProteobacteriaAnaerobe
MMDBm0000221Ochrobactrum anthropiEubacteriaProteobacteriaAerobe
MMDBm0000222Ochrobactrum intermediumEubacteriaProteobacteriaMicroaerophilic
MMDBm0723994Olsenella profusaEubacteriaActinobacteriaAnaerobe
MMDBm0002330Olsenella uliEubacteriaActinobacteriaAnaerobe
MMDBm0000226Paenibacillus alveiEubacteriaFirmicutesFacultative anaerobe
MMDBm0555709Pantoea agglomeransEubacteriaProteobacteriaFacultative anaerobe
MMDBm0393900Paraprevotella claraEubacteriaBacteroidetesAnaerobe
MMDBm0393901Paraprevotella xylaniphilaEubacteriaBacteroidetesAnaerobe
MMDBm0563066Plesiomonas shigelloidesEubacteriaProteobacteriaAerobe
MMDBm0393934Prevotella buccaeEubacteriaBacteroidetesAnaerobe
MMDBm0558116Proteus mirabilisEubacteriaProteobacteriaFacultative anaerobe
MMDBm0558122Proteus penneriEubacteriaProteobacteriaFacultative anaerobe
MMDBm0558527Providencia alcalifaciensEubacteriaProteobacteriaFacultative anaerobe
MMDBm0558544Providencia rettgeriEubacteriaProteobacteriaFacultative anaerobe
MMDBm0558546Providencia rustigianiiEubacteriaProteobacteriaFacultative anaerobe
MMDBm0558550Providencia stuartiiEubacteriaProteobacteriaFacultative anaerobe
MMDBm0580104Pseudomonas aeruginosaEubacteriaProteobacteriaAerobe
MMDBm0580255Pseudomonas alcaliphilaEubacteriaProteobacteriaAerobe
MMDBm0002397Pseudomonas fluorescensEubacteriaProteobacteriaAerobe
MMDBm0580585Pseudomonas monteiliiEubacteriaProteobacteriaAerobe
MMDBm0580586Pseudomonas monteiliiEubacteriaProteobacteriaAerobe
MMDBm0580229Pseudomonas nitroreducensEubacteriaProteobacteriaAerobe
MMDBm0580236Pseudomonas oleovoransEubacteriaProteobacteriaAerobe
MMDBm0002403Pseudomonas putidaEubacteriaProteobacteriaAerobe
MMDBm0002086Pseudomonas stutzeriEubacteriaProteobacteriaAerobe
MMDBm0547370Raoultella planticolaEubacteriaProteobacteriaFacultative anaerobe
MMDBm0461764Roseomonas mucosaEubacteriaProteobacteriaFacultative anaerobe
MMDBm0803018Ruminococcus lactarisEubacteriaFirmicutesAnaerobe
MMDBm0002492Salmonella entericaEubacteriaProteobacteriaFacultative anaerobe
MMDBm0639412Schlesneria paludicolaEubacteriaPlanctomycetesFacultative anaerobe
MMDBm0559624Chania multitudinisentensEubacteriaProteobacteriaFacultative anaerobe
MMDBm0560531Serratia liquefaciensEubacteriaProteobacteriaFacultative anaerobe
MMDBm0560533Serratia marcescensEubacteriaProteobacteriaFacultative anaerobe
MMDBm0002532Shigella dysenteriaeEubacteriaProteobacteriaFacultative anaerobe
MMDBm0002232Shigella flexneriEubacteriaProteobacteriaFacultative anaerobe
MMDBm0002531Shigella sonneiEubacteriaProteobacteriaFacultative anaerobe
MMDBm0471855Sphingomonas paucimobilisEubacteriaProteobacteria
MMDBm0779406Staphylococcus cohniiEubacteriaFirmicutesFacultative anaerobe
MMDBm0779545Staphylococcus intermediusEubacteriaFirmicutes
MMDBm0794401Streptococcus anginosusEubacteriaFirmicutesFacultative anaerobe
MMDBm0794415Streptococcus constellatusEubacteriaFirmicutesFacultative anaerobe
MMDBm0794420Streptococcus constellatusEubacteriaFirmicutesFacultative anaerobe
MMDBm0794454Streptococcus cristatusEubacteriaFirmicutesFacultative anaerobe
MMDBm0794502Streptococcus equinusEubacteriaFirmicutesFacultative anaerobe
MMDBm0002252Streptococcus gallolyticusEubacteriaFirmicutesFacultative anaerobe
MMDBm0002607Streptococcus gordoniiEubacteriaFirmicutesFacultative anaerobe
MMDBm0794537Streptococcus infantariusEubacteriaFirmicutesFacultative anaerobe
MMDBm0794428Streptococcus intermediusEubacteriaFirmicutesFacultative anaerobe
MMDBm0794553Streptococcus lutetiensisEubacteriaFirmicutesFacultative anaerobe
MMDBm0794617Streptococcus mutansEubacteriaFirmicutesFacultative anaerobe
MMDBm0002632Streptococcus parauberisEubacteriaFirmicutesFacultative anaerobe
MMDBm0796207Streptococcus thoraltensisEubacteriaFirmicutesAnaerobe
MMDBm0002614Streptococcus uberisEubacteriaFirmicutesFacultative anaerobe
MMDBm0395050Tannerella forsythiaEubacteriaBacteroidetesAnaerobe
MMDBm0557387Tatumella ptyseosEubacteriaProteobacteriaFacultative anaerobe
MMDBm0552405Trabulsiella guamensisEubacteriaProteobacteriaFacultative anaerobe
MMDBm0610806Vibrio fluvialisEubacteriaProteobacteriaAerobe
MMDBm0610808Vibrio fluvialisEubacteriaProteobacteriaAerobe
MMDBm0610810Vibrio fluvialisEubacteriaProteobacteriaAerobe
MMDBm0002190Vibrio furnissiiEubacteriaProteobacteriaFacultative anaerobe
MMDBm0000288Vibrio mimicusEubacteriaProteobacteriaFacultative anaerobe
MMDBm0002741Vibrio parahaemolyticusEubacteriaProteobacteriaFacultative anaerobe
MMDBm0562388Yersinia bercovieriEubacteriaProteobacteriaFacultative anaerobe
MMDBm0002781Yersinia enterocoliticaEubacteriaProteobacteriaFacultative anaerobe
MMDBm0562438Yersinia frederikseniiEubacteriaProteobacteriaFacultative anaerobe
MMDBm0562450Yersinia kristenseniiEubacteriaProteobacteriaAerobe
MMDBm0002785pseudotuberculosisEubacteriaProteobacteriaFacultative anaerobe
MMDBm0562754Yersinia rohdeiEubacteriaProteobacteriaObligate anaerobe
MMDBm0552432Yokenella regensburgeiEubacteriaProteobacteriaFacultative anaerobe
MMDBm0000464Bacillus mycoidesEubacteriaFirmicutesFacultative anaerobe
MMDBm0000767Bacillus pseudofirmusEubacteriaFirmicutesFacultative aerobe
MMDBm0001035Bacillus cereusEubacteriaFirmicutesAerobe
MMDBm0001040Bifidobacterium breveEubacteriaActinobacteriaAnaerobe
MMDBm0546994Kluyvera ascorbataEubacteriaProteobacteriaFacultative anaerobe