| MMDBm0097176 | Cyberlindnera fabianii | Fungi | Ascomycota | Human Feces | Not Available | RHEA |
| MMDBm0098147 | Kluyveromyces marxianus DMKU3-1042 | Fungi | Ascomycota | Not Available | Not Available | RHEA |
| MMDBm0000583 | Saccharomyces cerevisiae | Fungi | Ascomycota | Human Feces | Unknown | YMDB |
| MMDBm0097180 | Cyberlindnera jadinii NRRL Y-1542 | Fungi | Ascomycota | Not Available | Not Available | RHEA |
| MMDBm0097296 | Wickerhamomyces anomalus NRRL Y-366-8 | Fungi | Ascomycota | Not Available | Not Available | RHEA |
| MMDBm0098378 | Saccharomyces cerevisiae S288C | Fungi | Ascomycota | Not Available | Not Available | RHEA |
| MMDBm0000599 | Naumovozyma dairenensis | Fungi | Ascomycota | Human Feces | Microbial culture | Not Available |
| MMDBm0098042 | Eremothecium cymbalariae DBVPG#7215 | Fungi | Ascomycota | Not Available | Not Available | RHEA |
| MMDBm0097304 | Wickerhamomyces ciferrii NRRL Y-1031 | Fungi | Ascomycota | Not Available | Not Available | RHEA |
| MMDBm0000583 | Saccharomyces cerevisiae | Fungi | Ascomycota | Human Feces | Microbial culture | Not Available |
| MMDBm0099094 | Hanseniaspora uvarum | Fungi | Ascomycota | Human Feces | Not Available | RHEA |
| MMDBm0098142 | Kluyveromyces lactis NRRL Y-1140 | Fungi | Ascomycota | Not Available | Not Available | RHEA |
| MMDBm0001417 | Clostridium lentocellum DSM 5427 | Bacteria | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0766911 | Brevibacillus agri BAB-2500 | Bacteria | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0692584 | Pseudopropionibacterium propionicum F0230a | Bacteria | Actinobacteria | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0767965 | Paenibacillus lactis 154 | Bacteria | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0802901 | [Clostridium] symbiosum ATCC 14940 | Bacteria | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0802894 | [Clostridium] methoxybenzovorans SR3 | Bacteria | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0000493 | Lactobacillus casei | Bacteria | Firmicutes | Human | Microbial culture | Not Available |
| MMDBm0794438 | Streptococcus australis ATCC 700641 | Bacteria | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0001043 | Blautia hansenii | Bacteria | Firmicutes | Human | Microbial culture | Not Available |
| MMDBm0000445 | Streptococcus intermedius | Bacteria | Firmicutes | Human | Microbial culture | Not Available |
| MMDBm0779389 | Staphylococcus capitis C87 | Bacteria | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0000507 | Lactobacillus salivarius | Bacteria | Firmicutes | Human | Microbial culture | Not Available |
| MMDBm0540122 | Escherichia albertii TW07627 | Bacteria | Proteobacteria | Human Feces | Metabolic reconstruction | VMH |
