MiMeDB: Showing metabocard for Glycocholic acid (MMDBc0000040)

Record Information

Version

1.0

Status

Detected and Quantified

Creation Date

2020-10-27 23:28:10 UTC

Update Date

2022-08-30 23:13:57 UTC

Metabolite ID

MMDBc0000040

Metabolite Identification

Common Name

Glycocholic acid

Description

Glycocholic acid is an acyl glycine and a bile acid-glycine conjugate. It is a secondary bile acid produced by the action of enzymes existing in the microbial flora of the colonic environment. Bacteroides, Bifidobacterium, Clostridium and Lactobacillus are involved in bile acid metabolism and produce glycocholic acid (PMID: 6265737 ; 10629797). In hepatocytes, both primary and secondary bile acids undergo amino acid conjugation at the C-24 carboxylic acid on the side chain, and almost all bile acids in the bile duct therefore exist in a glycine conjugated form (PMID: 16949895 ). More specifically, glycocholic acid or cholylglycine, is a crystalline bile acid involved in the emulsification of fats. It occurs as a sodium salt in the bile of mammals. Its anion is called glycocholate. As the glycine conjugate of cholic acid, this compound acts as a detergent to solubilize fats for absorption and is itself absorbed (PubChem). Bile acids are steroid acids found predominantly in bile of mammals. The distinction between different bile acids is minute, depends only on presence or absence of hydroxyl groups on positions 3, 7, and 12. Bile acids are physiological detergents that facilitate excretion, absorption, and transport of fats and sterols in the intestine and liver. Bile acids are also steroidal amphipathic molecules derived from the catabolism of cholesterol. They modulate bile flow and lipid secretion, are essential for the absorption of dietary fats and vitamins, and have been implicated in the regulation of all the key enzymes involved in cholesterol homeostasis. Bile acids recirculate through the liver, bile ducts, small intestine and portal vein to form an enterohepatic circuit. They exist as anions at physiological pH and, consequently, require a carrier for transport across the membranes of the enterohepatic tissues. The unique detergent properties of bile acids are essential for the digestion and intestinal absorption of hydrophobic nutrients. Bile acids have potent toxic properties (e.g., membrane disruption) and there are a plethora of mechanisms to limit their accumulation in blood and tissues (PMID: 11316487 , 16037564 , 12576301 , 11907135 ). Glycocholic acid is found to be associated with alpha-1-antitrypsin deficiency, which is an inborn error of metabolism.

Structure

MOL 3D MOL SDF 3D SDF PDB 3D PDB SMILES InChI


  Mrv1652307301920072D          

 33 36  0  0  1  0            999 V2000
   -0.3987    0.4304    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9055    0.6018    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3895    0.1997    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7294   -0.4466    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6955    1.7614    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3784    2.2244    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.2230   -1.0980    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.5297    0.8922    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
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    4.4661    2.1537    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
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    3.1221    2.6391    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
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    4.1858    1.3777    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
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    0.0276   -2.5135    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
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    2.5903    3.2699    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.0009   -0.4646    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.3512   -1.9750    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.1430   -4.6932    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9851   -3.8161    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
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 21 30  1  6  0  0  0
 31 22  1  0  0  0  0
 32 23  2  0  0  0  0
 33 23  1  0  0  0  0
M  END

HMDB0000138
     RDKit          3D
Glycocholic acid
 76 79  0  0  0  0  0  0  0  0999 V2000
   -2.7035    1.7836   -2.1546 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8006    0.5192   -1.3727 C   0  0  2  0  0  0  0  0  0  0  0  0
   -4.0960    0.4269   -0.5723 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.3306    0.4660   -1.4055 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.4815    0.3572   -0.4834 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.6529    1.3169    0.4904 O   0  0  0  0  0  0  0  0  0  0  0  0
   -7.3184   -0.6058   -0.5701 N   0  0  0  0  0  0  0  0  0  0  0  0
   -8.4542   -0.7457    0.3122 C   0  0  0  0  0  0  0  0  0  0  0  0
   -8.0102   -1.1992    1.6687 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.7902   -1.3900    1.8630 O   0  0  0  0  0  0  0  0  0  0  0  0
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   -0.3141    0.2052   -0.9561 C   0  0  2  0  0  0  0  0  0  0  0  0
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M  END


  Mrv1652307301920072D          

 33 36  0  0  1  0            999 V2000
   -0.3987    0.4304    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9055    0.6018    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
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    0.7294   -0.4466    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6955    1.7614    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
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    0.2230   -1.0980    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.5297    0.8922    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.7176    0.7470    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.2782    2.2989    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9343    2.7844    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0934    0.4566    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3385   -3.2776    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
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    4.4661    2.1537    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    5.8100    1.6682    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.9249    0.9689    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
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 21 12  1  0  0  0  0
 22  7  1  0  0  0  0
 23 13  1  0  0  0  0
 18 24  1  0  0  0  0
 24 19  1  6  0  0  0
 24 20  1  0  0  0  0
 25  2  1  1  0  0  0
 25  9  1  0  0  0  0
 25 15  1  0  0  0  0
 19 25  1  0  0  0  0
 26  3  1  1  0  0  0
 26 17  1  0  0  0  0
 26 18  1  0  0  0  0
 21 26  1  0  0  0  0
 27 13  1  4  0  0  0
 27 22  2  0  0  0  0
 16 28  1  6  0  0  0
 20 29  1  6  0  0  0
 21 30  1  6  0  0  0
 31 22  1  0  0  0  0
 32 23  2  0  0  0  0
 33 23  1  0  0  0  0
M  END
> <DATABASE_ID>
MMDBc0000040

> <DATABASE_NAME>
MIME

> <SMILES>
C[C@H](CCC(O)=NCC(O)=O)[C@H]1CC[C@H]2[C@@H]3[C@H](O)C[C@@H]4C[C@H](O)CC[C@]4(C)[C@H]3C[C@H](O)[C@]12C

> <INCHI_IDENTIFIER>
InChI=1S/C26H43NO6/c1-14(4-7-22(31)27-13-23(32)33)17-5-6-18-24-19(12-21(30)26(17,18)3)25(2)9-8-16(28)10-15(25)11-20(24)29/h14-21,24,28-30H,4-13H2,1-3H3,(H,27,31)(H,32,33)/t14-,15+,16-,17-,18+,19+,20-,21+,24+,25+,26-/m1/s1

> <INCHI_KEY>
RFDAIACWWDREDC-FRVQLJSFSA-N

> <FORMULA>
C26H43NO6

> <MOLECULAR_WEIGHT>
465.6227

> <EXACT_MASS>
465.309038113

> <JCHEM_ACCEPTOR_COUNT>
6

> <JCHEM_ATOM_COUNT>
76

> <JCHEM_AVERAGE_POLARIZABILITY>
52.79738571393794

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
5

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
2-[(4R)-4-[(1S,2S,5R,7S,9R,10R,11S,14R,15R,16S)-5,9,16-trihydroxy-2,15-dimethyltetracyclo[8.7.0.0^{2,7}.0^{11,15}]heptadecan-14-yl]pentanamido]acetic acid

> <JCHEM_LOGP>
1.3772112169999984

> <JCHEM_MDDR_LIKE_RULE>
1

> <JCHEM_NUMBER_OF_RINGS>
4

> <JCHEM_PHYSIOLOGICAL_CHARGE>
-1

> <JCHEM_PKA>
15.694897850593033

> <JCHEM_PKA_STRONGEST_ACIDIC>
3.7733200967259095

> <JCHEM_PKA_STRONGEST_BASIC>
-0.13936410783518716

> <JCHEM_POLAR_SURFACE_AREA>
127.09

> <JCHEM_REFRACTIVITY>
123.59279999999995

> <JCHEM_ROTATABLE_BOND_COUNT>
6

> <JCHEM_RULE_OF_FIVE>
1

> <JCHEM_TRADITIONAL_IUPAC>
[(4R)-4-[(1S,2S,5R,7S,9R,10R,11S,14R,15R,16S)-5,9,16-trihydroxy-2,15-dimethyltetracyclo[8.7.0.0^{2,7}.0^{11,15}]heptadecan-14-yl]pentanamido]acetic acid

> <JCHEM_VEBER_RULE>
0

$$$$

HMDB0000138
     RDKit          3D
Glycocholic acid
 76 79  0  0  0  0  0  0  0  0999 V2000
   -2.7035    1.7836   -2.1546 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8006    0.5192   -1.3727 C   0  0  2  0  0  0  0  0  0  0  0  0
   -4.0960    0.4269   -0.5723 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.3306    0.4660   -1.4055 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.4815    0.3572   -0.4834 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.6529    1.3169    0.4904 O   0  0  0  0  0  0  0  0  0  0  0  0
   -7.3184   -0.6058   -0.5701 N   0  0  0  0  0  0  0  0  0  0  0  0
   -8.4542   -0.7457    0.3122 C   0  0  0  0  0  0  0  0  0  0  0  0
   -8.0102   -1.1992    1.6687 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.7902   -1.3900    1.8630 O   0  0  0  0  0  0  0  0  0  0  0  0
   -8.8785   -1.4136    2.7031 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6922    0.3164   -0.3993 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.8974   -0.9997    0.3225 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4957   -1.6089    0.4929 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3620   -0.4301    0.2731 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.8009   -0.6370    0.1104 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.4344    0.7606    0.0224 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.8760    1.3966   -1.2141 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3829    1.5402   -1.1209 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.0506    2.3734   -0.0738 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3141    0.2052   -0.9561 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.2148   -0.6537   -2.1699 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9133    0.6859    0.0648 C   0  0  1  0  0  0  0  0  0  0  0  0
    4.4796    1.3900   -1.1790 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4117    1.4592    1.2485 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.5636    0.8565    1.9591 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.5077    0.0778    1.1250 C   0  0  1  0  0  0  0  0  0  0  0  0
    7.3042   -0.7003    1.9948 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.9085   -0.8100    0.1064 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4073   -0.7262    0.0034 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.8082   -1.6573    0.9885 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3481   -1.3756    1.2943 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.1761   -0.7314    2.4966 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2849    2.6353   -1.5841 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6829    2.1064   -2.5464 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0869    1.6187   -3.0885 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8748   -0.3197   -2.1233 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1285   -0.4856    0.0536 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1605    1.2727    0.1507 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.3982   -0.3669   -2.1321 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.4668    1.4596   -1.9157 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.9989    1.3107    1.2855 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.8655    0.2898    0.4735 H   0  0  0  0  0  0  0  0  0  0  0  0
   -9.2506   -1.3629   -0.1054 H   0  0  0  0  0  0  0  0  0  0  0  0
   -9.1232   -0.7237    3.4076 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7135    1.1719    0.3090 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5455   -1.6952   -0.2511 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2705   -0.7819    1.3423 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3950   -2.0938    1.4812 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3568   -2.3202   -0.3511 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.1847    0.2980    1.0936 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.1261   -1.1640   -0.7943 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.0209    1.3442    0.8943 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.1349    0.8343   -2.1366 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.2946    2.4191   -1.3149 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.0383    1.9985   -2.0611 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0013    3.3171   -0.3806 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.6610   -1.3292   -2.1970 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0790    0.0312   -3.0578 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1040   -1.3081   -2.3355 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.3244    2.4800   -1.1321 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.1727    0.9100   -2.1040 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.5986    1.2507   -1.1090 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.5719    1.5838    1.9948 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.6520    2.5234    0.9517 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.1979    0.2865    2.8640 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.1548    1.7051    2.4193 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.2432    0.7643    0.6187 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.5080   -0.2378    2.8289 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.3478   -0.6349   -0.9054 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.1396   -1.8957    0.3205 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.1493   -1.1039   -1.0309 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.4053   -1.7768    1.9312 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.8237   -2.6931    0.5339 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.7582   -2.3369    1.3629 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.6752    0.0978    2.4711 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  1  0
  4  5  1  0
  5  6  1  0
  5  7  2  3
  7  8  1  0
  8  9  1  0
  9 10  2  0
  9 11  1  0
  2 12  1  0
 12 13  1  0
 13 14  1  0
 14 15  1  0
 15 16  1  0
 16 17  1  0
 17 18  1  0
 18 19  1  0
 19 20  1  0
 19 21  1  0
 21 22  1  6
 17 23  1  0
 23 24  1  6
 23 25  1  0
 25 26  1  0
 26 27  1  0
 27 28  1  0
 27 29  1  0
 29 30  1  0
 30 31  1  0
 31 32  1  0
 32 33  1  0
 21 12  1  0
 30 23  1  0
 21 15  1  0
 32 16  1  0
  1 34  1  0
  1 35  1  0
  1 36  1  0
  2 37  1  6
  3 38  1  0
  3 39  1  0
  4 40  1  0
  4 41  1  0
  6 42  1  0
  8 43  1  0
  8 44  1  0
 11 45  1  0
 12 46  1  1
 13 47  1  0
 13 48  1  0
 14 49  1  0
 14 50  1  0
 15 51  1  1
 16 52  1  6
 17 53  1  1
 18 54  1  0
 18 55  1  0
 19 56  1  6
 20 57  1  0
 22 58  1  0
 22 59  1  0
 22 60  1  0
 24 61  1  0
 24 62  1  0
 24 63  1  0
 25 64  1  0
 25 65  1  0
 26 66  1  0
 26 67  1  0
 27 68  1  6
 28 69  1  0
 29 70  1  0
 29 71  1  0
 30 72  1  6
 31 73  1  0
 31 74  1  0
 32 75  1  1
 33 76  1  0
M  END

HEADER    PROTEIN                                 30-JUL-19   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   30-JUL-19         0                                  
HETATM    1  C   UNK     0      -0.744   0.803   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       7.290   1.123   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0       2.594   0.373   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       1.362  -0.834   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       1.298   3.288   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       2.573   4.152   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       0.416  -2.050   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0      10.322   1.665   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0       8.806   1.394   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       9.853   4.291   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       7.344   5.198   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       5.774   0.852   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       0.632  -6.118   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0       0.781   0.593   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0       8.337   4.020   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0      10.845   3.114   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0       1.726   1.809   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0       3.789   3.207   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0       6.298   2.301   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0       5.828   4.926   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0       4.258   0.581   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0       0.997  -3.476   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0      -0.313  -7.334   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0       5.305   3.478   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0       7.813   2.572   0.000  0.00  0.00           C+0
HETATM   26  C   UNK     0       3.266   1.759   0.000  0.00  0.00           C+0
HETATM   27  N   UNK     0       0.052  -4.692   0.000  0.00  0.00           N+0
HETATM   28  O   UNK     0      12.361   3.385   0.000  0.00  0.00           O+0
HETATM   29  O   UNK     0       4.835   6.104   0.000  0.00  0.00           O+0
HETATM   30  O   UNK     0       3.735  -0.867   0.000  0.00  0.00           O+0
HETATM   31  O   UNK     0       2.522  -3.687   0.000  0.00  0.00           O+0
HETATM   32  O   UNK     0       0.267  -8.761   0.000  0.00  0.00           O+0
HETATM   33  O   UNK     0      -1.839  -7.123   0.000  0.00  0.00           O+0
CONECT    1   14                                                            
CONECT    2   25                                                            
CONECT    3   26                                                            
CONECT    4    7   14                                                       
CONECT    5    6   17                                                       
CONECT    6    5   18                                                       
CONECT    7    4   22                                                       
CONECT    8    9   16                                                       
CONECT    9    8   25                                                       
CONECT   10   15   16                                                       
CONECT   11   15   20                                                       
CONECT   12   19   21                                                       
CONECT   13   23   27                                                       
CONECT   14    1    4   17                                                  
CONECT   15   10   11   25                                                  
CONECT   16    8   10   28                                                  
CONECT   17    5   14   26                                                  
CONECT   18    6   24   26                                                  
CONECT   19   12   24   25                                                  
CONECT   20   11   24   29                                                  
CONECT   21   12   26   30                                                  
CONECT   22    7   27   31                                                  
CONECT   23   13   32   33                                                  
CONECT   24   18   19   20                                                  
CONECT   25    2    9   15   19                                             
CONECT   26    3   17   18   21                                             
CONECT   27   13   22                                                       
CONECT   28   16                                                            
CONECT   29   20                                                            
CONECT   30   21                                                            
CONECT   31   22                                                            
CONECT   32   23                                                            
CONECT   33   23                                                            
MASTER        0    0    0    0    0    0    0    0   33    0   72    0
END

COMPND    HMDB0000138
HETATM    1  C1  UNL     1      -2.703   1.784  -2.155  1.00  0.00           C  
HETATM    2  C2  UNL     1      -2.801   0.519  -1.373  1.00  0.00           C  
HETATM    3  C3  UNL     1      -4.096   0.427  -0.572  1.00  0.00           C  
HETATM    4  C4  UNL     1      -5.331   0.466  -1.406  1.00  0.00           C  
HETATM    5  C5  UNL     1      -6.481   0.357  -0.483  1.00  0.00           C  
HETATM    6  O1  UNL     1      -6.653   1.317   0.490  1.00  0.00           O  
HETATM    7  N1  UNL     1      -7.318  -0.606  -0.570  1.00  0.00           N  
HETATM    8  C6  UNL     1      -8.454  -0.746   0.312  1.00  0.00           C  
HETATM    9  C7  UNL     1      -8.010  -1.199   1.669  1.00  0.00           C  
HETATM   10  O2  UNL     1      -6.790  -1.390   1.863  1.00  0.00           O  
HETATM   11  O3  UNL     1      -8.878  -1.414   2.703  1.00  0.00           O  
HETATM   12  C8  UNL     1      -1.692   0.316  -0.399  1.00  0.00           C  
HETATM   13  C9  UNL     1      -1.897  -1.000   0.322  1.00  0.00           C  
HETATM   14  C10 UNL     1      -0.496  -1.609   0.493  1.00  0.00           C  
HETATM   15  C11 UNL     1       0.362  -0.430   0.273  1.00  0.00           C  
HETATM   16  C12 UNL     1       1.801  -0.637   0.110  1.00  0.00           C  
HETATM   17  C13 UNL     1       2.434   0.761   0.022  1.00  0.00           C  
HETATM   18  C14 UNL     1       1.876   1.397  -1.214  1.00  0.00           C  
HETATM   19  C15 UNL     1       0.383   1.540  -1.121  1.00  0.00           C  
HETATM   20  O4  UNL     1       0.051   2.373  -0.074  1.00  0.00           O  
HETATM   21  C16 UNL     1      -0.314   0.205  -0.956  1.00  0.00           C  
HETATM   22  C17 UNL     1      -0.215  -0.654  -2.170  1.00  0.00           C  
HETATM   23  C18 UNL     1       3.913   0.686   0.065  1.00  0.00           C  
HETATM   24  C19 UNL     1       4.480   1.390  -1.179  1.00  0.00           C  
HETATM   25  C20 UNL     1       4.412   1.459   1.248  1.00  0.00           C  
HETATM   26  C21 UNL     1       5.564   0.856   1.959  1.00  0.00           C  
HETATM   27  C22 UNL     1       6.508   0.078   1.125  1.00  0.00           C  
HETATM   28  O5  UNL     1       7.304  -0.700   1.995  1.00  0.00           O  
HETATM   29  C23 UNL     1       5.908  -0.810   0.106  1.00  0.00           C  
HETATM   30  C24 UNL     1       4.407  -0.726   0.003  1.00  0.00           C  
HETATM   31  C25 UNL     1       3.808  -1.657   0.988  1.00  0.00           C  
HETATM   32  C26 UNL     1       2.348  -1.376   1.294  1.00  0.00           C  
HETATM   33  O6  UNL     1       2.176  -0.731   2.497  1.00  0.00           O  
HETATM   34  H1  UNL     1      -2.285   2.635  -1.584  1.00  0.00           H  
HETATM   35  H2  UNL     1      -3.683   2.106  -2.546  1.00  0.00           H  
HETATM   36  H3  UNL     1      -2.087   1.619  -3.088  1.00  0.00           H  
HETATM   37  H4  UNL     1      -2.875  -0.320  -2.123  1.00  0.00           H  
HETATM   38  H5  UNL     1      -4.129  -0.486   0.054  1.00  0.00           H  
HETATM   39  H6  UNL     1      -4.161   1.273   0.151  1.00  0.00           H  
HETATM   40  H7  UNL     1      -5.398  -0.367  -2.132  1.00  0.00           H  
HETATM   41  H8  UNL     1      -5.467   1.460  -1.916  1.00  0.00           H  
HETATM   42  H9  UNL     1      -5.999   1.311   1.286  1.00  0.00           H  
HETATM   43  H10 UNL     1      -8.865   0.290   0.474  1.00  0.00           H  
HETATM   44  H11 UNL     1      -9.251  -1.363  -0.105  1.00  0.00           H  
HETATM   45  H12 UNL     1      -9.123  -0.724   3.408  1.00  0.00           H  
HETATM   46  H13 UNL     1      -1.713   1.172   0.309  1.00  0.00           H  
HETATM   47  H14 UNL     1      -2.545  -1.695  -0.251  1.00  0.00           H  
HETATM   48  H15 UNL     1      -2.271  -0.782   1.342  1.00  0.00           H  
HETATM   49  H16 UNL     1      -0.395  -2.094   1.481  1.00  0.00           H  
HETATM   50  H17 UNL     1      -0.357  -2.320  -0.351  1.00  0.00           H  
HETATM   51  H18 UNL     1       0.185   0.298   1.094  1.00  0.00           H  
HETATM   52  H19 UNL     1       2.126  -1.164  -0.794  1.00  0.00           H  
HETATM   53  H20 UNL     1       2.021   1.344   0.894  1.00  0.00           H  
HETATM   54  H21 UNL     1       2.135   0.834  -2.137  1.00  0.00           H  
HETATM   55  H22 UNL     1       2.295   2.419  -1.315  1.00  0.00           H  
HETATM   56  H23 UNL     1       0.038   1.998  -2.061  1.00  0.00           H  
HETATM   57  H24 UNL     1      -0.001   3.317  -0.381  1.00  0.00           H  
HETATM   58  H25 UNL     1       0.661  -1.329  -2.197  1.00  0.00           H  
HETATM   59  H26 UNL     1      -0.079   0.031  -3.058  1.00  0.00           H  
HETATM   60  H27 UNL     1      -1.104  -1.308  -2.335  1.00  0.00           H  
HETATM   61  H28 UNL     1       4.324   2.480  -1.132  1.00  0.00           H  
HETATM   62  H29 UNL     1       4.173   0.910  -2.104  1.00  0.00           H  
HETATM   63  H30 UNL     1       5.599   1.251  -1.109  1.00  0.00           H  
HETATM   64  H31 UNL     1       3.572   1.584   1.995  1.00  0.00           H  
HETATM   65  H32 UNL     1       4.652   2.523   0.952  1.00  0.00           H  
HETATM   66  H33 UNL     1       5.198   0.287   2.864  1.00  0.00           H  
HETATM   67  H34 UNL     1       6.155   1.705   2.419  1.00  0.00           H  
HETATM   68  H35 UNL     1       7.243   0.764   0.619  1.00  0.00           H  
HETATM   69  H36 UNL     1       7.508  -0.238   2.829  1.00  0.00           H  
HETATM   70  H37 UNL     1       6.348  -0.635  -0.905  1.00  0.00           H  
HETATM   71  H38 UNL     1       6.140  -1.896   0.320  1.00  0.00           H  
HETATM   72  H39 UNL     1       4.149  -1.104  -1.031  1.00  0.00           H  
HETATM   73  H40 UNL     1       4.405  -1.777   1.931  1.00  0.00           H  
HETATM   74  H41 UNL     1       3.824  -2.693   0.534  1.00  0.00           H  
HETATM   75  H42 UNL     1       1.758  -2.337   1.363  1.00  0.00           H  
HETATM   76  H43 UNL     1       1.675   0.098   2.471  1.00  0.00           H  
CONECT    1    2   34   35   36
CONECT    2    3   12   37
CONECT    3    4   38   39
CONECT    4    5   40   41
CONECT    5    6    7    7
CONECT    6   42
CONECT    7    8
CONECT    8    9   43   44
CONECT    9   10   10   11
CONECT   11   45
CONECT   12   13   21   46
CONECT   13   14   47   48
CONECT   14   15   49   50
CONECT   15   16   21   51
CONECT   16   17   32   52
CONECT   17   18   23   53
CONECT   18   19   54   55
CONECT   19   20   21   56
CONECT   20   57
CONECT   21   22
CONECT   22   58   59   60
CONECT   23   24   25   30
CONECT   24   61   62   63
CONECT   25   26   64   65
CONECT   26   27   66   67
CONECT   27   28   29   68
CONECT   28   69
CONECT   29   30   70   71
CONECT   30   31   72
CONECT   31   32   73   74
CONECT   32   33   75
CONECT   33   76
END

HMDB0000138
     RDKit          3D
Glycocholic acid
 76 79  0  0  0  0  0  0  0  0999 V2000
   -2.7035    1.7836   -2.1546 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8006    0.5192   -1.3727 C   0  0  2  0  0  0  0  0  0  0  0  0
   -4.0960    0.4269   -0.5723 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.3306    0.4660   -1.4055 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.4815    0.3572   -0.4834 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.6529    1.3169    0.4904 O   0  0  0  0  0  0  0  0  0  0  0  0
   -7.3184   -0.6058   -0.5701 N   0  0  0  0  0  0  0  0  0  0  0  0
   -8.4542   -0.7457    0.3122 C   0  0  0  0  0  0  0  0  0  0  0  0
   -8.0102   -1.1992    1.6687 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.7902   -1.3900    1.8630 O   0  0  0  0  0  0  0  0  0  0  0  0
   -8.8785   -1.4136    2.7031 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6922    0.3164   -0.3993 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.8974   -0.9997    0.3225 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4957   -1.6089    0.4929 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3620   -0.4301    0.2731 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.8009   -0.6370    0.1104 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.4344    0.7606    0.0224 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.8760    1.3966   -1.2141 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3829    1.5402   -1.1209 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.0506    2.3734   -0.0738 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3141    0.2052   -0.9561 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.2148   -0.6537   -2.1699 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9133    0.6859    0.0648 C   0  0  1  0  0  0  0  0  0  0  0  0
    4.4796    1.3900   -1.1790 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4117    1.4592    1.2485 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.5636    0.8565    1.9591 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.5077    0.0778    1.1250 C   0  0  1  0  0  0  0  0  0  0  0  0
    7.3042   -0.7003    1.9948 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.9085   -0.8100    0.1064 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4073   -0.7262    0.0034 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.8082   -1.6573    0.9885 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3481   -1.3756    1.2943 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.1761   -0.7314    2.4966 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2849    2.6353   -1.5841 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6829    2.1064   -2.5464 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0869    1.6187   -3.0885 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8748   -0.3197   -2.1233 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1285   -0.4856    0.0536 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1605    1.2727    0.1507 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.3982   -0.3669   -2.1321 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.4668    1.4596   -1.9157 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.9989    1.3107    1.2855 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.8655    0.2898    0.4735 H   0  0  0  0  0  0  0  0  0  0  0  0
   -9.2506   -1.3629   -0.1054 H   0  0  0  0  0  0  0  0  0  0  0  0
   -9.1232   -0.7237    3.4076 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7135    1.1719    0.3090 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5455   -1.6952   -0.2511 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2705   -0.7819    1.3423 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3950   -2.0938    1.4812 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3568   -2.3202   -0.3511 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.1847    0.2980    1.0936 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.1261   -1.1640   -0.7943 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.0209    1.3442    0.8943 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.1349    0.8343   -2.1366 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.2946    2.4191   -1.3149 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.0383    1.9985   -2.0611 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0013    3.3171   -0.3806 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.6610   -1.3292   -2.1970 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0790    0.0312   -3.0578 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1040   -1.3081   -2.3355 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.3244    2.4800   -1.1321 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.1727    0.9100   -2.1040 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.5986    1.2507   -1.1090 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.5719    1.5838    1.9948 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.6520    2.5234    0.9517 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.1979    0.2865    2.8640 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.1548    1.7051    2.4193 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.2432    0.7643    0.6187 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.5080   -0.2378    2.8289 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.3478   -0.6349   -0.9054 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.1396   -1.8957    0.3205 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.1493   -1.1039   -1.0309 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.4053   -1.7768    1.9312 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.8237   -2.6931    0.5339 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.7582   -2.3369    1.3629 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.6752    0.0978    2.4711 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  1  0
  4  5  1  0
  5  6  1  0
  5  7  2  3
  7  8  1  0
  8  9  1  0
  9 10  2  0
  9 11  1  0
  2 12  1  0
 12 13  1  0
 13 14  1  0
 14 15  1  0
 15 16  1  0
 16 17  1  0
 17 18  1  0
 18 19  1  0
 19 20  1  0
 19 21  1  0
 21 22  1  6
 17 23  1  0
 23 24  1  6
 23 25  1  0
 25 26  1  0
 26 27  1  0
 27 28  1  0
 27 29  1  0
 29 30  1  0
 30 31  1  0
 31 32  1  0
 32 33  1  0
 21 12  1  0
 30 23  1  0
 21 15  1  0
 32 16  1  0
  1 34  1  0
  1 35  1  0
  1 36  1  0
  2 37  1  6
  3 38  1  0
  3 39  1  0
  4 40  1  0
  4 41  1  0
  6 42  1  0
  8 43  1  0
  8 44  1  0
 11 45  1  0
 12 46  1  1
 13 47  1  0
 13 48  1  0
 14 49  1  0
 14 50  1  0
 15 51  1  1
 16 52  1  6
 17 53  1  1
 18 54  1  0
 18 55  1  0
 19 56  1  6
 20 57  1  0
 22 58  1  0
 22 59  1  0
 22 60  1  0
 24 61  1  0
 24 62  1  0
 24 63  1  0
 25 64  1  0
 25 65  1  0
 26 66  1  0
 26 67  1  0
 27 68  1  6
 28 69  1  0
 29 70  1  0
 29 71  1  0
 30 72  1  6
 31 73  1  0
 31 74  1  0
 32 75  1  1
 33 76  1  0
M  END

Synonyms

Value	Source
3alpha,7alpha,12alpha-Trihydroxy-5beta-cholan-24-oylglycine	ChEBI
N-[(3alpha,5beta,7alpha,12alpha)-3,7,12-Trihydroxy-24-oxocholan-24-yl]glycine	ChEBI
N-Choloylglycine	ChEBI
3a,7a,12a-Trihydroxy-5b-cholan-24-oylglycine	Generator
3Α,7α,12α-trihydroxy-5β-cholan-24-oylglycine	Generator
N-[(3a,5b,7a,12a)-3,7,12-Trihydroxy-24-oxocholan-24-yl]glycine	Generator
N-[(3Α,5β,7α,12α)-3,7,12-trihydroxy-24-oxocholan-24-yl]glycine	Generator
Glycocholate	Generator
Glycine cholate	HMDB
Glycocholic acid, sodium salt	HMDB
Cholylglycine	HMDB
Glycocholate sodium	HMDB
3alpha,7alpha,12alpha-Trihydroxy-5beta-cholanic acid-24-glycine	HMDB
3alpha,7alpha,12alpha-Trihydroxy-N-(carboxymethyl)-5beta-cholan-24-amide	HMDB
3Α,7α,12α-trihydroxy-5β-cholanic acid-24-glycine	HMDB
3Α,7α,12α-trihydroxy-N-(carboxymethyl)-5β-cholan-24-amide	HMDB
Glycoreductodehydrocholic acid	HMDB
Glycylcholate	HMDB
Glycylcholic acid	HMDB
N-(Carboxymethyl)-3alpha,7alpha,12alpha-trihydroxy-5beta-cholan-24-amide	HMDB
N-(Carboxymethyl)-3α,7α,12α-trihydroxy-5β-cholan-24-amide	HMDB
N-Choloyl-glycine	HMDB
Glycocholic acid	HMDB

Molecular Formula

C₂₆H₄₃NO₆

Average Mass

465.6227

Monoisotopic Mass

465.309038113

IUPAC Name

2-[(4R)-4-[(1S,2S,5R,7S,9R,10R,11S,14R,15R,16S)-5,9,16-trihydroxy-2,15-dimethyltetracyclo[8.7.0.0^{2,7}.0^{11,15}]heptadecan-14-yl]pentanamido]acetic acid

Traditional Name

[(4R)-4-[(1S,2S,5R,7S,9R,10R,11S,14R,15R,16S)-5,9,16-trihydroxy-2,15-dimethyltetracyclo[8.7.0.0^{2,7}.0^{11,15}]heptadecan-14-yl]pentanamido]acetic acid

CAS Registry Number

475-31-0

SMILES

C[C@H](CCC(O)=NCC(O)=O)[C@H]1CC[C@H]2[C@@H]3[C@H](O)C[C@@H]4C[C@H](O)CC[C@]4(C)[C@H]3C[C@H](O)[C@]12C

InChI Identifier

InChI=1S/C26H43NO6/c1-14(4-7-22(31)27-13-23(32)33)17-5-6-18-24-19(12-21(30)26(17,18)3)25(2)9-8-16(28)10-15(25)11-20(24)29/h14-21,24,28-30H,4-13H2,1-3H3,(H,27,31)(H,32,33)/t14-,15+,16-,17-,18+,19+,20-,21+,24+,25+,26-/m1/s1

InChI Key

RFDAIACWWDREDC-FRVQLJSFSA-N

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as glycinated bile acids and derivatives. Glycinated bile acids and derivatives are compounds with a structure characterized by the presence of a glycine linked to a bile acid skeleton.

Kingdom

Organic compounds

Super Class

Lipids and lipid-like molecules

Class

Steroids and steroid derivatives

Sub Class

Bile acids, alcohols and derivatives

Direct Parent

Glycinated bile acids and derivatives

Alternative Parents

Substituents

Glycinated bile acid
Trihydroxy bile acid, alcohol, or derivatives
Hydroxy bile acid, alcohol, or derivatives
3-hydroxysteroid
12-hydroxysteroid
Hydroxysteroid
3-alpha-hydroxysteroid
7-hydroxysteroid
N-acyl-alpha-amino acid
N-acyl-alpha amino acid or derivatives
Alpha-amino acid or derivatives
Cyclic alcohol
Secondary alcohol
Polyol
Propargyl-type 1,3-dipolar organic compound
Organic 1,3-dipolar compound
Carboximidic acid
Monocarboxylic acid or derivatives
Carboximidic acid derivative
Carboxylic acid derivative
Carboxylic acid
Organooxygen compound
Organic oxygen compound
Organopnictogen compound
Organic oxide
Hydrocarbon derivative
Organic nitrogen compound
Carbonyl group
Alcohol
Organonitrogen compound
Aliphatic homopolycyclic compound

Molecular Framework

Aliphatic homopolycyclic compounds

External Descriptors

bile acid glycine conjugate (CHEBI:17687 )
C26 bile acids, alcohols, and derivatives (C01921 )
Glycine conjugates (C01921 )
Cholane and derivatives (C01921 )
Glycine conjugates (LMST05030001 )

Functional Ontology

Not Available

Physical Properties

State

Expected Solid

Predicted Properties

Property	Value	Source
logP	1.38	ChemAxon
pKa (Strongest Acidic)	3.77	ChemAxon
pKa (Strongest Basic)	-0.14	ChemAxon
Physiological Charge	-1	ChemAxon
Hydrogen Acceptor Count	6	ChemAxon
Hydrogen Donor Count	5	ChemAxon
Polar Surface Area	127.09 Å²	ChemAxon
Rotatable Bond Count	6	ChemAxon
Refractivity	123.59 m³·mol⁻¹	ChemAxon
Polarizability	52.8 Å³	ChemAxon
Number of Rings	4	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	Yes	ChemAxon

Spectra

Spectrum Type	Description	Splash Key	Deposition Date	View
Predicted GC-MS	Predicted GC-MS Spectrum - GC-MS (Non-derivatized) - 70eV, Positive	Not Available	2021-10-12	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - GC-MS (Non-derivatized) - 70eV, Positive	Not Available	2021-10-12	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - GC-MS (TMS_1_1) - 70eV, Positive	Not Available	2021-11-05	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - GC-MS (TMS_1_2) - 70eV, Positive	Not Available	2021-11-05	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - GC-MS (TMS_1_3) - 70eV, Positive	Not Available	2021-11-05	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - GC-MS (TMS_1_4) - 70eV, Positive	Not Available	2021-11-05	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - GC-MS (TMS_1_5) - 70eV, Positive	Not Available	2021-11-05	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - GC-MS (TMS_2_1) - 70eV, Positive	Not Available	2021-11-05	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - GC-MS (TMS_2_2) - 70eV, Positive	Not Available	2021-11-05	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - GC-MS (TMS_2_3) - 70eV, Positive	Not Available	2021-11-05	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - GC-MS (TMS_2_4) - 70eV, Positive	Not Available	2021-11-05	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - GC-MS (TMS_2_5) - 70eV, Positive	Not Available	2021-11-05	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - GC-MS (TMS_2_6) - 70eV, Positive	Not Available	2021-11-05	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - GC-MS (TMS_2_7) - 70eV, Positive	Not Available	2021-11-05	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - GC-MS (TMS_2_8) - 70eV, Positive	Not Available	2021-11-05	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - GC-MS (TMS_2_9) - 70eV, Positive	Not Available	2021-11-05	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - GC-MS (TMS_2_10) - 70eV, Positive	Not Available	2021-11-05	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - GC-MS (TMS_3_1) - 70eV, Positive	Not Available	2021-11-05	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - GC-MS (TMS_3_2) - 70eV, Positive	Not Available	2021-11-05	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - GC-MS (TMS_3_3) - 70eV, Positive	Not Available	2021-11-05	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - GC-MS (TMS_3_4) - 70eV, Positive	Not Available	2021-11-05	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - GC-MS (TMS_3_5) - 70eV, Positive	Not Available	2021-11-05	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - GC-MS (TMS_3_6) - 70eV, Positive	Not Available	2021-11-05	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - GC-MS (TMS_3_7) - 70eV, Positive	Not Available	2021-11-05	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - GC-MS (TMS_3_8) - 70eV, Positive	Not Available	2021-11-05	View Spectrum
LC-MS/MS	LC-MS/MS Spectrum - Quattro_QQQ 10V, Negative (Annotated)	splash10-03di-0000900000-52e93813a9681b93b67c	2019-05-16	View Spectrum
LC-MS/MS	LC-MS/MS Spectrum - Quattro_QQQ 25V, Negative (Annotated)	splash10-03k9-4000900000-79dfcaf6e620e89a8f51	2019-05-16	View Spectrum
LC-MS/MS	LC-MS/MS Spectrum - Quattro_QQQ 40V, Negative (Annotated)	splash10-00di-9000000000-0153bf31bdc096136252	2019-05-16	View Spectrum
LC-MS/MS	LC-MS/MS Spectrum - 40V, Negative	splash10-00di-9000400000-e797c46f8e20c716b24c	2021-09-20	View Spectrum
LC-MS/MS	LC-MS/MS Spectrum - 40V, Negative	splash10-00di-9000200000-478282fdac3fd2f1d8a5	2021-09-20	View Spectrum
LC-MS/MS	LC-MS/MS Spectrum - 20V, Negative	splash10-03di-0000900000-ea860edeae64135340d1	2021-09-20	View Spectrum
LC-MS/MS	LC-MS/MS Spectrum - 40V, Negative	splash10-00di-9000300000-9a12b83610eacbe64ab6	2021-09-20	View Spectrum
LC-MS/MS	LC-MS/MS Spectrum - 10V, Negative	splash10-03di-0000900000-54d1a3d9fa6179530909	2021-09-20	View Spectrum
LC-MS/MS	LC-MS/MS Spectrum - 20V, Negative	splash10-03di-0000900000-e81f9c948a937824aad7	2021-09-20	View Spectrum
LC-MS/MS	LC-MS/MS Spectrum - 10V, Negative	splash10-03di-0000900000-7872961e706b0ce2acef	2021-09-20	View Spectrum
LC-MS/MS	LC-MS/MS Spectrum - 10V, Positive	splash10-03e9-0000900000-d2c234df86de685accab	2021-09-20	View Spectrum
LC-MS/MS	LC-MS/MS Spectrum - 40V, Positive	splash10-0a6r-3950000000-5e1c0bb11352c04bf6ab	2021-09-20	View Spectrum
LC-MS/MS	LC-MS/MS Spectrum - 20V, Positive	splash10-03di-1245900000-820e9f5a57e1ee8bcc05	2021-09-20	View Spectrum
LC-MS/MS	LC-MS/MS Spectrum - 20V, Positive	splash10-03dr-0125900000-2a2d378bef3e5d7d7ef3	2021-09-20	View Spectrum
LC-MS/MS	LC-MS/MS Spectrum - 35V, Positive	splash10-03g0-2896300000-3561f6267f9465ea26a7	2021-09-20	View Spectrum
LC-MS/MS	LC-MS/MS Spectrum - 35V, Positive	splash10-092i-2896300000-a9ffe90b7ae4ed58097b	2021-09-20	View Spectrum
LC-MS/MS	LC-MS/MS Spectrum - 40V, Positive	splash10-06vi-2950000000-acdd4501d3673c8d4f18	2021-09-20	View Spectrum
LC-MS/MS	LC-MS/MS Spectrum - 10V, Positive	splash10-03e9-0000900000-6e1ef68f12bc3fcd4183	2021-09-20	View Spectrum
LC-MS/MS	LC-MS/MS Spectrum - 10V, Positive	splash10-01q9-0000900000-5010fdb018700f1ff637	2021-09-20	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 10V, Positive	splash10-00ea-5001900000-32dcdb2995334e0be0c9	2016-08-03	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 20V, Positive	splash10-00di-9001200000-efaede61ec6ea62b8f4b	2016-08-03	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 40V, Positive	splash10-00di-9001000000-4a63863012ce5e7f9e89	2016-08-03	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 10V, Negative	splash10-03dj-0000900000-e906f3d7308d2f341edc	2016-08-03	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 20V, Negative	splash10-0h2b-2001900000-b325ccc2ef8a18eae690	2016-08-03	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 40V, Negative	splash10-00dl-9101100000-9cd953b22c5f0740b0bb	2016-08-03	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, experimental)		2019-05-16	View Spectrum
2D NMR	[¹H, ¹³C]-HSQC NMR Spectrum (2D, 600 MHz, H₂O, experimental)		2019-05-16	View Spectrum

Biological Properties

Cellular Locations

Extracellular

Biospecimen Locations

Blood
Feces
Fibroblasts
Liver
Placenta
Prostate
Urine

Tissue Locations

Fibroblasts
Liver
Placenta
Prostate

Associated OMIM IDs

114500 (Colorectal cancer)
610247 (Eosinophilic esophagitis)

Human Proteins and Enzymes

Protein ID	Protein Name	Protein Type	Uniprot ID	Species
MMDBp0192196	Bile acid-CoA:amino acid N-acyltransferase	Enzyme	Q14032	Homo sapiens
MMDBp0194143	Glycine N-acyltransferase	Enzyme	Q6IB77	Homo sapiens
MMDBp0194144	Glycine N-acyltransferase-like protein 1	Enzyme	Q969I3	Homo sapiens
MMDBp0194145	Glycine N-acyltransferase-like protein 2	Enzyme	Q8WU03	Homo sapiens
MMDBp0194146	Glycine N-acyltransferase-like protein 3	Enzyme	Q5SZD4	Homo sapiens

Human Pathways

Pathways

Name	SMPDB/PathBank

Metabolic Reactions

Reaction ID	Precursor	Product	Enzyme	Reaction Type	Data Source	Reference
MMDBr0000366	Choloyl-CoA	Coenzyme A	Bile acid coa:amino acid n-acyltransferase	Bile Acid Coenzyme A: Amino Acid N-Acyltransferase	VMH	30371894
MMDBr0001275	Glycocholic acid	Glycocholic acid	Solute carrier organic anion transporter family, member 1a2	Glycocholate Transport via Bicarbonate Antiport	VMH	12507753 9007731 9334206
MMDBr0001276	Glycocholic acid	Glycocholic acid	Solute carrier family 10 (sodium/bile acid cotransporter), member 1	Glycocholate Transport via Sodium Symport	VMH	12851823 7592981 8132774 9109432
MMDBr0001277	Glycocholic acid	Glycocholic acid	Not Available	Bile Acid Intracellular Transport	VMH	30371894
MMDBr0001278	Glycocholic acid	Glycocholic acid	Not Available	Bile Acid Intracellular Transport	VMH	30371894
MMDBr0002631	Choloyl-CoA	Coenzyme A	Bile acid coa:amino acid n-acyltransferase	Choloyl Coenzyme A:Glycine N-Choloyltransferase Bile Acid Biosynthesis	VMH	10884298 12239217 12543708 15026425 3741411 6884990
MMDBr0002796	Glycocholic acid	Glycocholic acid	Solute carrier family 10 (sodium/bile acid cotransporter), member 1	Na (+)Bile Acid Symporter Active Transport	VMH	15975683
MMDBr0002870	Glycocholic acid	Glycocholic acid	Solute carrier family 10 (sodium/bile acid cotransporter), member 1	Glycoside-Pentoside-Hexuronide (Gph):Cation Symporter Tcdb:2.A.28.1.1	VMH	15297262
MMDBr0003553	Glycocholic acid	Glycocholic acid	Solute carrier organic anion transporter family, member 1a2	Resistance-Nodulation-Cell Division (Rnd) Tcdb:2.A.60.1.14	VMH	11076394 11076396 14579113
MMDBr0003566	Glycocholic acid	Glycocholic acid	Solute carrier organic anion transporter family, member 1a2	Resistance-Nodulation-Cell Division (Rnd) Tcdb:2.A.60.1.14	VMH	11076394 11076396 14579113
MMDBr0003567	Glycocholic acid	Glycocholic acid	Solute carrier organic anion transporter family, member 1a2	Resistance-Nodulation-Cell Division (Rnd) Tcdb:2.A.60.1.14	VMH	11076394 11076396 14579113
MMDBr0005680	Adenosine triphosphate	ADP	Atp-binding cassette, sub-family b (mdr/tap), member 11	ABC Bile Acid Transporter	VMH	30371894
MMDBr0012623	Glycocholic acid	Cholic acid	Not Available	Glycocholate hydrolysis by bile salt hydrolase (EC 3.5.1.24)	VMH	30371894
MMDBr0013857	Glycocholic acid	Cholic acid	Conjugated bile acid hydrolase	Hydrolysis of bond	RHEA	34755880
MMDBr0013858	Glycocholic acid	Cholic acid	Conjugated bile acid hydrolase	Hydrolysis of bond	RHEA	34755880
MMDBr0016710	Glycocholic acid	7-oxo-glycodeoxycholic acid	7alpha-hydroxysteroid dehydrogenase	Dehydrogenation	RHEA	34755880
MMDBr0016711	Glycocholic acid	7-oxo-glycodeoxycholic acid	7alpha-hydroxysteroid dehydrogenase	Dehydrogenation	RHEA	34755880

Health Effects and Bioactivity

Health Outcome/Bioactivity	Metabolite Response/Effect	Evidence Type	Host and Biospecimen	Data Source	Reference
Acute liver failure		Association	Human Blood	HMDB	7119120
Biliary atresia	Increased	Association	Human Blood	HMDB	7119120
Celiac disease	Increased	Association	Human Blood	HMDB	3816078
Cystic fibrosis		Association	Human Blood	HMDB	7119120
Galactosemia type 1		Association	Human Blood	HMDB	7119120
Glycogen storage disease	Slight Increase	Association	Human Blood	HMDB	7119120
Neonatal hepatitis		Association	Human Blood	HMDB	7119120
Portal vein obstruction		Association	Human Blood	HMDB	7119120
Wilson's disease		Association	Human Blood	HMDB	7119120

Microbial Sources

Superkingdom/Kingdom	Phylum	Total species	Hosts and Body Sites	Microbial Links
Bacteria	Firmicutes	104	Human ; Human mucosa; Human feces; Human saliva; Pig ; Human stool; Human urine	Microbial culture; Metabolic reconstruction
Bacteria	Bacteroidetes	51	Human feces; Human ; Human urine; Human appendix biopsy; Human stool; Human saliva	Microbial culture; Metabolic reconstruction
Bacteria	Actinobacteria	40	Human ; Human feces; Human saliva; Human mucosa; Human stool; Human supragingival plaque	Microbial culture; Metabolic reconstruction
Bacteria	Proteobacteria	5	Human feces; Human	Metabolic reconstruction
Bacteria	Fusobacteria	3	Human feces	Metabolic reconstruction
Archaea	Euryarchaeota	2		Metabolic reconstruction
Bacteria	Planctomycetes	1	Human feces	Metabolic reconstruction

Exposure Sources

Source Type	Source Sub-type	Species	Data Source	Reference

Host Biospecimen and Location

Host and Biospecimen	Status	Mean	Std	Min	Max	Units	Age	Sex	Health Condition	Data Source	Reference
Human Blood	Detected and Quantified	0.7	0.13			uM	Adult (>18 years old)	Both	Celiac Disease	HMDB	3816078
Human Blood	Detected and Quantified	0.06	0.04			uM	Adult (>18 years old)	Both	Normal	HMDB	3816078
Human Urine	Detected and Quantified	0.42	0.36			umol/mmol creatinine	Adult (>18 years old)	Both	Normal	HMDB	3944741
Human Blood	Detected and Quantified	0.88	0.26			uM	Children (1-13 years old)	Not Specified	Normal	HMDB	7119120
Human Blood	Detected and Quantified	44	29.1			uM	Children (1-13 years old)	Not Specified	Extrahepatic biliary atresia (EHBA)	HMDB	7119120
Human Blood	Detected and Quantified	8.6	7.9			uM	Children (1-13 years old)	Not Specified	Glycogen storage disease	HMDB	7119120
Human Blood	Detected and Quantified	91.8	54.9			uM	Adult (>18 years old)	Not Specified	Intrahepatic biliary hypoplasia	HMDB	7119120
Human Blood	Detected and Quantified	14.5	16.1			uM	Children (1-13 years old)	Not Specified	Chronic active hepatitis	HMDB	7119120
Human Blood	Detected and Quantified	25.9	24			uM	Children (1-13 years old)	Not Specified	Alpha-1-antitrypsin deficiency	HMDB	7119120
Human Blood	Detected and Quantified	10.5	13.1			uM	Children (1-13 years old)	Not Specified	Portal vein obstruction	HMDB	7119120
Human Blood	Detected and Quantified	9.8	14.7			uM	Children (1-13 years old)	Not Specified	Cystic fibrosis	HMDB	7119120
Human Blood	Detected and Quantified	2.9	2.4			uM	Children (1-13 years old)	Not Specified	Galactosemia	HMDB	7119120
Human Blood	Detected and Quantified	8.4	8.7			uM	Children (1-13 years old)	Not Specified	Cholecohal cyst	HMDB	7119120
Human Blood	Detected and Quantified	5.1	6.9			uM	Children (1-13 years old)	Not Specified	Wilson's disease	HMDB	7119120
Human Blood	Detected and Quantified	1.5	1.2			uM	Children (1-13 years old)	Not Specified	Fulminant hepatic failure	HMDB	7119120
Human Blood	Detected and Quantified	2.8	3.1			uM	Children (1-13 years old)	Not Specified	Idiopathic neonatal hepatitis	HMDB	7119120
Human Blood	Detected and Quantified	43.6	11.8			uM	Adult (>18 years old)	Both	Hepatobiliary Disease	HMDB	16629939
Human Feces	Detected but not Quantified						Adult (>18 years old)	Both	CCD	HMDB	19636438
Human Feces	Detected but not Quantified						Adult (>18 years old)	Both	Ileal Crohn's disease	HMDB	19636438
Human Feces	Detected and Quantified	10.15	7.51			nmol/g dry feces	Not Specified	Not Specified	Normal	HMDB	22664055
Human Feces	Detected but not Quantified						Not Specified	Not Specified	Recurrent Clostridium difficile infection	HMDB	24284963
Human Feces	Detected but not Quantified						Not Specified	Not Specified	Recurrent Clostridium difficile infection	HMDB	24284963
Human Feces	Detected but not Quantified						Adult (>18 years old)	Both	Clostridium difficile infection	HMDB	24284963
Human Feces	Detected but not Quantified						Adult (>18 years old)	Both	Normal	HMDB	25037050
Human Feces	Detected but not Quantified						Adult (>18 years old)	Both	Colorectal cancer	HMDB	25037050
Human Feces	Detected but not Quantified						Adult (>18 years old)	Both	Colorectal Cancer	HMDB	27015276
Human Blood	Detected and Quantified	14.8		5.2	25.3	uM	Infant (0-1 year old)	Both	Severe acute malnutrition	HMDB	27163928
Human Blood	Detected and Quantified	0.6		0.4	1.9	uM	Infant (0-1 year old)	Both	Normal	HMDB	27163928
Human Feces	Detected but not Quantified						Adult (>18 years old)	Both	Colorectal Cancer	HMDB	27275383
Human Feces	Detected but not Quantified						Adult (>18 years old)	Both	Normal	HMDB	27543620
Human Feces	Detected but not Quantified						Children (6 - 18 years old)	Not Specified	Crohns disease	HMDB	27609529
Human Feces	Detected but not Quantified						Children (6 - 18 years old)	Not Specified	Ulcerative colitis	HMDB	27609529
Human Feces	Detected but not Quantified						Children (6 - 18 years old)	Not Specified	Unclassified IBD	HMDB	27609529
Human Feces	Detected but not Quantified						Children (6 - 18 years old)	Not Specified	Normal	HMDB	27609529
Human Blood	Detected and Quantified	16	5			uM	Infant (0-1 year old)	Both	GI disorder	HMDB	28521607
Human Blood	Detected and Quantified	3.2	0.6			uM	Infant (0-1 year old)	Both	GI disorder	HMDB	28521607
Human Blood	Detected and Quantified	1.4	0.4			uM	Infant (0-1 year old)	Both	GI disorder	HMDB	28521607
Human Blood	Detected and Quantified	22	6			uM	Infant (0-1 year old)	Both	GI disorder	HMDB	28521607
Human Feces	Detected but not Quantified						Adult (>18 years old)	Both	Normal	HMDB	29808030
Human Blood	Detected but not Quantified						Adult (>18 years old)	Both	Normal	HMDB	32966057
Human Urine	Detected but not Quantified						Adult (>18 years old)	Both	Normal	HMDB	32966057
Human Blood	Detected and Quantified	1.5	1.2			uM	Children (1-13 years old)	Not Specified	Fulminant hepatic failure	HMDB	7119120
Human Blood	Detected and Quantified	25.9	24.0			uM	Children (1-13 years old)	Not Specified	Alpha-1-antitrypsin deficiency	HMDB	7119120
Human Blood	Detected and Quantified	44.0	29.1			uM	Children (1-13 years old)	Not Specified	Extrahepatic biliary atresia (EHBA)	HMDB	7119120
Human Blood	Detected and Quantified	0.7	0.13			uM	Adult (>18 years old)	Both	Celiac Disease	HMDB	3816078
Human Blood	Detected and Quantified	8.4	8.7			uM	Children (1-13 years old)	Not Specified	Cholecohal cyst	HMDB	7119120
Human Blood	Detected and Quantified	14.5	16.1			uM	Children (1-13 years old)	Not Specified	Chronic active hepatitis	HMDB	7119120
Human Blood	Detected and Quantified	9.8	14.7			uM	Children (1-13 years old)	Not Specified	Cystic fibrosis	HMDB	7119120
Human Blood	Detected and Quantified	2.9	2.4			uM	Children (1-13 years old)	Not Specified	Galactosemia	HMDB	7119120
Human Blood	Detected and Quantified	8.6	7.9			uM	Children (1-13 years old)	Not Specified	Glycogen storage disease	HMDB	7119120
Human Blood	Detected and Quantified	43.6	11.8			uM	Adult (>18 years old)	Both	Hepatobiliary Disease	HMDB	16629939
Human Blood	Detected and Quantified	91.8	54.9			uM	Adult (>18 years old)	Not Specified	Intrahepatic biliary hypoplasia	HMDB	7119120
Human Blood	Detected and Quantified	2.8	3.1			uM	Children (1-13 years old)	Not Specified	Idiopathic neonatal hepatitis	HMDB	7119120
Human Blood	Detected and Quantified	10.5	13.1			uM	Children (1-13 years old)	Not Specified	Portal vein obstruction	HMDB	7119120
Human Blood	Detected and Quantified	5.1	6.9			uM	Children (1-13 years old)	Not Specified	Wilson's disease	HMDB	7119120
Human Blood	Detected and Quantified	0.06	0.04			uM	Adult (>18 years old)	Both	Normal	HMDB	3816078
Human Urine	Detected and Quantified	0.42	0.36			umol/mmol creatinine	Adult (>18 years old)	Both	Normal	HMDB	3944741
Human Blood	Detected and Quantified	0.6		0.4	1.9	uM	Infant (0-1 year old)	Both	Normal	HMDB	27163928
Human Blood	Detected and Quantified	0.88	0.26			uM	Children (1-13 years old)	Not Specified	Normal	HMDB	7119120
Human Feces	Detected and Quantified	10.15	7.51			nmol/g dry feces	Not Specified	Not Specified	Normal	HMDB	22664055
Human Fibroblasts	Detected but not Quantified						Not Specified	Not Specified	Normal	HMDB	34986597
Human Liver	Detected but not Quantified						Not Specified	Not Specified	Normal	HMDB	34986597
Human Placenta	Detected but not Quantified						Not Specified	Not Specified	Normal	HMDB	34986597
Human Prostate	Detected but not Quantified						Not Specified	Not Specified	Normal	HMDB	34986597
Human Feces	Detected but not Quantified						Children (6 - 18 years old)	Not Specified	Normal	HMDB	27609529
Human Feces	Detected but not Quantified						Adult (>18 years old)	Both	Normal	HMDB	27543620
Human Feces	Detected but not Quantified						Adult (>18 years old)	Both	Normal	HMDB	25037050
Human Feces	Detected but not Quantified						Adult (>18 years old)	Both	Normal	HMDB	29808030
Human Urine	Detected but not Quantified						Adult (>18 years old)	Both	Normal	HMDB	32966057
Human Blood	Detected but not Quantified						Adult (>18 years old)	Both	Normal	HMDB	32966057

External Links

HMDB ID

HMDB0000138

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FooDB ID

KNApSAcK ID

Chemspider ID

KEGG Compound ID

BioCyc ID

BiGG ID

Not Available

Wikipedia Link

Glycocholic_acid

METLIN ID

Not Available

PubChem Compound

10140

PDB ID

Not Available

ChEBI ID

17687

Food Biomarker Ontology

Not Available

References

Synthesis Reference

Not Available

General References

Spiller RC, Frost PF, Stewart JS, Bloom SR, Silk DB: Delayed postprandial plasma bile acid response in coeliac patients with slow mouth-caecum transit. Clin Sci (Lond). 1987 Feb;72(2):217-23. doi: 10.1042/cs0720217. [PubMed:3816078 ]
Matsui A, Psacharopoulos HT, Mowat AP, Portmann B, Murphy GM: Radioimmunoassay of serum glycocholic acid, standard laboratory tests of liver function and liver biopsy findings: comparative study of children with liver disease. J Clin Pathol. 1982 Sep;35(9):1011-7. doi: 10.1136/jcp.35.9.1011. [PubMed:7119120 ]
Marigold JH, Gilmore IT, Thompson RP: Effects of a meal on plasma clearance of [14C]glycocholic acid and indocyanine green in man. Clin Sci (Lond). 1981 Sep;61(3):325-30. doi: 10.1042/cs0610325. [PubMed:7261553 ]
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Showing metabocard for Glycocholic acid (MMDBc0000040)

MOL for #<Metabolite:0x00007f5abce867f0>

3D MOL for #<Metabolite:0x00007f5abce867f0>

3D SDF for #<Metabolite:0x00007f5abce867f0>

3D-SDF for #<Metabolite:0x00007f5abce867f0>

PDB for #<Metabolite:0x00007f5abce867f0>

3D PDB for #<Metabolite:0x00007f5abce867f0>

SMILES for #<Metabolite:0x00007f5abce867f0>

INCHI for #<Metabolite:0x00007f5abce867f0>

Structure for #<Metabolite:0x00007f5abce867f0>

3D Structure for #<Metabolite:0x00007f5abce867f0>