MiMeDB: Showing metabocard for Deoxyuridine triphosphate (MMDBc0029583)

Record Information

Version

1.0

Status

Detected and Quantified

Creation Date

2021-11-17 23:33:11 UTC

Update Date

2022-08-31 13:52:33 UTC

Metabolite ID

MMDBc0029583

Metabolite Identification

Common Name

Deoxyuridine triphosphate

Description

Deoxyuridine triphosphate is an intermediate in the metabolism of Pyrimidine. It is a substrate for Inosine triphosphate pyrophosphatase, Uridine-cytidine kinase 1, Nucleoside diphosphate kinase 3, Nucleoside diphosphate kinase B, Nucleoside diphosphate kinase 6, Nucleoside diphosphate kinase homolog 5, Nucleoside diphosphate kinase A and Nucleoside diphosphate kinase 7.

Structure

MOL 3D MOL SDF 3D SDF PDB 3D PDB SMILES InChI


  Mrv1652309152004292D          

 28 29  0  0  0  0            999 V2000
 9996.843310001.2960    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
 9995.4118 9998.8201    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
10000.322010000.0585    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
 9999.855810001.9106    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
10001.037610000.4710    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
10001.753310000.0585    0.0000 P   0  0  0  0  0  0  0  0  0  0  0  0
10001.3408 9999.3444    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
10002.1658 9999.3444    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
 9996.842010000.4710    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
 9996.127510000.0585    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
 9996.1275 9999.2334    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
 9996.8420 9998.8210    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
 9997.5565 9999.2334    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
 9997.556510000.0585    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
 9998.9425 9999.9769    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
 9998.275110000.4619    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
 9998.530010001.2465    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
 9999.355010001.2465    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
 9999.609910000.4619    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
10002.467010000.4710    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
10003.182610000.0585    0.0000 P   0  0  0  0  0  0  0  0  0  0  0  0
10002.7701 9999.3444    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
10003.5951 9999.3444    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
10003.896310000.4710    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
10004.612010000.0585    0.0000 P   0  0  0  0  0  0  0  0  0  0  0  0
10005.325610000.4710    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
10004.1995 9999.3444    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
10005.0245 9999.3444    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  3  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  2  0  0  0  0
  6  8  1  0  0  0  0
 11 12  1  0  0  0  0
 12 13  2  0  0  0  0
 16 17  1  0  0  0  0
 17 18  1  0  0  0  0
 18 19  1  0  0  0  0
 15 16  1  0  0  0  0
 15 19  1  0  0  0  0
  9 10  1  0  0  0  0
 10 11  1  0  0  0  0
  9 14  1  0  0  0  0
 13 14  1  0  0  0  0
  1  9  2  0  0  0  0
 11  2  2  0  0  0  0
 16 14  1  1  0  0  0
 19  3  1  1  0  0  0
 18  4  1  6  0  0  0
 20 21  1  0  0  0  0
 21 22  2  0  0  0  0
 21 23  1  0  0  0  0
  6 20  1  0  0  0  0
 24 25  1  0  0  0  0
 25 26  1  0  0  0  0
 25 27  2  0  0  0  0
 25 28  1  0  0  0  0
 21 24  1  0  0  0  0
M  END

HMDB0001191
     RDKit          3D
Deoxyuridine triphosphate
 43 44  0  0  0  0  0  0  0  0999 V2000
    7.7351   -0.6231    1.7480 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.5096   -0.6456    1.4031 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.1298   -0.6243    0.0885 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.7631   -0.6510   -0.2100 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.8636   -0.6942    0.7799 N   0  0  0  0  0  0  0  0  0  0  0  0
    2.4429   -0.6032    0.5263 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.2176    0.9219    0.4457 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.6180    1.0413   -0.9743 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.7145    2.0867   -1.0248 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.9943   -0.3287   -0.9983 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.0376   -0.6309   -2.0678 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8815    0.4823   -1.9771 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2343   -0.0682   -1.1404 P   0  0  0  0  0  5  0  0  0  0  0  0
   -2.1962    0.7153    0.2458 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0380   -1.6695   -0.6653 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7246    0.3036   -1.7505 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7465    0.8818   -0.4824 P   0  0  0  0  0  5  0  0  0  0  0  0
   -4.5055    2.3609   -0.3217 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3990    0.0796    0.9664 O   0  0  0  0  0  0  0  0  0  0  0  0
   -6.3231    0.6177   -0.9410 O   0  0  0  0  0  0  0  0  0  0  0  0
   -7.0692   -0.5811   -0.0042 P   0  0  0  0  0  5  0  0  0  0  0  0
   -8.5199   -0.5991   -0.4227 O   0  0  0  0  0  0  0  0  0  0  0  0
   -6.3959   -2.0973   -0.3121 O   0  0  0  0  0  0  0  0  0  0  0  0
   -6.9728   -0.2960    1.6364 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.0584   -1.1210   -0.7171 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.2750   -0.7146    2.0513 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4623   -0.7578    2.9987 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.5955   -0.6904    2.3689 N   0  0  0  0  0  0  0  0  0  0  0  0
    6.8561   -0.5856   -0.6785 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.4118   -0.6443   -1.2166 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.8675   -1.0525    1.3168 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.1505    1.4880    0.4935 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.4757    1.1680    1.2053 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.4447    1.1046   -1.6808 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4252    2.3224   -0.1014 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.3880   -0.3511    0.0250 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.5521   -0.4268   -3.0436 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4432   -1.5792   -2.0549 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3485   -2.3401   -1.2888 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9472    0.6233    1.6425 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.8965   -2.1476   -1.1514 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.2612    0.6084    1.9166 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.9140   -0.7154    3.3670 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  0
  2  3  1  0
  3  4  2  0
  4  5  1  0
  5  6  1  0
  6  7  1  0
  7  8  1  0
  8  9  1  0
  8 10  1  0
 10 11  1  0
 11 12  1  0
 12 13  1  0
 13 14  2  0
 13 15  1  0
 13 16  1  0
 16 17  1  0
 17 18  2  0
 17 19  1  0
 17 20  1  0
 20 21  1  0
 21 22  2  0
 21 23  1  0
 21 24  1  0
 10 25  1  0
  5 26  1  0
 26 27  2  0
 26 28  1  0
 28  2  1  0
 25  6  1  0
  3 29  1  0
  4 30  1  0
  6 31  1  1
  7 32  1  0
  7 33  1  0
  8 34  1  6
  9 35  1  0
 10 36  1  1
 11 37  1  0
 11 38  1  0
 15 39  1  0
 19 40  1  0
 23 41  1  0
 24 42  1  0
 28 43  1  0
M  END


  Mrv1652309152004292D          

 28 29  0  0  0  0            999 V2000
 9996.843310001.2960    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
 9995.4118 9998.8201    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
10000.322010000.0585    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
 9999.855810001.9106    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
10001.037610000.4710    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
10001.753310000.0585    0.0000 P   0  0  0  0  0  0  0  0  0  0  0  0
10001.3408 9999.3444    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
10002.1658 9999.3444    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
 9996.842010000.4710    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
 9996.127510000.0585    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
 9996.1275 9999.2334    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
 9996.8420 9998.8210    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
 9997.5565 9999.2334    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
 9997.556510000.0585    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
 9998.9425 9999.9769    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
 9998.275110000.4619    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
 9998.530010001.2465    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
 9999.355010001.2465    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
 9999.609910000.4619    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
10002.467010000.4710    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
10003.182610000.0585    0.0000 P   0  0  0  0  0  0  0  0  0  0  0  0
10002.7701 9999.3444    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
10003.5951 9999.3444    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
10003.896310000.4710    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
10004.612010000.0585    0.0000 P   0  0  0  0  0  0  0  0  0  0  0  0
10005.325610000.4710    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
10004.1995 9999.3444    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
10005.0245 9999.3444    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  3  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  2  0  0  0  0
  6  8  1  0  0  0  0
 11 12  1  0  0  0  0
 12 13  2  0  0  0  0
 16 17  1  0  0  0  0
 17 18  1  0  0  0  0
 18 19  1  0  0  0  0
 15 16  1  0  0  0  0
 15 19  1  0  0  0  0
  9 10  1  0  0  0  0
 10 11  1  0  0  0  0
  9 14  1  0  0  0  0
 13 14  1  0  0  0  0
  1  9  2  0  0  0  0
 11  2  2  0  0  0  0
 16 14  1  1  0  0  0
 19  3  1  1  0  0  0
 18  4  1  6  0  0  0
 20 21  1  0  0  0  0
 21 22  2  0  0  0  0
 21 23  1  0  0  0  0
  6 20  1  0  0  0  0
 24 25  1  0  0  0  0
 25 26  1  0  0  0  0
 25 27  2  0  0  0  0
 25 28  1  0  0  0  0
 21 24  1  0  0  0  0
M  END
> <DATABASE_ID>
MMDBc0029583

> <DATABASE_NAME>
MIME

> <SMILES>
O[C@H]1C[C@@H](O[C@@H]1COP(O)(=O)OP(O)(=O)OP(O)(O)=O)N1C=CC(=O)NC1=O

> <INCHI_IDENTIFIER>
InChI=1S/C9H15N2O14P3/c12-5-3-8(11-2-1-7(13)10-9(11)14)23-6(5)4-22-27(18,19)25-28(20,21)24-26(15,16)17/h1-2,5-6,8,12H,3-4H2,(H,18,19)(H,20,21)(H,10,13,14)(H2,15,16,17)/t5-,6+,8+/m0/s1

> <INCHI_KEY>
AHCYMLUZIRLXAA-SHYZEUOFSA-N

> <FORMULA>
C9H15N2O14P3

> <MOLECULAR_WEIGHT>
468.1417

> <EXACT_MASS>
467.973612734

> <JCHEM_ACCEPTOR_COUNT>
11

> <JCHEM_ATOM_COUNT>
43

> <JCHEM_AVERAGE_POLARIZABILITY>
34.62232591208335

> <JCHEM_BIOAVAILABILITY>
0

> <JCHEM_DONOR_COUNT>
6

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
({[({[(2R,3S,5R)-5-(2,4-dioxo-1,2,3,4-tetrahydropyrimidin-1-yl)-3-hydroxyoxolan-2-yl]methoxy}(hydroxy)phosphoryl)oxy](hydroxy)phosphoryl}oxy)phosphonic acid

> <ALOGPS_LOGP>
-0.12

> <JCHEM_LOGP>
-2.481767067999999

> <ALOGPS_LOGS>
-1.73

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
2

> <JCHEM_PHYSIOLOGICAL_CHARGE>
-3

> <JCHEM_PKA>
2.5314813358820283

> <JCHEM_PKA_STRONGEST_ACIDIC>
0.895283016694572

> <JCHEM_PKA_STRONGEST_BASIC>
-3.2403441558865627

> <JCHEM_POLAR_SURFACE_AREA>
238.68999999999997

> <JCHEM_REFRACTIVITY>
83.67359999999998

> <JCHEM_ROTATABLE_BOND_COUNT>
8

> <JCHEM_RULE_OF_FIVE>
0

> <ALOGPS_SOLUBILITY>
8.63e+00 g/l

> <JCHEM_TRADITIONAL_IUPAC>
dUTP

> <JCHEM_VEBER_RULE>
0

$$$$

HMDB0001191
     RDKit          3D
Deoxyuridine triphosphate
 43 44  0  0  0  0  0  0  0  0999 V2000
    7.7351   -0.6231    1.7480 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.5096   -0.6456    1.4031 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.1298   -0.6243    0.0885 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.7631   -0.6510   -0.2100 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.8636   -0.6942    0.7799 N   0  0  0  0  0  0  0  0  0  0  0  0
    2.4429   -0.6032    0.5263 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.2176    0.9219    0.4457 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.6180    1.0413   -0.9743 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.7145    2.0867   -1.0248 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.9943   -0.3287   -0.9983 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.0376   -0.6309   -2.0678 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8815    0.4823   -1.9771 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2343   -0.0682   -1.1404 P   0  0  0  0  0  5  0  0  0  0  0  0
   -2.1962    0.7153    0.2458 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0380   -1.6695   -0.6653 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7246    0.3036   -1.7505 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7465    0.8818   -0.4824 P   0  0  0  0  0  5  0  0  0  0  0  0
   -4.5055    2.3609   -0.3217 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3990    0.0796    0.9664 O   0  0  0  0  0  0  0  0  0  0  0  0
   -6.3231    0.6177   -0.9410 O   0  0  0  0  0  0  0  0  0  0  0  0
   -7.0692   -0.5811   -0.0042 P   0  0  0  0  0  5  0  0  0  0  0  0
   -8.5199   -0.5991   -0.4227 O   0  0  0  0  0  0  0  0  0  0  0  0
   -6.3959   -2.0973   -0.3121 O   0  0  0  0  0  0  0  0  0  0  0  0
   -6.9728   -0.2960    1.6364 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.0584   -1.1210   -0.7171 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.2750   -0.7146    2.0513 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4623   -0.7578    2.9987 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.5955   -0.6904    2.3689 N   0  0  0  0  0  0  0  0  0  0  0  0
    6.8561   -0.5856   -0.6785 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.4118   -0.6443   -1.2166 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.8675   -1.0525    1.3168 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.1505    1.4880    0.4935 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.4757    1.1680    1.2053 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.4447    1.1046   -1.6808 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4252    2.3224   -0.1014 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.3880   -0.3511    0.0250 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.5521   -0.4268   -3.0436 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4432   -1.5792   -2.0549 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3485   -2.3401   -1.2888 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9472    0.6233    1.6425 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.8965   -2.1476   -1.1514 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.2612    0.6084    1.9166 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.9140   -0.7154    3.3670 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  0
  2  3  1  0
  3  4  2  0
  4  5  1  0
  5  6  1  0
  6  7  1  0
  7  8  1  0
  8  9  1  0
  8 10  1  0
 10 11  1  0
 11 12  1  0
 12 13  1  0
 13 14  2  0
 13 15  1  0
 13 16  1  0
 16 17  1  0
 17 18  2  0
 17 19  1  0
 17 20  1  0
 20 21  1  0
 21 22  2  0
 21 23  1  0
 21 24  1  0
 10 25  1  0
  5 26  1  0
 26 27  2  0
 26 28  1  0
 28  2  1  0
 25  6  1  0
  3 29  1  0
  4 30  1  0
  6 31  1  1
  7 32  1  0
  7 33  1  0
  8 34  1  6
  9 35  1  0
 10 36  1  1
 11 37  1  0
 11 38  1  0
 15 39  1  0
 19 40  1  0
 23 41  1  0
 24 42  1  0
 28 43  1  0
M  END

HEADER    PROTEIN                                 15-SEP-20   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   15-SEP-20         0                                  
HETATM    1  O   UNK     0    8660.7748669.086   0.000  0.00  0.00           O+0
HETATM    2  O   UNK     0    8658.1028664.464   0.000  0.00  0.00           O+0
HETATM    3  C   UNK     0    8667.2688666.776   0.000  0.00  0.00           C+0
HETATM    4  O   UNK     0    8666.3978670.233   0.000  0.00  0.00           O+0
HETATM    5  O   UNK     0    8668.6048667.546   0.000  0.00  0.00           O+0
HETATM    6  P   UNK     0    8669.9398666.776   0.000  0.00  0.00           P+0
HETATM    7  O   UNK     0    8669.1698665.443   0.000  0.00  0.00           O+0
HETATM    8  O   UNK     0    8670.7098665.443   0.000  0.00  0.00           O+0
HETATM    9  C   UNK     0    8660.7728667.546   0.000  0.00  0.00           C+0
HETATM   10  N   UNK     0    8659.4388666.776   0.000  0.00  0.00           N+0
HETATM   11  C   UNK     0    8659.4388665.236   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0    8660.7728664.466   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0    8662.1058665.236   0.000  0.00  0.00           C+0
HETATM   14  N   UNK     0    8662.1058666.776   0.000  0.00  0.00           N+0
HETATM   15  O   UNK     0    8664.6938666.624   0.000  0.00  0.00           O+0
HETATM   16  C   UNK     0    8663.4478667.529   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0    8663.9238668.993   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0    8665.4638668.993   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0    8665.9388667.529   0.000  0.00  0.00           C+0
HETATM   20  O   UNK     0    8671.2728667.546   0.000  0.00  0.00           O+0
HETATM   21  P   UNK     0    8672.6088666.776   0.000  0.00  0.00           P+0
HETATM   22  O   UNK     0    8671.8388665.443   0.000  0.00  0.00           O+0
HETATM   23  O   UNK     0    8673.3788665.443   0.000  0.00  0.00           O+0
HETATM   24  O   UNK     0    8673.9408667.546   0.000  0.00  0.00           O+0
HETATM   25  P   UNK     0    8675.2768666.776   0.000  0.00  0.00           P+0
HETATM   26  O   UNK     0    8676.6088667.546   0.000  0.00  0.00           O+0
HETATM   27  O   UNK     0    8674.5068665.443   0.000  0.00  0.00           O+0
HETATM   28  O   UNK     0    8676.0468665.443   0.000  0.00  0.00           O+0
CONECT    1    9                                                            
CONECT    2   11                                                            
CONECT    3    5   19                                                       
CONECT    4   18                                                            
CONECT    5    3    6                                                       
CONECT    6    5    7    8   20                                             
CONECT    7    6                                                            
CONECT    8    6                                                            
CONECT    9   10   14    1                                                  
CONECT   10    9   11                                                       
CONECT   11   12   10    2                                                  
CONECT   12   11   13                                                       
CONECT   13   12   14                                                       
CONECT   14    9   13   16                                                  
CONECT   15   16   19                                                       
CONECT   16   17   15   14                                                  
CONECT   17   16   18                                                       
CONECT   18   17   19    4                                                  
CONECT   19   18   15    3                                                  
CONECT   20   21    6                                                       
CONECT   21   20   22   23   24                                             
CONECT   22   21                                                            
CONECT   23   21                                                            
CONECT   24   25   21                                                       
CONECT   25   24   26   27   28                                             
CONECT   26   25                                                            
CONECT   27   25                                                            
CONECT   28   25                                                            
MASTER        0    0    0    0    0    0    0    0   28    0   58    0
END

COMPND    HMDB0001191
HETATM    1  O1  UNL     1       7.735  -0.623   1.748  1.00  0.00           O  
HETATM    2  C1  UNL     1       6.510  -0.646   1.403  1.00  0.00           C  
HETATM    3  C2  UNL     1       6.130  -0.624   0.089  1.00  0.00           C  
HETATM    4  C3  UNL     1       4.763  -0.651  -0.210  1.00  0.00           C  
HETATM    5  N1  UNL     1       3.864  -0.694   0.780  1.00  0.00           N  
HETATM    6  C4  UNL     1       2.443  -0.603   0.526  1.00  0.00           C  
HETATM    7  C5  UNL     1       2.218   0.922   0.446  1.00  0.00           C  
HETATM    8  C6  UNL     1       1.618   1.041  -0.974  1.00  0.00           C  
HETATM    9  O2  UNL     1       0.714   2.087  -1.025  1.00  0.00           O  
HETATM   10  C7  UNL     1       0.994  -0.329  -0.998  1.00  0.00           C  
HETATM   11  C8  UNL     1       0.038  -0.631  -2.068  1.00  0.00           C  
HETATM   12  O3  UNL     1      -0.881   0.482  -1.977  1.00  0.00           O  
HETATM   13  P1  UNL     1      -2.234  -0.068  -1.140  1.00  0.00           P  
HETATM   14  O4  UNL     1      -2.196   0.715   0.246  1.00  0.00           O  
HETATM   15  O5  UNL     1      -2.038  -1.669  -0.665  1.00  0.00           O  
HETATM   16  O6  UNL     1      -3.725   0.304  -1.751  1.00  0.00           O  
HETATM   17  P2  UNL     1      -4.746   0.882  -0.482  1.00  0.00           P  
HETATM   18  O7  UNL     1      -4.506   2.361  -0.322  1.00  0.00           O  
HETATM   19  O8  UNL     1      -4.399   0.080   0.966  1.00  0.00           O  
HETATM   20  O9  UNL     1      -6.323   0.618  -0.941  1.00  0.00           O  
HETATM   21  P3  UNL     1      -7.069  -0.581  -0.004  1.00  0.00           P  
HETATM   22  O10 UNL     1      -8.520  -0.599  -0.423  1.00  0.00           O  
HETATM   23  O11 UNL     1      -6.396  -2.097  -0.312  1.00  0.00           O  
HETATM   24  O12 UNL     1      -6.973  -0.296   1.636  1.00  0.00           O  
HETATM   25  O13 UNL     1       2.058  -1.121  -0.717  1.00  0.00           O  
HETATM   26  C9  UNL     1       4.275  -0.715   2.051  1.00  0.00           C  
HETATM   27  O14 UNL     1       3.462  -0.758   2.999  1.00  0.00           O  
HETATM   28  N2  UNL     1       5.596  -0.690   2.369  1.00  0.00           N  
HETATM   29  H1  UNL     1       6.856  -0.586  -0.679  1.00  0.00           H  
HETATM   30  H2  UNL     1       4.412  -0.644  -1.217  1.00  0.00           H  
HETATM   31  H3  UNL     1       1.867  -1.053   1.317  1.00  0.00           H  
HETATM   32  H4  UNL     1       3.150   1.488   0.494  1.00  0.00           H  
HETATM   33  H5  UNL     1       1.476   1.168   1.205  1.00  0.00           H  
HETATM   34  H6  UNL     1       2.445   1.105  -1.681  1.00  0.00           H  
HETATM   35  H7  UNL     1       0.425   2.322  -0.101  1.00  0.00           H  
HETATM   36  H8  UNL     1       0.388  -0.351   0.025  1.00  0.00           H  
HETATM   37  H9  UNL     1       0.552  -0.427  -3.044  1.00  0.00           H  
HETATM   38  H10 UNL     1      -0.443  -1.579  -2.055  1.00  0.00           H  
HETATM   39  H11 UNL     1      -2.348  -2.340  -1.289  1.00  0.00           H  
HETATM   40  H12 UNL     1      -3.947   0.623   1.643  1.00  0.00           H  
HETATM   41  H13 UNL     1      -5.897  -2.148  -1.151  1.00  0.00           H  
HETATM   42  H14 UNL     1      -7.261   0.608   1.917  1.00  0.00           H  
HETATM   43  H15 UNL     1       5.914  -0.715   3.367  1.00  0.00           H  
CONECT    1    2    2
CONECT    2    3   28
CONECT    3    4    4   29
CONECT    4    5   30
CONECT    5    6   26
CONECT    6    7   25   31
CONECT    7    8   32   33
CONECT    8    9   10   34
CONECT    9   35
CONECT   10   11   25   36
CONECT   11   12   37   38
CONECT   12   13
CONECT   13   14   14   15   16
CONECT   15   39
CONECT   16   17
CONECT   17   18   18   19   20
CONECT   19   40
CONECT   20   21
CONECT   21   22   22   23   24
CONECT   23   41
CONECT   24   42
CONECT   26   27   27   28
CONECT   28   43
END

HMDB0001191
     RDKit          3D
Deoxyuridine triphosphate
 43 44  0  0  0  0  0  0  0  0999 V2000
    7.7351   -0.6231    1.7480 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.5096   -0.6456    1.4031 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.1298   -0.6243    0.0885 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.7631   -0.6510   -0.2100 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.8636   -0.6942    0.7799 N   0  0  0  0  0  0  0  0  0  0  0  0
    2.4429   -0.6032    0.5263 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.2176    0.9219    0.4457 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.6180    1.0413   -0.9743 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.7145    2.0867   -1.0248 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.9943   -0.3287   -0.9983 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.0376   -0.6309   -2.0678 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8815    0.4823   -1.9771 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2343   -0.0682   -1.1404 P   0  0  0  0  0  5  0  0  0  0  0  0
   -2.1962    0.7153    0.2458 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0380   -1.6695   -0.6653 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7246    0.3036   -1.7505 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7465    0.8818   -0.4824 P   0  0  0  0  0  5  0  0  0  0  0  0
   -4.5055    2.3609   -0.3217 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3990    0.0796    0.9664 O   0  0  0  0  0  0  0  0  0  0  0  0
   -6.3231    0.6177   -0.9410 O   0  0  0  0  0  0  0  0  0  0  0  0
   -7.0692   -0.5811   -0.0042 P   0  0  0  0  0  5  0  0  0  0  0  0
   -8.5199   -0.5991   -0.4227 O   0  0  0  0  0  0  0  0  0  0  0  0
   -6.3959   -2.0973   -0.3121 O   0  0  0  0  0  0  0  0  0  0  0  0
   -6.9728   -0.2960    1.6364 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.0584   -1.1210   -0.7171 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.2750   -0.7146    2.0513 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4623   -0.7578    2.9987 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.5955   -0.6904    2.3689 N   0  0  0  0  0  0  0  0  0  0  0  0
    6.8561   -0.5856   -0.6785 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.4118   -0.6443   -1.2166 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.8675   -1.0525    1.3168 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.1505    1.4880    0.4935 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.4757    1.1680    1.2053 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.4447    1.1046   -1.6808 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4252    2.3224   -0.1014 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.3880   -0.3511    0.0250 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.5521   -0.4268   -3.0436 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4432   -1.5792   -2.0549 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3485   -2.3401   -1.2888 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9472    0.6233    1.6425 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.8965   -2.1476   -1.1514 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.2612    0.6084    1.9166 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.9140   -0.7154    3.3670 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  0
  2  3  1  0
  3  4  2  0
  4  5  1  0
  5  6  1  0
  6  7  1  0
  7  8  1  0
  8  9  1  0
  8 10  1  0
 10 11  1  0
 11 12  1  0
 12 13  1  0
 13 14  2  0
 13 15  1  0
 13 16  1  0
 16 17  1  0
 17 18  2  0
 17 19  1  0
 17 20  1  0
 20 21  1  0
 21 22  2  0
 21 23  1  0
 21 24  1  0
 10 25  1  0
  5 26  1  0
 26 27  2  0
 26 28  1  0
 28  2  1  0
 25  6  1  0
  3 29  1  0
  4 30  1  0
  6 31  1  1
  7 32  1  0
  7 33  1  0
  8 34  1  6
  9 35  1  0
 10 36  1  1
 11 37  1  0
 11 38  1  0
 15 39  1  0
 19 40  1  0
 23 41  1  0
 24 42  1  0
 28 43  1  0
M  END

Synonyms

Value	Source
2'-Deoxyuridine 5'-triphosphate	ChEBI
2'-Deoxyuridine 5'-triphosphoric acid	Generator
Deoxyuridine triphosphoric acid	Generator
2'-Deoxyuridine-5'-triphosphorate	HMDB
2'-Deoxyuridine-5'-triphosphoric acid	HMDB
2'-Deoxyuridine-5'-triphosphoric acid = dUTP	HMDB
Deoxy-UTP	HMDB
Deoxyuridine-5'-triphosphate	HMDB
dUTP	HMDB
2'-Deoxyuridine 5'-(tetrahydrogen triphosphate)	HMDB
2'-deoxy-UTP	HMDB
2’-Deoxyuridine 5’-(tetrahydrogen triphosphate)	HMDB
2’-Deoxyuridine 5’-triphosphate	HMDB
2’-deoxy-UTP	HMDB
Deoxyuridine 5'-triphosphate	HMDB
Deoxyuridine 5’-triphosphate	HMDB
Deoxyuridine triphosphate	HMDB

Molecular Formula

C₉H₁₅N₂O₁₄P₃

Average Mass

468.1417

Monoisotopic Mass

467.973612734

IUPAC Name

({[({[(2R,3S,5R)-5-(2,4-dioxo-1,2,3,4-tetrahydropyrimidin-1-yl)-3-hydroxyoxolan-2-yl]methoxy}(hydroxy)phosphoryl)oxy](hydroxy)phosphoryl}oxy)phosphonic acid

Traditional Name

dUTP

CAS Registry Number

1173-82-6

SMILES

O[C@H]1C[C@@H](O[C@@H]1COP(O)(=O)OP(O)(=O)OP(O)(O)=O)N1C=CC(=O)NC1=O

InChI Identifier

InChI=1S/C9H15N2O14P3/c12-5-3-8(11-2-1-7(13)10-9(11)14)23-6(5)4-22-27(18,19)25-28(20,21)24-26(15,16)17/h1-2,5-6,8,12H,3-4H2,(H,18,19)(H,20,21)(H,10,13,14)(H2,15,16,17)/t5-,6+,8+/m0/s1

InChI Key

AHCYMLUZIRLXAA-SHYZEUOFSA-N

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as pyrimidine 2'-deoxyribonucleoside triphosphates. These are pyrimidine nucleotides with a triphosphate group linked to the ribose moiety lacking a hydroxyl group at position 2.

Kingdom

Organic compounds

Super Class

Nucleosides, nucleotides, and analogues

Class

Pyrimidine nucleotides

Sub Class

Pyrimidine deoxyribonucleotides

Direct Parent

Pyrimidine 2'-deoxyribonucleoside triphosphates

Alternative Parents

Substituents

Pyrimidine 2'-deoxyribonucleoside triphosphate
Pyrimidone
Monoalkyl phosphate
Hydroxypyrimidine
Hydropyrimidine
Organic phosphoric acid derivative
Phosphoric acid ester
Pyrimidine
Alkyl phosphate
Tetrahydrofuran
Heteroaromatic compound
Secondary alcohol
Organoheterocyclic compound
Azacycle
Oxacycle
Organopnictogen compound
Organonitrogen compound
Organic oxygen compound
Organic nitrogen compound
Alcohol
Organooxygen compound
Hydrocarbon derivative
Organic oxide
Aromatic heteromonocyclic compound

Molecular Framework

Aromatic heteromonocyclic compounds

External Descriptors

pyrimidine 2'-deoxyribonucleoside 5'-triphosphate (CHEBI:17625 )
deoxyuridine phosphate (CHEBI:17625 )
Deoxyribonucleotides (C00460 )

Functional Ontology

Not Available

Physical Properties

State

Solid

Predicted Properties

Property	Value	Source
Water Solubility	8.63 g/L	ALOGPS
logP	-0.12	ALOGPS
logP	-2.5	ChemAxon
logS	-1.7	ALOGPS
pKa (Strongest Acidic)	0.9	ChemAxon
pKa (Strongest Basic)	-3.2	ChemAxon
Physiological Charge	-3	ChemAxon
Hydrogen Acceptor Count	11	ChemAxon
Hydrogen Donor Count	6	ChemAxon
Polar Surface Area	238.69 Å²	ChemAxon
Rotatable Bond Count	8	ChemAxon
Refractivity	83.67 m³·mol⁻¹	ChemAxon
Polarizability	34.62 Å³	ChemAxon
Number of Rings	2	ChemAxon
Bioavailability	No	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

Spectra

Spectrum Type	Description	Splash Key	Deposition Date	View
Predicted GC-MS	Predicted GC-MS Spectrum - GC-MS (Non-derivatized) - 70eV, Positive	splash10-0a4j-8963100000-15f9b7594aa45581dcc0	2017-09-01	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - GC-MS (1 TMS) - 70eV, Positive	splash10-05be-9551020000-12e307f13199997c5947	2017-10-06	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - GC-MS (Non-derivatized) - 70eV, Positive	Not Available	2021-10-12	View Spectrum
LC-MS/MS	LC-MS/MS Spectrum - 10V, Negative	splash10-014i-0100900000-8e7a148aec1d751cc1c4	2021-09-20	View Spectrum
LC-MS/MS	LC-MS/MS Spectrum - 40V, Negative	splash10-0a6r-4911000000-4e7687aefa9b30fe654c	2021-09-20	View Spectrum
LC-MS/MS	LC-MS/MS Spectrum - 20V, Negative	splash10-0aor-0913400000-108f05d6274de41c6fbc	2021-09-20	View Spectrum
LC-MS/MS	LC-MS/MS Spectrum - 35V, Negative	splash10-0a4i-1922000000-1891134d52577ca759f0	2021-09-20	View Spectrum
LC-MS/MS	LC-MS/MS Spectrum - 35V, Positive	splash10-001i-9000000000-192f049c7d1787f75c4c	2021-09-20	View Spectrum
LC-MS/MS	LC-MS/MS Spectrum - 35V, Positive	splash10-001i-9000000000-57fd03e21769cf32cb69	2021-09-20	View Spectrum
LC-MS/MS	LC-MS/MS Spectrum - 35V, Negative	splash10-0a4i-1922000000-489aaa48942eed69703b	2021-09-20	View Spectrum
LC-MS/MS	LC-MS/MS Spectrum - 35V, Positive	splash10-001i-9000000000-f4b40a8824847f5ca8a7	2021-09-20	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 10V, Positive	splash10-03di-0900000000-9dfd5f9811270d9aaab8	2015-09-15	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 20V, Positive	splash10-03di-3911000000-b480c4f463f71544be8f	2015-09-15	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 40V, Positive	splash10-03di-5900000000-2ba3b00121251c9adda0	2015-09-15	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 10V, Negative	splash10-01b9-3120900000-dedbedae66448a647f3b	2015-09-15	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 20V, Negative	splash10-057u-9430100000-0b81cc8084e6bd0f3088	2015-09-15	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 40V, Negative	splash10-056r-9510000000-a72cd2e823cab077b0e1	2015-09-15	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 10V, Negative	splash10-014i-0003900000-eff09a2f41b2c9e59343	2021-09-24	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 20V, Negative	splash10-004i-9715400000-83fd98a60651b67d2aea	2021-09-24	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 40V, Negative	splash10-004i-9201000000-c6b0a4a5f0bb84bc1987	2021-09-24	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 10V, Positive	splash10-03di-2900200000-ad484f076fd7c4b32fb9	2021-09-24	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 20V, Positive	splash10-03di-9701100000-04958af5fb614287d4a0	2021-09-24	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 40V, Positive	splash10-03di-0910000000-52122719a1b16858a2a0	2021-09-24	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, D₂O, predicted)		2021-09-29	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 100 MHz, D₂O, predicted)		2021-09-29	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, D₂O, predicted)		2021-09-29	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 1000 MHz, D₂O, predicted)		2021-09-29	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, D₂O, predicted)		2021-09-29	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 200 MHz, D₂O, predicted)		2021-09-29	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, D₂O, predicted)		2021-09-29	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 300 MHz, D₂O, predicted)		2021-09-29	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, D₂O, predicted)		2021-09-29	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 400 MHz, D₂O, predicted)		2021-09-29	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, D₂O, predicted)		2021-09-29	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 500 MHz, D₂O, predicted)		2021-09-29	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, D₂O, predicted)		2021-09-29	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 600 MHz, D₂O, predicted)		2021-09-29	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, D₂O, predicted)		2021-09-29	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 700 MHz, D₂O, predicted)		2021-09-29	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, D₂O, predicted)		2021-09-29	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 800 MHz, D₂O, predicted)		2021-09-29	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, D₂O, predicted)		2021-09-29	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 900 MHz, D₂O, predicted)		2021-09-29	View Spectrum

Biological Properties

Cellular Locations

Mitochondria
Nucleus

Biospecimen Locations

Epidermis
Feces
Prostate
Prostate Tissue
Skeletal Muscle
Spleen

Tissue Locations

Epidermis
Prostate
Skeletal Muscle
Spleen

Associated OMIM IDs

114500 (Colorectal cancer)
610247 (Eosinophilic esophagitis)

Human Proteins and Enzymes

Protein ID	Protein Name	Protein Type	Uniprot ID	Species
MMDBp0191778	Uridine-cytidine kinase 1	Unknown	Q9HA47	Homo sapiens
MMDBp0191779	Nucleoside diphosphate kinase, mitochondrial	Unknown	O00746	Homo sapiens
MMDBp0191781	Nucleoside diphosphate kinase A	Unknown	P15531	Homo sapiens
MMDBp0191782	Nucleoside diphosphate kinase 7	Unknown	Q9Y5B8	Homo sapiens
MMDBp0191784	Nucleoside diphosphate kinase B	Unknown	P22392	Homo sapiens
MMDBp0191785	Nucleoside diphosphate kinase 3	Unknown	Q13232	Homo sapiens
MMDBp0191786	Nucleoside diphosphate kinase 6	Unknown	O75414	Homo sapiens
MMDBp0192097	Inosine triphosphate pyrophosphatase	Unknown	Q9BY32	Homo sapiens
MMDBp0192098	Deoxyuridine 5'-triphosphate nucleotidohydrolase, mitochondrial	Unknown	P33316	Homo sapiens
MMDBp0193590	Uridine-cytidine kinase 2	Unknown	Q9BZX2	Homo sapiens
MMDBp0194185	Uridine-cytidine kinase-like 1	Enzyme	Q9NWZ5	Homo sapiens
MMDBp0196906	Nucleoside diphosphate kinase homolog 5	Unknown	P56597

Human Pathways

Pathways

Name	SMPDB/PathBank

Metabolic Reactions

Reaction ID	Precursor	Product	Enzyme	Reaction Type	Data Source	Reference
MMDBr0000754	dTDP	dTDP	Solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19	Transport of dUTP via dTDP Antiport	VMH	11226231
MMDBr0000755	dUDP	dUDP	Solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19	Transport of dUTP via dUDP Antiport	VMH	11226231
MMDBr0000756	dGDP	dGDP	Solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19	Transport of dUTP via dGDP Antiport	VMH	11226231
MMDBr0000758	dADP	dADP	Solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19	Transport of dUTP via dADP Antiport	VMH	11226231
MMDBr0000759	dCDP	dCDP	Solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19	Transport of dUTP via dCDP Antiport	VMH	11226231
MMDBr0000760	ADP	ADP	Solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19	Transport of dUTP via ADP Antiport	VMH	11226231
MMDBr0000761	Adenosine triphosphate	Adenosine triphosphate	Solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19	Transport of dUTP via ATP Antiport	VMH	11226231
MMDBr0000839	Deoxyuridine triphosphate	dUMP	Deoxyuridine triphosphatase	DUTP Diphosphatase	VMH	12799180 8631816 9070952
MMDBr0000840	Deoxyuridine triphosphate	dUMP	Deoxyuridine triphosphatase	DUTP Diphosphatase, Nuclear	VMH	12799180 8631816 9070952
MMDBr0001745	Adenosine triphosphate	ADP	Nme/nm23 nucleoside diphosphate kinase 4	Nucleoside-Diphosphate Kinase (ATP:dUDP), Mitochondrial	VMH	30371894
MMDBr0001746	Adenosine triphosphate	ADP	Nme/nm23 nucleoside diphosphate kinase 1	Nucleoside-Diphosphate Kinase (ATP:dUDP), Nuclear	VMH	30371894
MMDBr0002585	Cytidine	Cytidine monophosphate	Uridine-cytidine kinase 1	DUTP:Cytidine 5-Phosphotransferase	VMH	11306702 9923963
MMDBr0002867	Deoxyuridine triphosphate	dUDP	Uridine-cytidine kinase 1	DUTP:Uridine 5-Phosphotransferase	VMH	11306702 11494055 64250 9923963
MMDBr0007302	dCTP	Deoxyuridine triphosphate	Not Available	DCTP deaminase	VMH	30371894
MMDBr0007325	Deoxyuridine triphosphate	dUMP	Not Available	DUTP Diphosphatase	VMH	30371894
MMDBr0007503	Adenosine triphosphate	ADP	Not Available	Nucleoside-Diphosphate Kinase (ATP:dUDP)	VMH	30371894
MMDBr0007998	Cytidine	Cytidine monophosphate	Not Available	Cytidine kinase (dUTP:Cytidine)	VMH	30371894
MMDBr0008005	Deoxyuridine triphosphate	dUDP	Not Available	Uridine kinase (dUTP:Uridine)	VMH	30371894
MMDBr0010294	dCTP	Deoxyuridine triphosphate	Not Available	DCTP Deaminase	VMH	30371894
MMDBr0010874	Adenosine monophosphate	ADP	Not Available	Adenylate kinase (dUTP)	VMH	30371894
MMDBr0012876	Deoxyuridine triphosphate	diphosphate	Probable deoxyuridine 5'-triphosphate nucleotidohydrolase	Dephosphorylation; Hydrolysis of bond	RHEA	34755880
MMDBr0014236	dCTP	Deoxyuridine triphosphate	dCTP deaminase	Deamination	RHEA	34755880
MMDBr0018623	Adenosine triphosphate	Deoxyuridine triphosphate	Nucleoside diphosphate kinase	Phosphorylation	PathBank	31602464
MMDBr0018624	Water	Hydrogen Ion	Deoxyuridine 5'-triphosphate nucleotidohydrolase	Hydrolysis of bond	PathBank	31602464
MMDBr0018628	Uridine triphosphate	Water	Anaerobic ribonucleoside-triphosphate reductase	Reduction	PathBank	31602464
MMDBr0018630	Hydrogen Ion	Deoxyuridine triphosphate	dCTP deaminase	Deamination	PathBank	31602464
MMDBr0019796	Adenosine triphosphate	Deoxyuridine triphosphate	Not Available		PathBank	31602464
MMDBr0019797	Water	Hydrogen Ion	Not Available		PathBank	31602464
MMDBr0019800	Uridine triphosphate	Water	Not Available		PathBank	31602464
MMDBr0019803	Hydrogen Ion	Deoxyuridine triphosphate	Not Available		PathBank	31602464
MMDBr0026026	Water	L-Cysteine	Probable adenosylcobalamin-dependent ribonucleoside-triphosphate reductase	Reduction	RHEA	34755880
MMDBr0026085	Deoxyuridine-5'-diphosphate	Deoxyuridine triphosphate	Nucleoside diphosphate kinase	Phosphorylation	RHEA	34755880
MMDBr0026089	Deoxyuridine triphosphate	2'-Deoxyuridine 5'-phosphate	Nucleoside triphosphate pyrophosphatase	Purine metabolism and pyrimidine metabolism; Hydrolysis of pyrophosphate; Dephosphorylation	RHEA	34755880
MMDBr0026093	Deoxyuridine triphosphate	2'-Deoxyuridine 5'-phosphate	Inosine triphosphate pyrophosphatase	Purine metabolism and pyrimidine metabolism	RHEA	34755880
MMDBr0026110	Uridine triphosphate	Deoxyuridine triphosphate	Anaerobic ribonucleoside-triphosphate reductase	Reduction	RHEA	34755880

Health Effects and Bioactivity

Health Outcome/Bioactivity	Metabolite Response/Effect	Evidence Type	Host and Biospecimen	Data Source	Reference
Prostate cancer		Association	Human Prostate Tissue	HMDB	19212411

Microbial Sources

Superkingdom/Kingdom	Phylum	Total species	Hosts and Body Sites	Microbial Links
Bacteria	Proteobacteria	522	Human feces; Human sputum; Human ; Human unknown; Pig ; Human pleural fluid plaque; Human dental plaque; Human nasal swab; Human stool; Human feces; pleural fluid plaque; bal; Cattle ; River trout ; Turkey ; Dog ; Lion ; Chicken ; American dog tick	Unknown; Metabolic reconstruction
Bacteria	Firmicutes	404	Human feces; Human pleural fluid plaque; Pig ; Human sputum; Human ; Human subgingival plaque; Human saliva; Human urine; Human mucosa; Human supragingival plaque; Cattle ; Human stool; Goat feces; Sheep feces	Metabolic reconstruction
Bacteria	Actinobacteria	157	Human feces; Human sputum; Human bronchial brush; Human nasopharyngeal swab; Human pleural fluid plaque; Human dental plaque; Human ; Human mucosa; Human supragingival plaque; Human subgingival plaque; Human saliva; Cattle	Metabolic reconstruction
Bacteria	Verrucomicrobia	2	Human ; Human feces	Metabolic reconstruction
Bacteria	Bacteroidetes	129	Human feces; Human appendix biopsy; Human ; Human stool; Human saliva; Human gastric fluid; Human urine; Human subgingival plaque; Human supragingival plaque	Metabolic reconstruction
Bacteria	Synergistetes	4	Human feces	Metabolic reconstruction
Bacteria	Spirochaetes	8	Human feces; Human	Metabolic reconstruction
Archaea	Thaumarchaeota	1		Metabolic reconstruction
Bacteria	Fusobacteria	20	Human feces; Human	Metabolic reconstruction
Archaea	Euryarchaeota	5		Metabolic reconstruction
Bacteria	Candidatus melainabacteria	1	Human feces	Metabolic reconstruction
Bacteria	Tenericutes	4	Human feces	Metabolic reconstruction
Bacteria	Planctomycetes	2	Human feces	Metabolic reconstruction
Archaea	Crenarchaeota	1		Metabolic reconstruction
Viruses/Bamfordvirae	Nucleocytoviricota	22
Bacteria	Cyanobacteria	6
Viruses/Bamfordvirae	Preplasmiviricota	3
Archaea/Archaea	Crenarchaeota	15		Metabolic reconstruction
Viruses/Heunggongvirae	Peploviricota	24	Human saliva
Eukaryota/Fungi	Microsporidia	2
Bacteria	Aquificae	2
Archaea/Archaea	Euryarchaeota	21		Metabolic reconstruction
Eukaryota/Fungi	Ascomycota	11	Human feces; Human saliva	Unknown
Viruses/Heunggongvirae	Uroviricota	1
Bacteria	Chlamydiae	10	Human ; Sheep ; Cat
Bacteria	Chlorobi	11
Bacteria	Dictyoglomi	2
Bacteria/NULL	Proteobacteria	1	Human feces; Human sputum; Human ; Human unknown; Pig ; Human pleural fluid plaque; Human dental plaque; Human nasal swab; Human stool; Human feces; pleural fluid plaque; bal; Cattle ; River trout ; Turkey ; Dog ; Lion ; Chicken ; American dog tick	Unknown; Metabolic reconstruction
Viruses/Heunggongvirae	Taleaviricota	1
Bacteria	Acidobacteria	3
Viruses/Pararnavirae	Artverviricota	15
Bacteria	Chloroflexi	6
Bacteria	Gemmatimonadetes	1
Archaea/Archaea	Korarchaeota	1

Exposure Sources

Source Type	Species	Data Source	Reference
Animal	Chondrus crispus	FooDB	31437929
Animal	Laminaria	FooDB	31437929
Animal	Haliotis	FooDB	31437929
Animal	Strombidae	FooDB	31437929
Animal	Clupea harengus harengus	FooDB	31437929
Animal	Undaria pinnatifida	FooDB	31437929
Animal	Peprilus triacanthus	FooDB	31437929
Animal	Rhodophyta	FooDB	31437929
Animal	Myoxocephalus	FooDB	31437929
Animal	Eucheuma	FooDB	31437929
Animal	Saccharina japonica	FooDB	31437929
Animal	Spirulina	FooDB	31437929
Animal	Lota lota	FooDB	31437929
Animal	Porphyra umbilicalis	FooDB	31437929
Plant	Prunus dulcis	FooDB	31437929
Plant	Hyssopus officinalis	FooDB	31437929
Plant	Manihot esculenta	FooDB	31437929
Plant	Beta vulgaris ssp. cicla	FooDB	31437929
Plant	Scorzonera hispanica	FooDB	31437929
Plant	Vigna unguiculata ssp. sesquipedalis	FooDB	31437929
Plant	Angelica keiskei	FooDB	31437929
Plant	Ipomoea aquatica	FooDB	31437929
Plant	Musa x paradisiaca	FooDB	31437929
Plant	Cuminum cyminum	FooDB	31437929
Plant	Rubus spectabilis	FooDB	31437929
Plant	Allium sativum	FooDB	31437929
Plant	Arachis hypogaea	FooDB	31437929
Plant	Rubus idaeus	FooDB	31437929
Plant	Cantharellus cibarius	FooDB	31437929
Plant	Sinapis alba	FooDB	31437929
Plant	Fragaria x ananassa	FooDB	31437929
Plant	Pyrus communis	FooDB	31437929
Plant	Brassica ruvo	FooDB	31437929
Plant	Apium graveolens var. secalinum	FooDB	31437929
Plant	Morus nigra	FooDB	31437929
Plant	Solanum lycopersicum	FooDB	31437929
Plant	Abelmoschus esculentus	FooDB	31437929
Plant	Moringa oleifera	FooDB	31437929
Plant	Pinus edulis	FooDB	31437929
Plant	Passiflora edulis	FooDB	31437929
Plant	Opuntia macrorhiza	FooDB	31437929
Plant	Vigna angularis	FooDB	31437929
Plant	Manilkara zapota	FooDB	31437929
Plant	Cucurbita pepo var. clypeata	FooDB	31437929
Plant	Helianthus annuus	FooDB	31437929
Plant	Mentha spicata	FooDB	31437929
Plant	Corylus	FooDB	31437929
Plant	Malus	FooDB	31437929
Plant	Pisum sativum	FooDB	31437929
Plant	Sambucus nigra	FooDB	31437929
Plant	Allium cepa	FooDB	31437929
Plant	Juglans	FooDB	31437929
Plant	Mangifera indica	FooDB	31437929
Plant	Petroselinum crispum	FooDB	31437929
Plant	Ribes nigrum	FooDB	31437929
Plant	Zingiber officinale	FooDB	31437929
Plant	Chamaemelum nobile	FooDB	31437929
Plant	Illicium verum	FooDB	31437929
Plant		FooDB	31437929
Plant	Laurus nobilis	FooDB	31437929
Plant	Auricularia auricula-judae	FooDB	31437929
Plant	Attalea speciosa	FooDB	31437929
Plant	Juglans ailanthifolia	FooDB	31437929
Plant	Melissa officinalis	FooDB	31437929
Plant	Hippophae rhamnoides	FooDB	31437929
Plant	Polygonum alpinum	FooDB	31437929
Plant	Brassica juncea	FooDB	31437929
Plant	Pediomelum esculentum	FooDB	31437929
Plant	Spinacia oleracea	FooDB	31437929
Plant	Auricularia polytricha	FooDB	31437929
Plant	Camellia oleifera	FooDB	31437929
Plant	Vaccinium corymbosum	FooDB	31437929
Plant	Chrysanthemum coronarium	FooDB	31437929
Plant	Eleocharis dulcis	FooDB	31437929
Plant	Thymus vulgaris	FooDB	31437929
Plant	Actinidia chinensis	FooDB	31437929
Plant	Carica papaya	FooDB	31437929
Plant	Pimenta dioica	FooDB	31437929
Plant	Medicago sativa	FooDB	31437929
Plant	Vigna mungo	FooDB	31437929
Plant	Rubus arcticus	FooDB	31437929
Plant	Agaricus bisporus	FooDB	31437929
Plant	Cajanus cajan	FooDB	31437929
Plant	Rumex articus	FooDB	31437929
Plant	Origanum majorana	FooDB	31437929
Plant	Armoracia rusticana	FooDB	31437929
Plant	Hibiscus sabdariffa	FooDB	31437929
Plant	Benincasa hispida	FooDB	31437929
Plant	Prunus persica	FooDB	31437929
Plant	Canarium ovatum	FooDB	31437929
Plant	Ribes aureum var. villosum	FooDB	31437929
Plant	Cucurbita pepo var. cylindrica	FooDB	31437929
Plant	Brassica oleracea var. gemmifera	FooDB	31437929
Plant	Foeniculum vulgare	FooDB	31437929
Plant	Phoenix dactylifera	FooDB	31437929
Plant	Vaccinium macrocarpon	FooDB	31437929
Plant	Arctium lappa	FooDB	31437929
Plant	Brassica oleracea var. gongylodes	FooDB	31437929
Plant		FooDB	31437929
Plant	Juglans cinerea	FooDB	31437929
Plant	Prunus cerasus	FooDB	31437929
Plant	Eruca vesicaria ssp. sativa	FooDB	31437929
Plant	Rosmarinus officinalis	FooDB	31437929
Plant	Artocarpus altilis	FooDB	31437929
Plant	Citrus x paradisi	FooDB	31437929
Plant	Vigna unguiculata	FooDB	31437929
Plant	Cynara scolymus	FooDB	31437929
Plant	Cyathea	FooDB	31437929
Plant	Metroxylon sagu	FooDB	31437929
Plant	Vitis rotundifolia	FooDB	31437929
Plant	Brosimum alicastrum	FooDB	31437929
Plant	Ficus carica	FooDB	31437929
Plant	Lentinus edodes	FooDB	31437929
Plant	Psidium cattleianum	FooDB	31437929
Plant	Beta vulgaris var. rubra	FooDB	31437929
Plant	Castanea mollissima	FooDB	31437929
Plant	Lepidium sativum	FooDB	31437929
Plant	Morus	FooDB	31437929
Plant	Helianthus tuberosus	FooDB	31437929
Plant	Phytolacca americana	FooDB	31437929
Plant	Grifola frondosa	FooDB	31437929
Plant	Vitis labrusca	FooDB	31437929
Plant	Tetragonia tetragonioides	FooDB	31437929
Plant	Artemisia vulgaris	FooDB	31437929
Plant	Cucumis metuliferus	FooDB	31437929
Plant	Nephelium lappaceum	FooDB	31437929
Plant	Myrica	FooDB	31437929
Plant	Castanea crenata	FooDB	31437929
Plant		FooDB	31437929
Plant	Corylus avellana	FooDB	31437929
Plant	Litchi chinensis	FooDB	31437929
Plant	Juglans regia	FooDB	31437929
Plant	Quercus	FooDB	31437929
Plant	Trigonella foenum-graecum	FooDB	31437929
Plant	Vaccinium angustifolium	FooDB	31437929
Plant	Malpighia emarginata	FooDB	31437929
Plant	Physalis	FooDB	31437929
Plant	Brassica oleracea var. sabauda	FooDB	31437929
Plant	Thelesperma	FooDB	31437929
Plant	Brassica napus	FooDB	31437929
Plant	Asparagus officinalis	FooDB	31437929
Plant	Chamerion angustifolium	FooDB	31437929
Plant	Levisticum officinale	FooDB	31437929
Plant	Pimpinella anisum	FooDB	31437929
Plant	Vaccinium elliottii	FooDB	31437929
Plant	Artemisia dracunculus	FooDB	31437929
Plant	Matricaria recutita	FooDB	31437929
Plant	Citrus aurantiifolia	FooDB	31437929
Plant	Ziziphus zizyphus	FooDB	31437929
Plant	Lactuca sativa	FooDB	31437929
Plant	Dimocarpus longan	FooDB	31437929
Plant	Eragrostis tef	FooDB	31437929
Plant	Salvia hispanica	FooDB	31437929
Plant	Pistacia vera	FooDB	31437929
Plant	Cynara cardunculus	FooDB	31437929
Plant	Vitellaria paradoxa	FooDB	31437929
Plant	Pangium edule	FooDB	31437929
Plant	Malus pumila	FooDB	31437929
Plant	Allium	FooDB	31437929
Plant	Brassica oleracea var. viridis	FooDB	31437929
Plant	Punica granatum	FooDB	31437929
Plant	Agave	FooDB	31437929
Plant	Hedysarum alpinum	FooDB	31437929
Plant	Diospyros	FooDB	31437929
Plant	Vigna aconitifolia	FooDB	31437929
Plant	Amaranthus	FooDB	31437929
Plant	Gossypium	FooDB	31437929
Plant		FooDB	31437929
Plant	Beta vulgaris	FooDB	31437929
Plant	Mammea americana	FooDB	31437929
Plant	Brassica alboglabra	FooDB	31437929
Plant	Annona squamosa	FooDB	31437929
Plant	Apium graveolens var. dulce	FooDB	31437929
Plant	Vitis	FooDB	31437929
Plant	Xanthosoma sagittifolium	FooDB	31437929
Plant	Basella alba	FooDB	31437929
Plant	Cucumis sativus	FooDB	31437929
Plant	Citrus latifolia	FooDB	31437929
Plant	Carya illinoinensis	FooDB	31437929
Plant	Capsicum baccatum var. baccatum	FooDB	31437929
Plant	Byrsonima crassifolia	FooDB	31437929
Plant	Capsicum pubescens	FooDB	31437929
Plant	Cinnamomum aromaticum	FooDB	31437929
Plant	Ribes rubrum	FooDB	31437929
Plant	Crateva religiosa	FooDB	31437929
Plant		FooDB	31437929
Plant	Vitis aestivalis	FooDB	31437929
Plant	Brassica rapa var. chinensis	FooDB	31437929
Plant	Eugenia javanica	FooDB	31437929
Plant	Portulaca oleracea	FooDB	31437929
Plant	Ipomoea batatas	FooDB	31437929
Plant	Mentha arvensis	FooDB	31437929
Plant	Pastinaca sativa	FooDB	31437929
Plant	Cucurbita maxima	FooDB	31437929
Plant	Vaccinium stamineum	FooDB	31437929
Plant	Solanum lycopersicum var. cerasiforme	FooDB	31437929
Plant	Chenopodium album	FooDB	31437929
Plant	Psophocarpus tetragonolobus	FooDB	31437929
Plant	Allium ampeloprasum	FooDB	31437929
Plant	Brassica oleracea	FooDB	31437929
Plant	Sechium edule	FooDB	31437929
Plant	Lactuca sativa l. var. longifolia	FooDB	31437929
Plant	Grataegosorbus mitschurinii	FooDB	31437929
Plant	Diospyros virginiana	FooDB	31437929
Plant	Origanum x majoricum	FooDB	31437929
Plant	Rubus x loganobaccus	FooDB	31437929
Plant	Tragopogon porrifolius	FooDB	31437929
Plant	Taraxacum officinale	FooDB	31437929
Plant	Rumex	FooDB	31437929
Plant	Allium ascalonicum	FooDB	31437929
Plant	Curcuma longa	FooDB	31437929
Plant	Rubus chamaemorus	FooDB	31437929
Plant	Elettaria cardamomum	FooDB	31437929
Plant	Citrullus lanatus var. fistulosus	FooDB	31437929
Plant	Ananas comosus	FooDB	31437929
Plant	Persea americana	FooDB	31437929
Plant	Amelanchier alnifolia	FooDB	31437929
Plant	Eugenia uniflora	FooDB	31437929
Plant	Annona reticulata	FooDB	31437929
Plant	Cichorium intybus	FooDB	31437929
Plant	Sesbania bispinosa	FooDB	31437929
Plant	Chenopodium quinoa	FooDB	31437929
Plant	Brassica oleracea var. botrytis	FooDB	31437929
Plant	Ribes x nidigrolaria	FooDB	31437929
Plant	Garcinia mangostana	FooDB	31437929
Plant	Cucumis melo	FooDB	31437929
Plant	Dioscorea pentaphylla	FooDB	31437929
Plant	Corchorus olitorius	FooDB	31437929
Plant	Juglans nigra	FooDB	31437929
Plant	Lathyrus sativus	FooDB	31437929
Plant	Allium tuberosum	FooDB	31437929
Plant	Cinnamomum verum	FooDB	31437929
Plant	Glycine max	FooDB	31437929
Plant	Gaylussacia baccata	FooDB	31437929
Plant	Petasites japonicus	FooDB	31437929
Plant	Prunus tomentosa	FooDB	31437929
Plant	Ocimum basilicum	FooDB	31437929
Plant	Mentha x piperita	FooDB	31437929
Plant	Maranta arundinacea	FooDB	31437929
Plant	Matteuccia struthiopteris	FooDB	31437929
Plant	Cucurbita moschata	FooDB	31437929
Plant	Macadamia	FooDB	31437929
Plant	Tilia	FooDB	31437929
Plant	Citrus limon	FooDB	31437929
Plant	Vaccinium myrtilloides	FooDB	31437929
Plant	Capsicum annuum var. annuum	FooDB	31437929
Plant	Apium graveolens var. rapaceum	FooDB	31437929
Plant	Papaver	FooDB	31437929
Plant	Rosa	FooDB	31437929
Plant	Nelumbo	FooDB	31437929
Plant	Brassica oleracea var. conica	FooDB	31437929
Plant	Sesamum orientale	FooDB	31437929
Plant	Annona cherimola	FooDB	31437929
Plant	Brassica rapa var. pekinensis	FooDB	31437929
Plant	Brassica rapa	FooDB	31437929
Plant	Lippia graveolens	FooDB	31437929
Plant	Prunus	FooDB	31437929
Plant	Capparis spinosa	FooDB	31437929
Plant	Citrus sinensis	FooDB	31437929
Plant	Lens culinaris	FooDB	31437929
Plant	Vaccinium deliciosum	FooDB	31437929
Plant	Phaseolus lunatus	FooDB	31437929
Plant	Artocarpus heterophyllus	FooDB	31437929
Plant	Prunus virginiana	FooDB	31437929
Plant	Musa acuminata	FooDB	31437929
Plant	Citrullus lanatus	FooDB	31437929
Plant	Linum usitatissimum	FooDB	31437929
Plant	Vigna unguiculata ssp. unguiculata	FooDB	31437929
Plant	Macadamia tetraphylla	FooDB	31437929
Plant	Phyllostachys edulis	FooDB	31437929
Plant	Lagenaria siceraria	FooDB	31437929
Plant	Prunus domestica	FooDB	31437929
Plant	Prunus armeniaca	FooDB	31437929
Plant	Carum carvi	FooDB	31437929
Plant	Allium schoenoprasum	FooDB	31437929
Plant	Carissa macrocarpa	FooDB	31437929
Plant	Citrus reticulata	FooDB	31437929
Plant	Satureja hortensis	FooDB	31437929
Plant	Averrhoa carambola	FooDB	31437929
Plant	Brassica rapa var. rapa	FooDB	31437929
Plant	Sorbus aucuparia	FooDB	31437929
Plant	Anethum graveolens	FooDB	31437929
Plant	Nelumbo nucifera	FooDB	31437929
Plant	Coriandrum sativum	FooDB	31437929
Plant	Bertholletia excelsa	FooDB	31437929
Plant	Brassica oleracea var. costata	FooDB	31437929
Plant	Panax	FooDB	31437929
Plant	Ceratonia siliqua	FooDB	31437929
Plant	Cymbopogon citratus	FooDB	31437929
Plant	Luffa aegyptiaca	FooDB	31437929
Plant	Anacardium occidentale	FooDB	31437929
Plant	Carthamus tinctorius	FooDB	31437929
Plant	Rubus occidentalis	FooDB	31437929
Plant	Vigna umbellata	FooDB	31437929
Plant	Cicer arietinum	FooDB	31437929
Plant	Allium fistulosum	FooDB	31437929
Plant	Capsicum	FooDB	31437929
Plant	Vaccinium alaskaense	FooDB	31437929
Plant	Lupinus	FooDB	31437929
Plant	Tilia cordata	FooDB	31437929
Plant	Prunus persica var. nucipersica	FooDB	31437929
Plant	Camellia sinensis	FooDB	31437929
Plant	Durio zibethinus	FooDB	31437929
Plant	Eriobotrya japonica	FooDB	31437929
Plant	Solanum lycopersicum var. lycopersicum	FooDB	31437929
Plant	Brassica napus var. pabularia	FooDB	31437929
Plant	Oenothera biennis	FooDB	31437929
Plant	Diospyros kaki	FooDB	31437929
Plant	Ribes glandulosum	FooDB	31437929
Plant	Virola surinamensis	FooDB	31437929
Plant	Verbena officinalis	FooDB	31437929
Plant	Phaseolus vulgaris	FooDB	31437929
Plant	Theobroma cacao	FooDB	31437929
Plant	Daucus carota ssp. sativus	FooDB	31437929
Plant	Vaccinium oxycoccos	FooDB	31437929
Plant	Rumex acetosa	FooDB	31437929
Plant	Syzygium aromaticum	FooDB	31437929
Plant	Pyrus pyrifolia	FooDB	31437929
Plant	Vaccinium myrtillus	FooDB	31437929
Plant	Vaccinium parvifolium	FooDB	31437929
Plant	Aloysia triphylla	FooDB	31437929
Plant	Brassica oleracea var. capitata	FooDB	31437929
Plant	Capsicum chinense	FooDB	31437929
Plant	Vicia faba	FooDB	31437929
Plant	Vaccinium reticulatum	FooDB	31437929
Plant	Solanum quitoense	FooDB	31437929
Plant	Ginkgo biloba	FooDB	31437929
Plant	Theobroma grandiflorum	FooDB	31437929
Plant	Vigna unguiculata ssp. cylindrica	FooDB	31437929
Plant	Flammulina velutipes	FooDB	31437929
Plant	Satureja montana	FooDB	31437929
Plant		FooDB	31437929
Plant	Vitis vinifera	FooDB	31437929
Plant	Citrus japonica	FooDB	31437929
Plant	Prunus avium	FooDB	31437929
Plant	Perideridia oregana	FooDB	31437929
Plant	Vaccinium arboreum	FooDB	31437929
Plant	Pouteria sapota	FooDB	31437929
Plant	Wasabia japonica	FooDB	31437929
Plant	Piper nigrum	FooDB	31437929
Plant	Origanum onites	FooDB	31437929
Plant	Capsicum annuum	FooDB	31437929
Plant	Origanum vulgare	FooDB	31437929
Plant	Viburnum edule	FooDB	31437929
Plant	Dioscorea	FooDB	31437929
Plant	Brassica oleracea var. italica	FooDB	31437929
Plant	Momordica charantia	FooDB	31437929
Plant	Vaccinium uliginosum	FooDB	31437929
Plant	Castanea	FooDB	31437929
Plant	Rubus ursinus x idaeus	FooDB	31437929
Plant	Pleurotus ostreatus	FooDB	31437929
Plant	Cirsium	FooDB	31437929
Plant	Solanum melongena	FooDB	31437929
Plant	Opuntia	FooDB	31437929
Plant	Raphanus sativus var. sativus	FooDB	31437929
Plant	Colocasia esculenta	FooDB	31437929
Plant	Prunus persica var. persica	FooDB	31437929
Plant	Anthriscus cerefolium	FooDB	31437929
Plant	Nuphar lutea	FooDB	31437929
Plant	Myristica fragrans	FooDB	31437929
Plant	Pachyrhizus erosus	FooDB	31437929
Plant	Lupinus albus	FooDB	31437929
Plant	Cichorium endivia	FooDB	31437929
Plant	Apium graveolens	FooDB	31437929
Plant	Elaeis	FooDB	31437929
Plant	Cinnamomum	FooDB	31437929
Plant	Ribes uva-crispa	FooDB	31437929
Plant	Feijoa sellowiana	FooDB	31437929
Plant	Dysphania ambrosioides	FooDB	31437929
Plant	Raphanus sativus var. niger	FooDB	31437929
Plant	Photinia melanocarpa	FooDB	31437929
Plant	Salvia officinalis	FooDB	31437929
Plant	Rheum rhabarbarum	FooDB	31437929
Plant	Vaccinium	FooDB	31437929
Plant	Lablab purpureus	FooDB	31437929
Plant	Crocus sativus	FooDB	31437929
Plant	Citrus maxima	FooDB	31437929
Plant	Syzygium jambos	FooDB	31437929
Plant	Salix pulchra	FooDB	31437929
Plant	Castanea sativa	FooDB	31437929
Plant	Cydonia oblonga	FooDB	31437929
Plant	Annona muricata	FooDB	31437929
Plant	Fagus	FooDB	31437929
Plant	Cucurbita	FooDB	31437929
Plant	Opuntia cochenillifera	FooDB	31437929
Plant	Vaccinium ovatum	FooDB	31437929
Plant	Cocos nucifera	FooDB	31437929
Plant	Phaseolus coccineus	FooDB	31437929
Plant	Thymus pulegioides	FooDB	31437929
Plant	Tamarindus indica	FooDB	31437929
Plant	Mespilus germanica	FooDB	31437929
Plant	Brassica rapa var. perviridis	FooDB	31437929
Plant	Cucurbita pepo var. cylindrica	FooDB	31437929
Plant	Mentha aquatica	FooDB	31437929
Plant	Salvia elegans	FooDB	31437929
Plant	Mentha	FooDB	31437929
Plant	Sagittaria latifolia	FooDB	31437929
Plant	Solanum tuberosum	FooDB	31437929
Plant	Olea europaea	FooDB	31437929
Plant	Sambucus	FooDB	31437929
Plant	Pinus	FooDB	31437929
Plant	Psidium guajava	FooDB	31437929
Plant	Syzygium cumini	FooDB	31437929
Plant	Tilia tomentosa	FooDB	31437929
Plant	Typha angustifolia	FooDB	31437929
Plant	Daucus carota	FooDB	31437929
Plant	Empetrum nigrum	FooDB	31437929
Plant	Valerianella locusta	FooDB	31437929
Plant	Myrica rubra	FooDB	31437929
Plant	Vaccinium vitis-idaea	FooDB	31437929
Plant	Vaccinium angustifolium x vaccinium corymbosum	FooDB	31437929
Plant	Sisymbrium	FooDB	31437929
Plant	Vanilla	FooDB	31437929
Plant	Carya	FooDB	31437929
Plant	Brassica oleracea l. var. capitata l. f. alba dc.	FooDB	31437929
Plant	Physalis philadelphica var. immaculata	FooDB	31437929
Plant	Vigna radiata	FooDB	31437929
Plant	Borago officinalis	FooDB	31437929
Plant	Raphanus sativus	FooDB	31437929

Host Biospecimen and Location

Host and Biospecimen	Status	Mean	Min	Max	Units	Age	Sex	Health Condition	Data Source	Reference
Human Feces	Detected but not Quantified								HMDB
Human Prostate tissue	Detected and Quantified	0.5	0.0	1.0	umol/g tissue	Adult (>18 years old)	Both	Prostate cancer	HMDB	19212411
Human Epidermis	Detected but not Quantified					Not Specified	Not Specified	Normal	HMDB	34986597
Human Prostate	Detected but not Quantified					Not Specified	Not Specified	Normal	HMDB	34986597
Human Skeletal muscle	Detected but not Quantified					Not Specified	Not Specified	Normal	HMDB	34986597
Human Spleen	Detected but not Quantified					Not Specified	Not Specified	Normal	HMDB	34986597

External Links

HMDB ID

HMDB0001191

DrugBank ID

DB02333

Phenol Explorer Compound ID

Not Available

FooDB ID

KNApSAcK ID

Chemspider ID

KEGG Compound ID

BioCyc ID

BiGG ID

Wikipedia Link

Not Available

METLIN ID

6069

PubChem Compound

65070

PDB ID

Not Available

ChEBI ID

17625

Food Biomarker Ontology

Not Available

References

Synthesis Reference

Not Available

General References

Oosterhuis GJ, Mulder AB, Kalsbeek-Batenburg E, Lambalk CB, Schoemaker J, Vermes I: Measuring apoptosis in human spermatozoa: a biological assay for semen quality? Fertil Steril. 2000 Aug;74(2):245-50. doi: 10.1016/s0015-0282(00)00623-3. [PubMed:10927039 ]
Ge YF, Huang YF, Zhang GY, Wang XH, Xu JP: Studies on apoptosis of spermatogenic cells in normal fertile men treated with supraphysiological doses of testosterone undecanoate. Asian J Androl. 1999 Sep;1(3):155-8. [PubMed:11250785 ]
Webley SD, Welsh SJ, Jackman AL, Aherne GW: The ability to accumulate deoxyuridine triphosphate and cellular response to thymidylate synthase (TS) inhibition. Br J Cancer. 2001 Aug 3;85(3):446-52. doi: 10.1054/bjoc.2001.1921. [PubMed:11487279 ]
Igarashi T, Brown CR, Byrum RA, Nishimura Y, Endo Y, Plishka RJ, Buckler C, Buckler-White A, Miller G, Hirsch VM, Martin MA: Rapid and irreversible CD4+ T-cell depletion induced by the highly pathogenic simian/human immunodeficiency virus SHIV(DH12R) is systemic and synchronous. J Virol. 2002 Jan;76(1):379-91. doi: 10.1128/jvi.76.1.379-391.2002. [PubMed:11739702 ]
Russell J, O'Donoghue JA, Finn R, Koziorowski J, Ruan S, Humm JL, Ling CC: Iodination of annexin V for imaging apoptosis. J Nucl Med. 2002 May;43(5):671-7. [PubMed:11994533 ]
Gilhar A, Ullmann Y, Karry R, Shalaginov R, Assy B, Serafimovich S, Kalish RS: Ageing of human epidermis: the role of apoptosis, Fas and telomerase. Br J Dermatol. 2004 Jan;150(1):56-63. doi: 10.1111/j.1365-2133.2004.05715.x. [PubMed:14746617 ]
Lee AY, Youm YH, Kim NH, Yang H, Choi WI: Keratinocytes in the depigmented epidermis of vitiligo are more vulnerable to trauma (suction) than keratinocytes in the normally pigmented epidermis, resulting in their apoptosis. Br J Dermatol. 2004 Nov;151(5):995-1003. doi: 10.1111/j.1365-2133.2004.06136.x. [PubMed:15541077 ]
Lamperti C, Naini AB, Lucchini V, Prelle A, Bresolin N, Moggio M, Sciacco M, Kaufmann P, DiMauro S: Muscle coenzyme Q10 level in statin-related myopathy. Arch Neurol. 2005 Nov;62(11):1709-12. doi: 10.1001/archneur.62.11.1709. [PubMed:16286544 ]
Sreekumar A, Poisson LM, Rajendiran TM, Khan AP, Cao Q, Yu J, Laxman B, Mehra R, Lonigro RJ, Li Y, Nyati MK, Ahsan A, Kalyana-Sundaram S, Han B, Cao X, Byun J, Omenn GS, Ghosh D, Pennathur S, Alexander DC, Berger A, Shuster JR, Wei JT, Varambally S, Beecher C, Chinnaiyan AM: Metabolomic profiles delineate potential role for sarcosine in prostate cancer progression. Nature. 2009 Feb 12;457(7231):910-4. doi: 10.1038/nature07762. [PubMed:19212411 ]

Showing metabocard for Deoxyuridine triphosphate (MMDBc0029583)

MOL for #<Metabolite:0x00007fe2d415ec30>

3D MOL for #<Metabolite:0x00007fe2d415ec30>

3D SDF for #<Metabolite:0x00007fe2d415ec30>

3D-SDF for #<Metabolite:0x00007fe2d415ec30>

PDB for #<Metabolite:0x00007fe2d415ec30>

3D PDB for #<Metabolite:0x00007fe2d415ec30>

SMILES for #<Metabolite:0x00007fe2d415ec30>

INCHI for #<Metabolite:0x00007fe2d415ec30>

Structure for #<Metabolite:0x00007fe2d415ec30>

3D Structure for #<Metabolite:0x00007fe2d415ec30>